RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 PLAC4Q8WY50 150 aa3.22□□□□□ -1.89
MAP1LC3B-205ENST00000564638 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
MAP1LC3B-205ENST00000564638 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
MAP1LC3B-205ENST00000564638 KRTAP19-8Q3LI54 63 aa3.16□□□□□ -1.9
MAP1LC3B-205ENST00000564638 MT1BP07438 61 aa3.15□□□□□ -1.91
MAP1LC3B-205ENST00000564638 TNP1P09430 55 aa3.14□□□□□ -1.91
MAP1LC3B-205ENST00000564638 PP632Q6XCG6 107 aa3.14□□□□□ -1.91
MAP1LC3B-205ENST00000564638 KRTAP2-3P0C7H8 128 aa3.12□□□□□ -1.91
MAP1LC3B-205ENST00000564638 KRTAP2-4Q9BYR9 128 aa3.12□□□□□ -1.91
MAP1LC3B-205ENST00000564638 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
MAP1LC3B-205ENST00000564638 KRTAP10-5P60370 271 aa3.06□□□□□ -1.92
MAP1LC3B-205ENST00000564638 MT1XP80297 61 aa3.02□□□□□ -1.93
MAP1LC3B-205ENST00000564638 PRO2289Q9P1D8 64 aa3.02□□□□□ -1.93
MAP1LC3B-205ENST00000564638 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
MAP1LC3B-205ENST00000564638 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
MAP1LC3B-205ENST00000564638 LCE3AQ5TA76 89 aa2.96□□□□□ -1.94
MAP1LC3B-205ENST00000564638 KRTAP10-12P60413 245 aa2.95□□□□□ -1.94
MAP1LC3B-205ENST00000564638 KRTAP10-7P60409 375 aaPredicted RBP2.9□□□□□ -1.95
MAP1LC3B-205ENST00000564638 KRTAP8-1Q8IUC2 63 aa2.9□□□□□ -1.95
MAP1LC3B-205ENST00000564638 LCE1AQ5T7P2 110 aa2.89□□□□□ -1.95
MAP1LC3B-205ENST00000564638 SPRR2EP22531 72 aa2.86□□□□□ -1.95
MAP1LC3B-205ENST00000564638 SPRR2BP35325 72 aa2.86□□□□□ -1.95
MAP1LC3B-205ENST00000564638 SPRR2AP35326 72 aa2.86□□□□□ -1.95
MAP1LC3B-205ENST00000564638 DSTQ03001 7570 aaKnown RBP2.86□□□□□ -1.95
MAP1LC3B-205ENST00000564638 KRTAP12-3P60328 96 aa2.85□□□□□ -1.95
MAP1LC3B-205ENST00000564638 NDUFAF8A1L188 74 aa2.83□□□□□ -1.96
MAP1LC3B-205ENST00000564638 LUZP6Q538Z0 58 aa2.82□□□□□ -1.96
MAP1LC3B-205ENST00000564638 SPRR2FQ96RM1 72 aa2.82□□□□□ -1.96
MAP1LC3B-205ENST00000564638 SPRR5A0A1B0GTR4 108 aa2.8□□□□□ -1.96
MAP1LC3B-205ENST00000564638 AHNAK2Q8IVF2 5795 aa2.79□□□□□ -1.96
MAP1LC3B-205ENST00000564638 SPRR2DP22532 72 aa2.77□□□□□ -1.97
MAP1LC3B-205ENST00000564638 KRTAP19-5Q3LI72 72 aa2.77□□□□□ -1.97
MAP1LC3B-205ENST00000564638 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
MAP1LC3B-205ENST00000564638 KRTAP5-10Q6L8G5 202 aa2.71□□□□□ -1.98
MAP1LC3B-205ENST00000564638 KRTAP19-7Q3SYF9 63 aa2.68□□□□□ -1.98
MAP1LC3B-205ENST00000564638 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
MAP1LC3B-205ENST00000564638 LCE3CQ5T5A8 94 aa2.66□□□□□ -1.98
MAP1LC3B-205ENST00000564638 MT1EP04732 61 aa2.65□□□□□ -1.99
MAP1LC3B-205ENST00000564638 KRTAP5-7Q6L8G8 165 aa2.64□□□□□ -1.99
MAP1LC3B-205ENST00000564638 MT1LQ93083 61 aa2.61□□□□□ -1.99
MAP1LC3B-205ENST00000564638 MT3P25713 68 aa2.6□□□□□ -1.99
MAP1LC3B-205ENST00000564638 KRTAP19-3Q7Z4W3 81 aa2.6□□□□□ -1.99
MAP1LC3B-205ENST00000564638 MT1GP13640 62 aa2.54□□□□□ -2
MAP1LC3B-205ENST00000564638 MT1MQ8N339 61 aa2.51□□□□□ -2.01
MAP1LC3B-205ENST00000564638 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
MAP1LC3B-205ENST00000564638 MT4P47944 62 aa2.48□□□□□ -2.01
MAP1LC3B-205ENST00000564638 KRTAP4-3Q9BYR4 195 aa2.47□□□□□ -2.01
MAP1LC3B-205ENST00000564638 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
MAP1LC3B-205ENST00000564638 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
MAP1LC3B-205ENST00000564638 MUC5ACP98088 5654 aa2.4□□□□□ -2.03
MAP1LC3B-205ENST00000564638 KRTAP5-4Q6L8H1 288 aa2.38□□□□□ -2.03
MAP1LC3B-205ENST00000564638 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
MAP1LC3B-205ENST00000564638 INE1O15225 51 aa2.35□□□□□ -2.03
MAP1LC3B-205ENST00000564638 LCE1EQ5T753 118 aa2.26□□□□□ -2.05
MAP1LC3B-205ENST00000564638 KRTAP5-5Q701N2 237 aaPredicted RBP2.26□□□□□ -2.05
MAP1LC3B-205ENST00000564638 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
MAP1LC3B-205ENST00000564638 MT1AP04731 61 aa2.24□□□□□ -2.05
MAP1LC3B-205ENST00000564638 KRTAP12-4P60329 112 aa2.21□□□□□ -2.06
MAP1LC3B-205ENST00000564638 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
MAP1LC3B-205ENST00000564638 KRTAP6-1Q3LI64 71 aa2.19□□□□□ -2.06
MAP1LC3B-205ENST00000564638 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
MAP1LC3B-205ENST00000564638 SYNE1Q8NF91 8797 aaKnown RBP2.14□□□□□ -2.07
MAP1LC3B-205ENST00000564638 LCE3EQ5T5B0 92 aa2.07□□□□□ -2.08
MAP1LC3B-205ENST00000564638 OBSCNQ5VST9 7968 aa2.06□□□□□ -2.08
MAP1LC3B-205ENST00000564638 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
MAP1LC3B-205ENST00000564638 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
MAP1LC3B-205ENST00000564638 KRTAP6-2Q3LI66 62 aa2.03□□□□□ -2.08
MAP1LC3B-205ENST00000564638 LCE3DQ9BYE3 92 aa2.02□□□□□ -2.09
MAP1LC3B-205ENST00000564638 KRTAP5-1Q6L8H4 278 aa1.9□□□□□ -2.11
MAP1LC3B-205ENST00000564638 PRM1P04553 51 aa1.79□□□□□ -2.12
MAP1LC3B-205ENST00000564638 LCE1BQ5T7P3 118 aa1.71□□□□□ -2.14
MAP1LC3B-205ENST00000564638 KRTAP4-4Q9BYR3 166 aa1.7□□□□□ -2.14
MAP1LC3B-205ENST00000564638 LCE1CQ5T751 118 aa1.63□□□□□ -2.15
MAP1LC3B-205ENST00000564638 PHGR1C9JFL3 82 aa1.54□□□□□ -2.16
MAP1LC3B-205ENST00000564638 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
MAP1LC3B-205ENST00000564638 MUC19Q7Z5P9 8384 aa1.28□□□□□ -2.2
MAP1LC3B-205ENST00000564638 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
MAP1LC3B-205ENST00000564638 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 176.5 ms