RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 P0C880 135 aa2.75□□□□□ -1.97
UBFD1-204ENST00000565634 COA5Q86WW8 74 aa2.74□□□□□ -1.97
UBFD1-204ENST00000565634 SPRR2DP22532 72 aa2.73□□□□□ -1.97
UBFD1-204ENST00000565634 MT1BP07438 61 aa2.71□□□□□ -1.98
UBFD1-204ENST00000565634 H0YAA0 97 aa2.69□□□□□ -1.98
UBFD1-204ENST00000565634 CHKB-CPT1BH3BT56 60 aa2.69□□□□□ -1.98
UBFD1-204ENST00000565634 A6NED7 52 aa2.68□□□□□ -1.98
UBFD1-204ENST00000565634 KRTAP12-2P59991 146 aa2.68□□□□□ -1.98
UBFD1-204ENST00000565634 SPRR2GQ9BYE4 73 aa2.68□□□□□ -1.98
UBFD1-204ENST00000565634 K7ERS5 55 aa2.67□□□□□ -1.98
UBFD1-204ENST00000565634 KRTAP13-4Q3LI77 160 aa2.67□□□□□ -1.98
UBFD1-204ENST00000565634 KRTAP19-8Q3LI54 63 aa2.66□□□□□ -1.98
UBFD1-204ENST00000565634 Q1T7F1 81 aa2.64□□□□□ -1.99
UBFD1-204ENST00000565634 M0QZ58 72 aa2.62□□□□□ -1.99
UBFD1-204ENST00000565634 PMAIP1Q13794 54 aa2.62□□□□□ -1.99
UBFD1-204ENST00000565634 Q5VV11 94 aa2.62□□□□□ -1.99
UBFD1-204ENST00000565634 SPINT4Q6UDR6 99 aa2.62□□□□□ -1.99
UBFD1-204ENST00000565634 SPTSSBQ8NFR3 76 aa2.62□□□□□ -1.99
UBFD1-204ENST00000565634 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
UBFD1-204ENST00000565634 DSTQ03001 7570 aaKnown RBP2.61□□□□□ -1.99
UBFD1-204ENST00000565634 LINC01554Q52M75 96 aa2.6□□□□□ -1.99
UBFD1-204ENST00000565634 SPATA8Q6RVD6 105 aa2.6□□□□□ -1.99
UBFD1-204ENST00000565634 CRIPTQ9P021 101 aa2.6□□□□□ -1.99
UBFD1-204ENST00000565634 KRTAP8-1Q8IUC2 63 aa2.59□□□□□ -1.99
UBFD1-204ENST00000565634 R4GN34 69 aa2.59□□□□□ -1.99
UBFD1-204ENST00000565634 LINC01558Q9Y6Z2 57 aa2.58□□□□□ -2
UBFD1-204ENST00000565634 A0A1B0GU33 70 aa2.56□□□□□ -2
UBFD1-204ENST00000565634 KRTAP25-1Q3LHN0 102 aa2.56□□□□□ -2
UBFD1-204ENST00000565634 A0A0D9SG42 100 aa2.55□□□□□ -2
UBFD1-204ENST00000565634 SPRR5A0A1B0GTR4 108 aa2.55□□□□□ -2
UBFD1-204ENST00000565634 MT1XP80297 61 aa2.55□□□□□ -2
UBFD1-204ENST00000565634 A0A1B0GU69 56 aa2.54□□□□□ -2
UBFD1-204ENST00000565634 BRK1Q8WUW1 75 aa2.53□□□□□ -2
UBFD1-204ENST00000565634 KRTAP5-10Q6L8G5 202 aa2.52□□□□□ -2.01
UBFD1-204ENST00000565634 PRR15LQ9BU68 103 aa2.52□□□□□ -2.01
UBFD1-204ENST00000565634 KRTAP12-1P59990 96 aa2.51□□□□□ -2.01
UBFD1-204ENST00000565634 PLAC4Q8WY50 150 aa2.51□□□□□ -2.01
UBFD1-204ENST00000565634 MT4P47944 62 aa2.49□□□□□ -2.01
UBFD1-204ENST00000565634 CDC42SE1Q9NRR8 79 aa2.47□□□□□ -2.01
UBFD1-204ENST00000565634 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
UBFD1-204ENST00000565634 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
UBFD1-204ENST00000565634 AHNAK2Q8IVF2 5795 aa2.45□□□□□ -2.02
UBFD1-204ENST00000565634 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
UBFD1-204ENST00000565634 UQCR11O14957 56 aa2.42□□□□□ -2.02
UBFD1-204ENST00000565634 MIR22HGQ0VDD5 57 aa2.42□□□□□ -2.02
UBFD1-204ENST00000565634 C10orf95Q9H7T3 257 aa2.42□□□□□ -2.02
UBFD1-204ENST00000565634 KTN1-AS1Q86SY8 53 aa2.4□□□□□ -2.03
UBFD1-204ENST00000565634 PRO2289Q9P1D8 64 aa2.39□□□□□ -2.03
UBFD1-204ENST00000565634 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
UBFD1-204ENST00000565634 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
UBFD1-204ENST00000565634 KRTAP19-7Q3SYF9 63 aa2.28□□□□□ -2.04
UBFD1-204ENST00000565634 KRTAP19-5Q3LI72 72 aa2.27□□□□□ -2.05
UBFD1-204ENST00000565634 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
UBFD1-204ENST00000565634 TNP1P09430 55 aa2.25□□□□□ -2.05
UBFD1-204ENST00000565634 MT1EP04732 61 aa2.23□□□□□ -2.05
UBFD1-204ENST00000565634 ROMO1P60602 79 aa2.21□□□□□ -2.06
UBFD1-204ENST00000565634 KRTAP19-3Q7Z4W3 81 aa2.21□□□□□ -2.06
UBFD1-204ENST00000565634 KRTAP12-3P60328 96 aa2.16□□□□□ -2.06
UBFD1-204ENST00000565634 MT1LQ93083 61 aa2.16□□□□□ -2.06
UBFD1-204ENST00000565634 KRTAP20-2Q3LI61 65 aa2.14□□□□□ -2.07
UBFD1-204ENST00000565634 PP632Q6XCG6 107 aa2.14□□□□□ -2.07
UBFD1-204ENST00000565634 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
UBFD1-204ENST00000565634 MT1MQ8N339 61 aa2.11□□□□□ -2.07
UBFD1-204ENST00000565634 MT1GP13640 62 aa2.1□□□□□ -2.07
UBFD1-204ENST00000565634 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
UBFD1-204ENST00000565634 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
UBFD1-204ENST00000565634 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
UBFD1-204ENST00000565634 SYNE1Q8NF91 8797 aaKnown RBP1.98□□□□□ -2.09
UBFD1-204ENST00000565634 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
UBFD1-204ENST00000565634 KRTAP6-1Q3LI64 71 aa1.86□□□□□ -2.11
UBFD1-204ENST00000565634 MT1AP04731 61 aa1.81□□□□□ -2.12
UBFD1-204ENST00000565634 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
UBFD1-204ENST00000565634 KRTAP6-2Q3LI66 62 aa1.75□□□□□ -2.13
UBFD1-204ENST00000565634 INE1O15225 51 aa1.74□□□□□ -2.13
UBFD1-204ENST00000565634 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
UBFD1-204ENST00000565634 PRM1P04553 51 aa1.18□□□□□ -2.22
UBFD1-204ENST00000565634 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
UBFD1-204ENST00000565634 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 38.2 ms