RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 SPRR2EP22531 72 aa4.49□□□□□ -1.69
NUP93-220ENST00000569842 SPRR2BP35325 72 aa4.49□□□□□ -1.69
NUP93-220ENST00000569842 SPRR2AP35326 72 aa4.49□□□□□ -1.69
NUP93-220ENST00000569842 LCE1AQ5T7P2 110 aa4.48□□□□□ -1.69
NUP93-220ENST00000569842 NEBP20929 6669 aa4.44□□□□□ -1.7
NUP93-220ENST00000569842 KRTAP19-3Q7Z4W3 81 aa4.41□□□□□ -1.7
NUP93-220ENST00000569842 MT1LQ93083 61 aa4.41□□□□□ -1.7
NUP93-220ENST00000569842 LCE5AQ5TCM9 118 aa4.37□□□□□ -1.71
NUP93-220ENST00000569842 NDUFAF8A1L188 74 aa4.36□□□□□ -1.71
NUP93-220ENST00000569842 MT1GP13640 62 aa4.35□□□□□ -1.71
NUP93-220ENST00000569842 KRTAP15-1Q3LI76 137 aa4.35□□□□□ -1.71
NUP93-220ENST00000569842 SPRR2DP22532 72 aa4.33□□□□□ -1.72
NUP93-220ENST00000569842 MT1MQ8N339 61 aa4.29□□□□□ -1.72
NUP93-220ENST00000569842 KRTAP4-7Q9BYR0 210 aa4.24□□□□□ -1.73
NUP93-220ENST00000569842 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
NUP93-220ENST00000569842 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
NUP93-220ENST00000569842 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
NUP93-220ENST00000569842 LCE3CQ5T5A8 94 aa4.2□□□□□ -1.74
NUP93-220ENST00000569842 KRTAP20-1Q3LI63 56 aa4.19□□□□□ -1.74
NUP93-220ENST00000569842 KRTAP2-3P0C7H8 128 aa4.18□□□□□ -1.74
NUP93-220ENST00000569842 KRTAP2-4Q9BYR9 128 aa4.18□□□□□ -1.74
NUP93-220ENST00000569842 LCE3BQ5TA77 95 aa4.18□□□□□ -1.74
NUP93-220ENST00000569842 DSTQ03001 7570 aaKnown RBP4.17□□□□□ -1.74
NUP93-220ENST00000569842 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
NUP93-220ENST00000569842 KRTAP2-1Q9BYU5 128 aa4.08□□□□□ -1.76
NUP93-220ENST00000569842 LOC100996750A0A140TA64 210 aa4□□□□□ -1.77
NUP93-220ENST00000569842 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
NUP93-220ENST00000569842 LUZP6Q538Z0 58 aa3.93□□□□□ -1.78
NUP93-220ENST00000569842 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
NUP93-220ENST00000569842 KRTAP5-5Q701N2 237 aaPredicted RBP3.89□□□□□ -1.79
NUP93-220ENST00000569842 KRTAP5-4Q6L8H1 288 aa3.84□□□□□ -1.79
NUP93-220ENST00000569842 LCE4AQ5TA78 99 aa3.83□□□□□ -1.8
NUP93-220ENST00000569842 KRTAP4-9Q9BYQ8 210 aa3.8□□□□□ -1.8
NUP93-220ENST00000569842 MT4P47944 62 aa3.77□□□□□ -1.81
NUP93-220ENST00000569842 MT1AP04731 61 aa3.75□□□□□ -1.81
NUP93-220ENST00000569842 LCE1DQ5T752 114 aa3.75□□□□□ -1.81
NUP93-220ENST00000569842 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
NUP93-220ENST00000569842 KRTAP4-6Q9BYQ5 205 aa3.71□□□□□ -1.82
NUP93-220ENST00000569842 SYNE1Q8NF91 8797 aaKnown RBP3.7□□□□□ -1.82
NUP93-220ENST00000569842 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
NUP93-220ENST00000569842 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
NUP93-220ENST00000569842 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
NUP93-220ENST00000569842 KRTAP9-4Q9BYQ2 154 aa3.58□□□□□ -1.84
NUP93-220ENST00000569842 KRTAP5-3Q6L8H2 238 aa3.48□□□□□ -1.85
NUP93-220ENST00000569842 KRTAP6-2Q3LI66 62 aa3.48□□□□□ -1.85
NUP93-220ENST00000569842 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
NUP93-220ENST00000569842 MT3P25713 68 aa3.41□□□□□ -1.86
NUP93-220ENST00000569842 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
NUP93-220ENST00000569842 INE1O15225 51 aa3.26□□□□□ -1.89
NUP93-220ENST00000569842 GPR98Q8WXG9 6306 aa3.26□□□□□ -1.89
NUP93-220ENST00000569842 KRTAP5-10Q6L8G5 202 aa3.26□□□□□ -1.89
NUP93-220ENST00000569842 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
NUP93-220ENST00000569842 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
NUP93-220ENST00000569842 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
NUP93-220ENST00000569842 KRTAP5-8O75690 187 aa3.08□□□□□ -1.92
NUP93-220ENST00000569842 KRTAP5-7Q6L8G8 165 aa3.06□□□□□ -1.92
NUP93-220ENST00000569842 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
NUP93-220ENST00000569842 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
NUP93-220ENST00000569842 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
NUP93-220ENST00000569842 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
NUP93-220ENST00000569842 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
NUP93-220ENST00000569842 KRTAP9-9Q9BYP9 154 aa2.84□□□□□ -1.95
NUP93-220ENST00000569842 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
NUP93-220ENST00000569842 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
NUP93-220ENST00000569842 MUC5BQ9HC84 5762 aaPredicted RBP2.74□□□□□ -1.97
NUP93-220ENST00000569842 KRTAP4-12Q9BQ66 201 aa2.73□□□□□ -1.97
NUP93-220ENST00000569842 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
NUP93-220ENST00000569842 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
NUP93-220ENST00000569842 PRM1P04553 51 aa2.53□□□□□ -2
NUP93-220ENST00000569842 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
NUP93-220ENST00000569842 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
NUP93-220ENST00000569842 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
NUP93-220ENST00000569842 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
NUP93-220ENST00000569842 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
NUP93-220ENST00000569842 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
NUP93-220ENST00000569842 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
NUP93-220ENST00000569842 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 86.8 ms