RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 SPRR2AP35326 72 aa5.83□□□□□ -1.48
RPAIN-209ENST00000571558 SPRR2FQ96RM1 72 aa5.82□□□□□ -1.48
RPAIN-209ENST00000571558 KRTAP12-1P59990 96 aa5.81□□□□□ -1.48
RPAIN-209ENST00000571558 PLAC4Q8WY50 150 aa5.81□□□□□ -1.48
RPAIN-209ENST00000571558 KRTAP12-2P59991 146 aa5.77□□□□□ -1.49
RPAIN-209ENST00000571558 SPINT4Q6UDR6 99 aa5.74□□□□□ -1.49
RPAIN-209ENST00000571558 LCE1AQ5T7P2 110 aa5.72□□□□□ -1.49
RPAIN-209ENST00000571558 K7ERS5 55 aa5.71□□□□□ -1.5
RPAIN-209ENST00000571558 MT1XP80297 61 aa5.71□□□□□ -1.5
RPAIN-209ENST00000571558 PMAIP1Q13794 54 aa5.71□□□□□ -1.5
RPAIN-209ENST00000571558 SPRR2DP22532 72 aa5.65□□□□□ -1.5
RPAIN-209ENST00000571558 KRTAP8-1Q8IUC2 63 aa5.65□□□□□ -1.5
RPAIN-209ENST00000571558 PRO2289Q9P1D8 64 aa5.65□□□□□ -1.5
RPAIN-209ENST00000571558 CAMK2N1Q7Z7J9 78 aa5.65□□□□□ -1.51
RPAIN-209ENST00000571558 GPR98Q8WXG9 6306 aa5.64□□□□□ -1.51
RPAIN-209ENST00000571558 C10orf95Q9H7T3 257 aa5.51□□□□□ -1.53
RPAIN-209ENST00000571558 KTN1-AS1Q86SY8 53 aa5.49□□□□□ -1.53
RPAIN-209ENST00000571558 KRTAP15-1Q3LI76 137 aa5.48□□□□□ -1.53
RPAIN-209ENST00000571558 KRTAP10-7P60409 375 aaPredicted RBP5.45□□□□□ -1.54
RPAIN-209ENST00000571558 ROMO1P60602 79 aa5.44□□□□□ -1.54
RPAIN-209ENST00000571558 KRTAP10-12P60413 245 aa5.41□□□□□ -1.54
RPAIN-209ENST00000571558 DSTQ03001 7570 aaKnown RBP5.41□□□□□ -1.54
RPAIN-209ENST00000571558 TNP1P09430 55 aa5.34□□□□□ -1.55
RPAIN-209ENST00000571558 KRTAP25-1Q3LHN0 102 aa5.31□□□□□ -1.56
RPAIN-209ENST00000571558 PRAC1Q96KF2 57 aa5.25□□□□□ -1.57
RPAIN-209ENST00000571558 LCE3AQ5TA76 89 aa5.2□□□□□ -1.58
RPAIN-209ENST00000571558 KRTAP19-7Q3SYF9 63 aa5.1□□□□□ -1.59
RPAIN-209ENST00000571558 HMCN1Q96RW7 5635 aa5.09□□□□□ -1.6
RPAIN-209ENST00000571558 PP632Q6XCG6 107 aa5.08□□□□□ -1.6
RPAIN-209ENST00000571558 KRTAP19-5Q3LI72 72 aa5.07□□□□□ -1.6
RPAIN-209ENST00000571558 MT1EP04732 61 aa5.02□□□□□ -1.61
RPAIN-209ENST00000571558 KRTAP19-3Q7Z4W3 81 aa5.01□□□□□ -1.61
RPAIN-209ENST00000571558 AHNAK2Q8IVF2 5795 aa5□□□□□ -1.61
RPAIN-209ENST00000571558 KRTAP12-3P60328 96 aa4.99□□□□□ -1.61
RPAIN-209ENST00000571558 KRTAP5-10Q6L8G5 202 aa4.99□□□□□ -1.61
RPAIN-209ENST00000571558 MT4P47944 62 aa4.95□□□□□ -1.62
RPAIN-209ENST00000571558 MT1GP13640 62 aa4.89□□□□□ -1.63
RPAIN-209ENST00000571558 KRTAP5-7Q6L8G8 165 aa4.89□□□□□ -1.63
RPAIN-209ENST00000571558 MT1LQ93083 61 aa4.88□□□□□ -1.63
RPAIN-209ENST00000571558 KRTAP5-4Q6L8H1 288 aa4.82□□□□□ -1.64
RPAIN-209ENST00000571558 MT1MQ8N339 61 aa4.73□□□□□ -1.65
RPAIN-209ENST00000571558 LCE3CQ5T5A8 94 aa4.66□□□□□ -1.66
RPAIN-209ENST00000571558 SPRR5A0A1B0GTR4 108 aa4.63□□□□□ -1.67
RPAIN-209ENST00000571558 KRTAP4-3Q9BYR4 195 aa4.63□□□□□ -1.67
RPAIN-209ENST00000571558 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
RPAIN-209ENST00000571558 LUZP6Q538Z0 58 aa4.48□□□□□ -1.69
RPAIN-209ENST00000571558 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
RPAIN-209ENST00000571558 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
RPAIN-209ENST00000571558 KRTAP9-6A8MVA2 160 aa4.43□□□□□ -1.7
RPAIN-209ENST00000571558 KRTAP5-5Q701N2 237 aaPredicted RBP4.4□□□□□ -1.7
RPAIN-209ENST00000571558 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
RPAIN-209ENST00000571558 AHNAKQ09666 5890 aaKnown RBP4.34□□□□□ -1.72
RPAIN-209ENST00000571558 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
RPAIN-209ENST00000571558 MUC5ACP98088 5654 aa4.28□□□□□ -1.72
RPAIN-209ENST00000571558 MT3P25713 68 aa4.23□□□□□ -1.73
RPAIN-209ENST00000571558 MUC5BQ9HC84 5762 aaPredicted RBP4.22□□□□□ -1.73
RPAIN-209ENST00000571558 KRTAP5-11Q6L8G4 156 aa4.18□□□□□ -1.74
RPAIN-209ENST00000571558 KRTAP5-8O75690 187 aa4.15□□□□□ -1.74
RPAIN-209ENST00000571558 MT1AP04731 61 aa4.14□□□□□ -1.75
RPAIN-209ENST00000571558 KRTAP5-2Q701N4 177 aa4.13□□□□□ -1.75
RPAIN-209ENST00000571558 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
RPAIN-209ENST00000571558 OBSCNQ5VST9 7968 aa4.08□□□□□ -1.76
RPAIN-209ENST00000571558 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
RPAIN-209ENST00000571558 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
RPAIN-209ENST00000571558 KRTAP6-2Q3LI66 62 aa3.86□□□□□ -1.79
RPAIN-209ENST00000571558 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
RPAIN-209ENST00000571558 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
RPAIN-209ENST00000571558 INE1O15225 51 aa3.61□□□□□ -1.83
RPAIN-209ENST00000571558 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
RPAIN-209ENST00000571558 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
RPAIN-209ENST00000571558 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
RPAIN-209ENST00000571558 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
RPAIN-209ENST00000571558 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
RPAIN-209ENST00000571558 PRM1P04553 51 aa2.8□□□□□ -1.96
RPAIN-209ENST00000571558 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
RPAIN-209ENST00000571558 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
RPAIN-209ENST00000571558 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
RPAIN-209ENST00000571558 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 53.9 ms