RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 LINC01554Q52M75 96 aa3.92□□□□□ -1.78
CTDNEP1-202ENST00000570380 COA5Q86WW8 74 aa3.92□□□□□ -1.78
CTDNEP1-202ENST00000570380 DMAC1Q96GE9 116 aa3.92□□□□□ -1.78
CTDNEP1-202ENST00000570380 MT1EP04732 61 aa3.9□□□□□ -1.79
CTDNEP1-202ENST00000570380 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
CTDNEP1-202ENST00000570380 PRR15LQ9BU68 103 aa3.88□□□□□ -1.79
CTDNEP1-202ENST00000570380 KRTAP5-4Q6L8H1 288 aa3.87□□□□□ -1.79
CTDNEP1-202ENST00000570380 Q1T7F1 81 aa3.84□□□□□ -1.79
CTDNEP1-202ENST00000570380 MT1GP13640 62 aa3.82□□□□□ -1.8
CTDNEP1-202ENST00000570380 A0A1B0GU69 56 aa3.79□□□□□ -1.8
CTDNEP1-202ENST00000570380 LINC01558Q9Y6Z2 57 aa3.77□□□□□ -1.81
CTDNEP1-202ENST00000570380 PSPHP1O15172 72 aa3.76□□□□□ -1.81
CTDNEP1-202ENST00000570380 PP632Q6XCG6 107 aa3.76□□□□□ -1.81
CTDNEP1-202ENST00000570380 MT1MQ8N339 61 aa3.75□□□□□ -1.81
CTDNEP1-202ENST00000570380 A6NED7 52 aa3.74□□□□□ -1.81
CTDNEP1-202ENST00000570380 BRK1Q8WUW1 75 aa3.73□□□□□ -1.81
CTDNEP1-202ENST00000570380 PRO0628Q9UI54 55 aa3.73□□□□□ -1.81
CTDNEP1-202ENST00000570380 KRTAP4-3Q9BYR4 195 aa3.71□□□□□ -1.82
CTDNEP1-202ENST00000570380 KRTAP19-5Q3LI72 72 aa3.69□□□□□ -1.82
CTDNEP1-202ENST00000570380 UQCR11O14957 56 aa3.68□□□□□ -1.82
CTDNEP1-202ENST00000570380 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
CTDNEP1-202ENST00000570380 MT1LQ93083 61 aa3.65□□□□□ -1.83
CTDNEP1-202ENST00000570380 CDC42SE1Q9NRR8 79 aa3.64□□□□□ -1.83
CTDNEP1-202ENST00000570380 PRAC1Q96KF2 57 aa3.63□□□□□ -1.83
CTDNEP1-202ENST00000570380 MIR22HGQ0VDD5 57 aa3.62□□□□□ -1.83
CTDNEP1-202ENST00000570380 KRTAP13-4Q3LI77 160 aa3.62□□□□□ -1.83
CTDNEP1-202ENST00000570380 K7ERS5 55 aa3.61□□□□□ -1.83
CTDNEP1-202ENST00000570380 KRTAP19-4Q3LI73 84 aa3.6□□□□□ -1.83
CTDNEP1-202ENST00000570380 A0A1B0GU33 70 aa3.59□□□□□ -1.83
CTDNEP1-202ENST00000570380 A0A0D9SG42 100 aa3.58□□□□□ -1.84
CTDNEP1-202ENST00000570380 PMAIP1Q13794 54 aa3.58□□□□□ -1.84
CTDNEP1-202ENST00000570380 CAMK2N1Q7Z7J9 78 aa3.58□□□□□ -1.84
CTDNEP1-202ENST00000570380 AHNAKQ09666 5890 aaKnown RBP3.54□□□□□ -1.84
CTDNEP1-202ENST00000570380 SPATA8Q6RVD6 105 aa3.54□□□□□ -1.84
CTDNEP1-202ENST00000570380 SYNE1Q8NF91 8797 aaKnown RBP3.53□□□□□ -1.84
CTDNEP1-202ENST00000570380 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
CTDNEP1-202ENST00000570380 KRTAP12-4P60329 112 aa3.5□□□□□ -1.85
CTDNEP1-202ENST00000570380 KRTAP5-5Q701N2 237 aaPredicted RBP3.49□□□□□ -1.85
CTDNEP1-202ENST00000570380 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
CTDNEP1-202ENST00000570380 KRTAP12-1P59990 96 aa3.43□□□□□ -1.86
CTDNEP1-202ENST00000570380 A8MU10 97 aa3.42□□□□□ -1.86
CTDNEP1-202ENST00000570380 SPINT4Q6UDR6 99 aa3.42□□□□□ -1.86
CTDNEP1-202ENST00000570380 KRTAP5-8O75690 187 aa3.41□□□□□ -1.86
CTDNEP1-202ENST00000570380 KTN1-AS1Q86SY8 53 aa3.41□□□□□ -1.86
CTDNEP1-202ENST00000570380 C10orf95Q9H7T3 257 aa3.41□□□□□ -1.86
CTDNEP1-202ENST00000570380 LCE3AQ5TA76 89 aa3.36□□□□□ -1.87
CTDNEP1-202ENST00000570380 ROMO1P60602 79 aa3.31□□□□□ -1.88
CTDNEP1-202ENST00000570380 KRTAP5-2Q701N4 177 aa3.31□□□□□ -1.88
CTDNEP1-202ENST00000570380 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
CTDNEP1-202ENST00000570380 KRTAP15-1Q3LI76 137 aa3.25□□□□□ -1.89
CTDNEP1-202ENST00000570380 LUZP6Q538Z0 58 aa3.22□□□□□ -1.89
CTDNEP1-202ENST00000570380 KRTAP12-3P60328 96 aa3.21□□□□□ -1.9
CTDNEP1-202ENST00000570380 TNP1P09430 55 aa3.19□□□□□ -1.9
CTDNEP1-202ENST00000570380 NDUFAF8A1L188 74 aa3.18□□□□□ -1.9
CTDNEP1-202ENST00000570380 KRTAP25-1Q3LHN0 102 aa3.16□□□□□ -1.9
CTDNEP1-202ENST00000570380 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
CTDNEP1-202ENST00000570380 MT1AP04731 61 aa3.09□□□□□ -1.91
CTDNEP1-202ENST00000570380 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
CTDNEP1-202ENST00000570380 KRTAP5-1Q6L8H4 278 aa3.06□□□□□ -1.92
CTDNEP1-202ENST00000570380 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
CTDNEP1-202ENST00000570380 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
CTDNEP1-202ENST00000570380 MT3P25713 68 aa2.83□□□□□ -1.96
CTDNEP1-202ENST00000570380 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
CTDNEP1-202ENST00000570380 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
CTDNEP1-202ENST00000570380 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
CTDNEP1-202ENST00000570380 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
CTDNEP1-202ENST00000570380 LCE1CQ5T751 118 aa2.53□□□□□ -2
CTDNEP1-202ENST00000570380 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
CTDNEP1-202ENST00000570380 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
CTDNEP1-202ENST00000570380 INE1O15225 51 aa2.43□□□□□ -2.02
CTDNEP1-202ENST00000570380 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
CTDNEP1-202ENST00000570380 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
CTDNEP1-202ENST00000570380 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
CTDNEP1-202ENST00000570380 LCE3EQ5T5B0 92 aa2.06□□□□□ -2.08
CTDNEP1-202ENST00000570380 LCE3DQ9BYE3 92 aa2.04□□□□□ -2.08
CTDNEP1-202ENST00000570380 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
CTDNEP1-202ENST00000570380 PRM1P04553 51 aa1.7□□□□□ -2.14
CTDNEP1-202ENST00000570380 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 81.6 ms