RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 KRTAP2-1Q9BYU5 128 aa6.27□□□□□ -1.41
PKD1-235ENST00000568591 KRTAP4-3Q9BYR4 195 aa6.13□□□□□ -1.43
PKD1-235ENST00000568591 FCGBPQ9Y6R7 5405 aaPredicted RBP6.12□□□□□ -1.43
PKD1-235ENST00000568591 LOC100996750A0A140TA64 210 aa6.11□□□□□ -1.43
PKD1-235ENST00000568591 MUC12Q9UKN1 5478 aa6.11□□□□□ -1.43
PKD1-235ENST00000568591 KRTAP19-6Q3LI70 58 aa6.1□□□□□ -1.43
PKD1-235ENST00000568591 KRTAP9-6A0A140TA67 174 aa6□□□□□ -1.45
PKD1-235ENST00000568591 CRCT1Q9UGL9 99 aa6□□□□□ -1.45
PKD1-235ENST00000568591 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
PKD1-235ENST00000568591 MT1GP13640 62 aa5.98□□□□□ -1.45
PKD1-235ENST00000568591 DSTQ03001 7570 aaKnown RBP5.94□□□□□ -1.46
PKD1-235ENST00000568591 MT1MQ8N339 61 aa5.87□□□□□ -1.47
PKD1-235ENST00000568591 KRTAP19-3Q7Z4W3 81 aa5.83□□□□□ -1.48
PKD1-235ENST00000568591 MACF1Q9UPN3 7388 aaKnown RBP5.67□□□□□ -1.5
PKD1-235ENST00000568591 KRTAP12-4P60329 112 aa5.63□□□□□ -1.51
PKD1-235ENST00000568591 SPRR2FQ96RM1 72 aa5.63□□□□□ -1.51
PKD1-235ENST00000568591 LCE5AQ5TCM9 118 aa5.62□□□□□ -1.51
PKD1-235ENST00000568591 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.58□□□□□ -1.52
PKD1-235ENST00000568591 SYNE1Q8NF91 8797 aaKnown RBP5.58□□□□□ -1.52
PKD1-235ENST00000568591 LCE3BQ5TA77 95 aa5.57□□□□□ -1.52
PKD1-235ENST00000568591 KRTAP4-9Q9BYQ8 210 aa5.56□□□□□ -1.52
PKD1-235ENST00000568591 SYNE2Q8WXH0 6885 aaKnown RBP5.55□□□□□ -1.52
PKD1-235ENST00000568591 MDN1Q9NU22 5596 aa5.47□□□□□ -1.53
PKD1-235ENST00000568591 KRTAP9-7A8MTY7 169 aa5.43□□□□□ -1.54
PKD1-235ENST00000568591 KRTAP6-1Q3LI64 71 aa5.41□□□□□ -1.54
PKD1-235ENST00000568591 KRTAP6-3Q3LI67 103 aa5.32□□□□□ -1.56
PKD1-235ENST00000568591 KRTAP5-9P26371 169 aa5.31□□□□□ -1.56
PKD1-235ENST00000568591 MT1AP04731 61 aa5.23□□□□□ -1.57
PKD1-235ENST00000568591 KRTAP2-2Q9BYT5 123 aa5.23□□□□□ -1.57
PKD1-235ENST00000568591 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.58
PKD1-235ENST00000568591 LCE3DQ9BYE3 92 aa5.18□□□□□ -1.58
PKD1-235ENST00000568591 SPRR2EP22531 72 aa5.17□□□□□ -1.58
PKD1-235ENST00000568591 SPRR2BP35325 72 aa5.17□□□□□ -1.58
PKD1-235ENST00000568591 SPRR2AP35326 72 aa5.17□□□□□ -1.58
PKD1-235ENST00000568591 KRTAP5-5Q701N2 237 aaPredicted RBP5.15□□□□□ -1.58
PKD1-235ENST00000568591 OBSCNQ5VST9 7968 aa5.14□□□□□ -1.59
PKD1-235ENST00000568591 LCE3EQ5T5B0 92 aa5.1□□□□□ -1.59
PKD1-235ENST00000568591 NEBP20929 6669 aa5.07□□□□□ -1.6
PKD1-235ENST00000568591 PRM1P04553 51 aa5.01□□□□□ -1.61
PKD1-235ENST00000568591 SPRR2DP22532 72 aa4.97□□□□□ -1.61
PKD1-235ENST00000568591 KRTAP9-4Q9BYQ2 154 aa4.93□□□□□ -1.62
PKD1-235ENST00000568591 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
PKD1-235ENST00000568591 KRTAP20-1Q3LI63 56 aa4.77□□□□□ -1.65
PKD1-235ENST00000568591 LCE1EQ5T753 118 aa4.76□□□□□ -1.65
PKD1-235ENST00000568591 MT3P25713 68 aa4.68□□□□□ -1.66
PKD1-235ENST00000568591 LCE1DQ5T752 114 aa4.59□□□□□ -1.67
PKD1-235ENST00000568591 KRTAP5-4Q6L8H1 288 aa4.47□□□□□ -1.69
PKD1-235ENST00000568591 KRTAP4-6Q9BYQ5 205 aa4.42□□□□□ -1.7
PKD1-235ENST00000568591 MT4P47944 62 aa4.36□□□□□ -1.71
PKD1-235ENST00000568591 LCE4AQ5TA78 99 aa4.34□□□□□ -1.72
PKD1-235ENST00000568591 LCE1FQ5T754 118 aa4.25□□□□□ -1.73
PKD1-235ENST00000568591 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
PKD1-235ENST00000568591 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
PKD1-235ENST00000568591 KRTAP5-2Q701N4 177 aa4.16□□□□□ -1.74
PKD1-235ENST00000568591 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
PKD1-235ENST00000568591 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
PKD1-235ENST00000568591 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
PKD1-235ENST00000568591 AHNAK2Q8IVF2 5795 aa3.85□□□□□ -1.79
PKD1-235ENST00000568591 GPR98Q8WXG9 6306 aa3.83□□□□□ -1.8
PKD1-235ENST00000568591 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
PKD1-235ENST00000568591 KRTAP5-10Q6L8G5 202 aa3.8□□□□□ -1.8
PKD1-235ENST00000568591 KRTAP5-1Q6L8H4 278 aa3.7□□□□□ -1.82
PKD1-235ENST00000568591 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
PKD1-235ENST00000568591 KRTAP5-7Q6L8G8 165 aa3.57□□□□□ -1.84
PKD1-235ENST00000568591 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
PKD1-235ENST00000568591 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.85
PKD1-235ENST00000568591 KRTAP5-8O75690 187 aa3.46□□□□□ -1.86
PKD1-235ENST00000568591 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
PKD1-235ENST00000568591 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
PKD1-235ENST00000568591 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
PKD1-235ENST00000568591 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
PKD1-235ENST00000568591 MUC5BQ9HC84 5762 aaPredicted RBP3.15□□□□□ -1.91
PKD1-235ENST00000568591 KRTAP21-1Q3LI58 79 aa3.14□□□□□ -1.91
PKD1-235ENST00000568591 KRTAP4-12Q9BQ66 201 aa3.05□□□□□ -1.92
PKD1-235ENST00000568591 AHNAKQ09666 5890 aaKnown RBP3.05□□□□□ -1.92
PKD1-235ENST00000568591 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
PKD1-235ENST00000568591 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
PKD1-235ENST00000568591 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 78.7 ms