RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 HMCN1Q96RW7 5635 aa4.87□□□□□ -1.63
VPS9D1-207ENST00000568691 AHNAK2Q8IVF2 5795 aa4.86□□□□□ -1.63
VPS9D1-207ENST00000568691 SVIPQ8NHG7 77 aa4.83□□□□□ -1.64
VPS9D1-207ENST00000568691 C10orf95Q9H7T3 257 aa4.8□□□□□ -1.64
VPS9D1-207ENST00000568691 LCE1DQ5T752 114 aa4.79□□□□□ -1.64
VPS9D1-207ENST00000568691 KRTAP5-10Q6L8G5 202 aa4.79□□□□□ -1.64
VPS9D1-207ENST00000568691 PRO2289Q9P1D8 64 aa4.79□□□□□ -1.64
VPS9D1-207ENST00000568691 KRTAP25-1Q3LHN0 102 aa4.78□□□□□ -1.64
VPS9D1-207ENST00000568691 TNP1P09430 55 aa4.72□□□□□ -1.65
VPS9D1-207ENST00000568691 KRTAP10-7P60409 375 aaPredicted RBP4.72□□□□□ -1.65
VPS9D1-207ENST00000568691 PRAC1Q96KF2 57 aa4.69□□□□□ -1.66
VPS9D1-207ENST00000568691 KRTAP10-12P60413 245 aa4.67□□□□□ -1.66
VPS9D1-207ENST00000568691 KRTAP23-1A1A580 65 aa4.66□□□□□ -1.66
VPS9D1-207ENST00000568691 KRTAP5-7Q6L8G8 165 aa4.66□□□□□ -1.66
VPS9D1-207ENST00000568691 PP632Q6XCG6 107 aa4.65□□□□□ -1.67
VPS9D1-207ENST00000568691 MT4P47944 62 aa4.62□□□□□ -1.67
VPS9D1-207ENST00000568691 LCE5AQ5TCM9 118 aa4.61□□□□□ -1.67
VPS9D1-207ENST00000568691 LCE4AQ5TA78 99 aa4.54□□□□□ -1.68
VPS9D1-207ENST00000568691 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
VPS9D1-207ENST00000568691 KRTAP4-6Q9BYQ5 205 aa4.5□□□□□ -1.69
VPS9D1-207ENST00000568691 KRTAP19-3Q7Z4W3 81 aa4.47□□□□□ -1.69
VPS9D1-207ENST00000568691 SPRR5A0A1B0GTR4 108 aa4.46□□□□□ -1.7
VPS9D1-207ENST00000568691 KRTAP19-7Q3SYF9 63 aa4.46□□□□□ -1.7
VPS9D1-207ENST00000568691 LCE3AQ5TA76 89 aa4.46□□□□□ -1.7
VPS9D1-207ENST00000568691 KRTAP5-4Q6L8H1 288 aa4.44□□□□□ -1.7
VPS9D1-207ENST00000568691 MT1EP04732 61 aa4.42□□□□□ -1.7
VPS9D1-207ENST00000568691 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
VPS9D1-207ENST00000568691 MT1GP13640 62 aa4.26□□□□□ -1.73
VPS9D1-207ENST00000568691 KRTAP19-5Q3LI72 72 aa4.26□□□□□ -1.73
VPS9D1-207ENST00000568691 MT1MQ8N339 61 aa4.25□□□□□ -1.73
VPS9D1-207ENST00000568691 KRTAP15-1Q3LI76 137 aa4.24□□□□□ -1.73
VPS9D1-207ENST00000568691 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
VPS9D1-207ENST00000568691 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.74
VPS9D1-207ENST00000568691 KRTAP19-4Q3LI73 84 aa4.2□□□□□ -1.74
VPS9D1-207ENST00000568691 AHNAKQ09666 5890 aaKnown RBP4.18□□□□□ -1.74
VPS9D1-207ENST00000568691 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
VPS9D1-207ENST00000568691 MT1LQ93083 61 aa4.11□□□□□ -1.75
VPS9D1-207ENST00000568691 MUC5BQ9HC84 5762 aaPredicted RBP4.1□□□□□ -1.75
VPS9D1-207ENST00000568691 LCE3CQ5T5A8 94 aa4.03□□□□□ -1.76
VPS9D1-207ENST00000568691 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
VPS9D1-207ENST00000568691 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
VPS9D1-207ENST00000568691 KRTAP4-7Q9BYR0 210 aa3.95□□□□□ -1.78
VPS9D1-207ENST00000568691 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
VPS9D1-207ENST00000568691 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
VPS9D1-207ENST00000568691 LUZP6Q538Z0 58 aa3.93□□□□□ -1.78
VPS9D1-207ENST00000568691 KRTAP12-4P60329 112 aa3.9□□□□□ -1.79
VPS9D1-207ENST00000568691 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
VPS9D1-207ENST00000568691 KRTAP9-6A8MVA2 160 aa3.77□□□□□ -1.81
VPS9D1-207ENST00000568691 LOC100996750A0A140TA64 210 aa3.76□□□□□ -1.81
VPS9D1-207ENST00000568691 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
VPS9D1-207ENST00000568691 KRTAP9-9Q9BYP9 154 aa3.7□□□□□ -1.82
VPS9D1-207ENST00000568691 OBSCNQ5VST9 7968 aa3.68□□□□□ -1.82
VPS9D1-207ENST00000568691 H3BS24 57 aa3.53□□□□□ -1.84
VPS9D1-207ENST00000568691 KRTAP6-1Q3LI64 71 aa3.53□□□□□ -1.84
VPS9D1-207ENST00000568691 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
VPS9D1-207ENST00000568691 MT1AP04731 61 aa3.5□□□□□ -1.85
VPS9D1-207ENST00000568691 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
VPS9D1-207ENST00000568691 KRTAP9-4Q9BYQ2 154 aa3.45□□□□□ -1.86
VPS9D1-207ENST00000568691 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
VPS9D1-207ENST00000568691 INE1O15225 51 aa3.2□□□□□ -1.9
VPS9D1-207ENST00000568691 MT3P25713 68 aa3.17□□□□□ -1.9
VPS9D1-207ENST00000568691 LCE1EQ5T753 118 aa3.06□□□□□ -1.92
VPS9D1-207ENST00000568691 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
VPS9D1-207ENST00000568691 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
VPS9D1-207ENST00000568691 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
VPS9D1-207ENST00000568691 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
VPS9D1-207ENST00000568691 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
VPS9D1-207ENST00000568691 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
VPS9D1-207ENST00000568691 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
VPS9D1-207ENST00000568691 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
VPS9D1-207ENST00000568691 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
VPS9D1-207ENST00000568691 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
VPS9D1-207ENST00000568691 PRM1P04553 51 aa2.53□□□□□ -2
VPS9D1-207ENST00000568691 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
VPS9D1-207ENST00000568691 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
VPS9D1-207ENST00000568691 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
VPS9D1-207ENST00000568691 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
VPS9D1-207ENST00000568691 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 49.9 ms