RNA–Protein interactions for RNA: ENST00000567883.5

FANCA-227, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-227ENST00000567883 KRTAP4-7Q9BYR0 210 aa4.02□□□□□ -1.77
FANCA-227ENST00000567883 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
FANCA-227ENST00000567883 PP632Q6XCG6 107 aa4.01□□□□□ -1.77
FANCA-227ENST00000567883 A0A1B0GU33 70 aa3.98□□□□□ -1.77
FANCA-227ENST00000567883 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
FANCA-227ENST00000567883 ATP5EP56381 51 aaPredicted RBP3.97□□□□□ -1.77
FANCA-227ENST00000567883 KRTAP19-5Q3LI72 72 aa3.97□□□□□ -1.77
FANCA-227ENST00000567883 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
FANCA-227ENST00000567883 A0A0D9SG42 100 aa3.96□□□□□ -1.78
FANCA-227ENST00000567883 A0A1B0GU69 56 aa3.96□□□□□ -1.78
FANCA-227ENST00000567883 SPATA8Q6RVD6 105 aa3.96□□□□□ -1.78
FANCA-227ENST00000567883 MT1MQ8N339 61 aa3.96□□□□□ -1.78
FANCA-227ENST00000567883 AHNAKQ09666 5890 aaKnown RBP3.95□□□□□ -1.78
FANCA-227ENST00000567883 KRTAP5-7Q6L8G8 165 aa3.95□□□□□ -1.78
FANCA-227ENST00000567883 MT1LQ93083 61 aa3.91□□□□□ -1.78
FANCA-227ENST00000567883 TMEM258P61165 79 aa3.9□□□□□ -1.79
FANCA-227ENST00000567883 SPINT4Q6UDR6 99 aa3.89□□□□□ -1.79
FANCA-227ENST00000567883 KRTAP12-1P59990 96 aa3.88□□□□□ -1.79
FANCA-227ENST00000567883 SMIM26A0A096LP01 95 aa3.87□□□□□ -1.79
FANCA-227ENST00000567883 PRR15LQ9BU68 103 aa3.86□□□□□ -1.79
FANCA-227ENST00000567883 KRTAP4-3Q9BYR4 195 aa3.85□□□□□ -1.79
FANCA-227ENST00000567883 LINC01558Q9Y6Z2 57 aa3.85□□□□□ -1.79
FANCA-227ENST00000567883 A8MU10 97 aa3.84□□□□□ -1.79
FANCA-227ENST00000567883 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.79
FANCA-227ENST00000567883 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
FANCA-227ENST00000567883 NDUFAF8A1L188 74 aa3.77□□□□□ -1.81
FANCA-227ENST00000567883 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
FANCA-227ENST00000567883 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
FANCA-227ENST00000567883 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
FANCA-227ENST00000567883 LCE3AQ5TA76 89 aa3.74□□□□□ -1.81
FANCA-227ENST00000567883 UQCR11O14957 56 aa3.73□□□□□ -1.81
FANCA-227ENST00000567883 MT3P25713 68 aa3.73□□□□□ -1.81
FANCA-227ENST00000567883 TNP1P09430 55 aa3.68□□□□□ -1.82
FANCA-227ENST00000567883 KRTAP5-5Q701N2 237 aaPredicted RBP3.68□□□□□ -1.82
FANCA-227ENST00000567883 V9GYY9 64 aa3.68□□□□□ -1.82
FANCA-227ENST00000567883 MIR22HGQ0VDD5 57 aa3.66□□□□□ -1.82
FANCA-227ENST00000567883 Q1T7F1 81 aa3.65□□□□□ -1.83
FANCA-227ENST00000567883 PSPHP1O15172 72 aa3.64□□□□□ -1.83
FANCA-227ENST00000567883 KRTAP12-4P60329 112 aa3.64□□□□□ -1.83
FANCA-227ENST00000567883 KRTAP12-3P60328 96 aa3.6□□□□□ -1.83
FANCA-227ENST00000567883 K7ERS5 55 aa3.58□□□□□ -1.84
FANCA-227ENST00000567883 RPS28P62857 69 aaKnown RBP3.54□□□□□ -1.84
FANCA-227ENST00000567883 SYNE1Q8NF91 8797 aaKnown RBP3.52□□□□□ -1.85
FANCA-227ENST00000567883 A6NED7 52 aa3.52□□□□□ -1.85
FANCA-227ENST00000567883 KRTAP25-1Q3LHN0 102 aa3.51□□□□□ -1.85
FANCA-227ENST00000567883 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
FANCA-227ENST00000567883 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
FANCA-227ENST00000567883 CDC42SE1Q9NRR8 79 aa3.4□□□□□ -1.87
FANCA-227ENST00000567883 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
FANCA-227ENST00000567883 ROMO1P60602 79 aa3.35□□□□□ -1.87
FANCA-227ENST00000567883 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
FANCA-227ENST00000567883 MT1AP04731 61 aa3.32□□□□□ -1.88
FANCA-227ENST00000567883 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
FANCA-227ENST00000567883 LCE3CQ5T5A8 94 aa3.3□□□□□ -1.88
FANCA-227ENST00000567883 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
FANCA-227ENST00000567883 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
FANCA-227ENST00000567883 BRK1Q8WUW1 75 aa3.13□□□□□ -1.91
FANCA-227ENST00000567883 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
FANCA-227ENST00000567883 KRTAP9-6A8MVA2 160 aa3.11□□□□□ -1.91
FANCA-227ENST00000567883 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
FANCA-227ENST00000567883 PMAIP1Q13794 54 aa2.94□□□□□ -1.94
FANCA-227ENST00000567883 PRO0628Q9UI54 55 aa2.89□□□□□ -1.95
FANCA-227ENST00000567883 LUZP6Q538Z0 58 aa2.82□□□□□ -1.96
FANCA-227ENST00000567883 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
FANCA-227ENST00000567883 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
FANCA-227ENST00000567883 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
FANCA-227ENST00000567883 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
FANCA-227ENST00000567883 KTN1-AS1Q86SY8 53 aa2.65□□□□□ -1.99
FANCA-227ENST00000567883 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
FANCA-227ENST00000567883 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
FANCA-227ENST00000567883 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
FANCA-227ENST00000567883 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
FANCA-227ENST00000567883 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
FANCA-227ENST00000567883 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
FANCA-227ENST00000567883 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
FANCA-227ENST00000567883 PRM1P04553 51 aa1.72□□□□□ -2.13
FANCA-227ENST00000567883 INE1O15225 51 aa1.64□□□□□ -2.15
FANCA-227ENST00000567883 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 9.8 ms