RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 PLAC4Q8WY50 150 aa3.71□□□□□ -1.82
KLHDC4-220ENST00000568338 K7ERS5 55 aa3.7□□□□□ -1.82
KLHDC4-220ENST00000568338 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
KLHDC4-220ENST00000568338 KRTAP2-1Q9BYU5 128 aa3.7□□□□□ -1.82
KLHDC4-220ENST00000568338 MT1BP07438 61 aa3.69□□□□□ -1.82
KLHDC4-220ENST00000568338 KRTAP12-2P59991 146 aa3.68□□□□□ -1.82
KLHDC4-220ENST00000568338 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
KLHDC4-220ENST00000568338 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
KLHDC4-220ENST00000568338 SPRR2EP22531 72 aa3.67□□□□□ -1.82
KLHDC4-220ENST00000568338 SPRR2BP35325 72 aa3.67□□□□□ -1.82
KLHDC4-220ENST00000568338 SPRR2AP35326 72 aa3.67□□□□□ -1.82
KLHDC4-220ENST00000568338 KRTAP10-5P60370 271 aa3.64□□□□□ -1.83
KLHDC4-220ENST00000568338 CAMK2N1Q7Z7J9 78 aa3.64□□□□□ -1.83
KLHDC4-220ENST00000568338 SVIPQ8NHG7 77 aa3.63□□□□□ -1.83
KLHDC4-220ENST00000568338 SPRR2FQ96RM1 72 aa3.62□□□□□ -1.83
KLHDC4-220ENST00000568338 PRO0628Q9UI54 55 aa3.6□□□□□ -1.83
KLHDC4-220ENST00000568338 PRO2289Q9P1D8 64 aa3.58□□□□□ -1.84
KLHDC4-220ENST00000568338 SPRR2DP22532 72 aa3.56□□□□□ -1.84
KLHDC4-220ENST00000568338 MT1XP80297 61 aa3.55□□□□□ -1.84
KLHDC4-220ENST00000568338 PMAIP1Q13794 54 aa3.52□□□□□ -1.85
KLHDC4-220ENST00000568338 ROMO1P60602 79 aa3.5□□□□□ -1.85
KLHDC4-220ENST00000568338 C10orf95Q9H7T3 257 aa3.5□□□□□ -1.85
KLHDC4-220ENST00000568338 KRTAP8-1Q8IUC2 63 aa3.48□□□□□ -1.85
KLHDC4-220ENST00000568338 TNP1P09430 55 aa3.45□□□□□ -1.86
KLHDC4-220ENST00000568338 KRTAP25-1Q3LHN0 102 aa3.43□□□□□ -1.86
KLHDC4-220ENST00000568338 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
KLHDC4-220ENST00000568338 KRTAP10-12P60413 245 aa3.38□□□□□ -1.87
KLHDC4-220ENST00000568338 KTN1-AS1Q86SY8 53 aa3.36□□□□□ -1.87
KLHDC4-220ENST00000568338 DSTQ03001 7570 aaKnown RBP3.31□□□□□ -1.88
KLHDC4-220ENST00000568338 PP632Q6XCG6 107 aa3.31□□□□□ -1.88
KLHDC4-220ENST00000568338 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
KLHDC4-220ENST00000568338 PRAC1Q96KF2 57 aa3.29□□□□□ -1.88
KLHDC4-220ENST00000568338 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
KLHDC4-220ENST00000568338 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
KLHDC4-220ENST00000568338 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
KLHDC4-220ENST00000568338 KRTAP5-10Q6L8G5 202 aa3.23□□□□□ -1.89
KLHDC4-220ENST00000568338 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
KLHDC4-220ENST00000568338 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
KLHDC4-220ENST00000568338 KRTAP12-3P60328 96 aa3.18□□□□□ -1.9
KLHDC4-220ENST00000568338 KRTAP19-5Q3LI72 72 aa3.18□□□□□ -1.9
KLHDC4-220ENST00000568338 KRTAP19-7Q3SYF9 63 aa3.17□□□□□ -1.9
KLHDC4-220ENST00000568338 KRTAP5-7Q6L8G8 165 aa3.16□□□□□ -1.9
KLHDC4-220ENST00000568338 MT4P47944 62 aa3.14□□□□□ -1.91
KLHDC4-220ENST00000568338 MT1EP04732 61 aa3.13□□□□□ -1.91
KLHDC4-220ENST00000568338 SPRR5A0A1B0GTR4 108 aa3.09□□□□□ -1.91
KLHDC4-220ENST00000568338 KRTAP4-4Q9BYR3 166 aa3.08□□□□□ -1.92
KLHDC4-220ENST00000568338 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
KLHDC4-220ENST00000568338 MT1LQ93083 61 aa3.05□□□□□ -1.92
KLHDC4-220ENST00000568338 NDUFAF8A1L188 74 aa3.04□□□□□ -1.92
KLHDC4-220ENST00000568338 KRTAP19-3Q7Z4W3 81 aa3.04□□□□□ -1.92
KLHDC4-220ENST00000568338 MT1GP13640 62 aa3□□□□□ -1.93
KLHDC4-220ENST00000568338 MT1MQ8N339 61 aa2.95□□□□□ -1.94
KLHDC4-220ENST00000568338 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
KLHDC4-220ENST00000568338 KRTAP4-3Q9BYR4 195 aa2.86□□□□□ -1.95
KLHDC4-220ENST00000568338 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
KLHDC4-220ENST00000568338 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
KLHDC4-220ENST00000568338 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
KLHDC4-220ENST00000568338 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
KLHDC4-220ENST00000568338 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
KLHDC4-220ENST00000568338 LUZP6Q538Z0 58 aa2.74□□□□□ -1.97
KLHDC4-220ENST00000568338 KRTAP12-4P60329 112 aa2.71□□□□□ -1.98
KLHDC4-220ENST00000568338 KRTAP5-5Q701N2 237 aaPredicted RBP2.67□□□□□ -1.98
KLHDC4-220ENST00000568338 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
KLHDC4-220ENST00000568338 MT1AP04731 61 aa2.61□□□□□ -1.99
KLHDC4-220ENST00000568338 KRTAP6-1Q3LI64 71 aa2.56□□□□□ -2
KLHDC4-220ENST00000568338 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
KLHDC4-220ENST00000568338 SYNE1Q8NF91 8797 aaKnown RBP2.49□□□□□ -2.01
KLHDC4-220ENST00000568338 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
KLHDC4-220ENST00000568338 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
KLHDC4-220ENST00000568338 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
KLHDC4-220ENST00000568338 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
KLHDC4-220ENST00000568338 INE1O15225 51 aa2.15□□□□□ -2.07
KLHDC4-220ENST00000568338 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
KLHDC4-220ENST00000568338 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
KLHDC4-220ENST00000568338 PRM1P04553 51 aa1.81□□□□□ -2.12
KLHDC4-220ENST00000568338 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
KLHDC4-220ENST00000568338 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
KLHDC4-220ENST00000568338 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms