RNA–Protein interactions for RNA: ENST00000563964.5

LAT-208, Transcript of linker for activation of T cells, human

TSL 5

Gene LAT, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAT-208	ENST00000563964	KRTAP4-3	Q9BYR4	195 aa		8.16	□□□□□ -1.1
LAT-208	ENST00000563964	MT4	P47944	62 aa		8.12	□□□□□ -1.11
LAT-208	ENST00000563964	LINC01558	Q9Y6Z2	57 aa		8.11	□□□□□ -1.11
LAT-208	ENST00000563964	HMCN1	Q96RW7	5635 aa		8.09	□□□□□ -1.11
LAT-208	ENST00000563964	KRTAP5-4	Q6L8H1	288 aa		8	□□□□□ -1.13
LAT-208	ENST00000563964	KRTAP12-3	P60328	96 aa		7.97	□□□□□ -1.13
LAT-208	ENST00000563964	UQCR11	O14957	56 aa		7.95	□□□□□ -1.14
LAT-208	ENST00000563964	KRTAP4-7	Q9BYR0	210 aa		7.94	□□□□□ -1.14
LAT-208	ENST00000563964	TMEM258	P61165	79 aa		7.89	□□□□□ -1.15
LAT-208	ENST00000563964	KRTAP4-6	Q9BYQ5	205 aa		7.88	□□□□□ -1.15
LAT-208	ENST00000563964	AHNAK2	Q8IVF2	5795 aa		7.84	□□□□□ -1.15
LAT-208	ENST00000563964	MIR22HG	Q0VDD5	57 aa		7.75	□□□□□ -1.17
LAT-208	ENST00000563964	KRTAP25-1	Q3LHN0	102 aa		7.75	□□□□□ -1.17
LAT-208	ENST00000563964	KRTAP5-10	Q6L8G5	202 aa		7.69	□□□□□ -1.18
LAT-208	ENST00000563964	KRTAP5-5	Q701N2	237 aa	Predicted RBP	7.64	□□□□□ -1.19
LAT-208	ENST00000563964		K7ERS5	55 aa		7.63	□□□□□ -1.19
LAT-208	ENST00000563964	KRTAP20-2	Q3LI61	65 aa		7.57	□□□□□ -1.2
LAT-208	ENST00000563964	PSPHP1	O15172	72 aa		7.54	□□□□□ -1.2
LAT-208	ENST00000563964	LOC100996750	A0A140TA64	210 aa		7.53	□□□□□ -1.2
LAT-208	ENST00000563964	SPRR5	A0A1B0GTR4	108 aa		7.51	□□□□□ -1.21
LAT-208	ENST00000563964		V9GYY9	64 aa		7.5	□□□□□ -1.21
LAT-208	ENST00000563964	KRTAP19-4	Q3LI73	84 aa		7.49	□□□□□ -1.21
LAT-208	ENST00000563964	KRTAP5-3	Q6L8H2	238 aa		7.49	□□□□□ -1.21
LAT-208	ENST00000563964	KRTAP12-4	P60329	112 aa		7.47	□□□□□ -1.21
LAT-208	ENST00000563964		Q1T7F1	81 aa		7.46	□□□□□ -1.22
LAT-208	ENST00000563964	KRTAP23-1	A1A580	65 aa		7.44	□□□□□ -1.22
LAT-208	ENST00000563964	KRTAP15-1	Q3LI76	137 aa		7.41	□□□□□ -1.22
LAT-208	ENST00000563964	KRTAP5-7	Q6L8G8	165 aa		7.4	□□□□□ -1.22
LAT-208	ENST00000563964	SYNE1	Q8NF91	8797 aa	Known RBP	7.36	□□□□□ -1.23
LAT-208	ENST00000563964	LCE3C	Q5T5A8	94 aa		7.34	□□□□□ -1.23
LAT-208	ENST00000563964		A6NED7	52 aa		7.27	□□□□□ -1.25
LAT-208	ENST00000563964	CDC42SE1	Q9NRR8	79 aa		7.21	□□□□□ -1.26
LAT-208	ENST00000563964	ROMO1	P60602	79 aa		7.09	□□□□□ -1.27
LAT-208	ENST00000563964	MT1A	P04731	61 aa		7.08	□□□□□ -1.28
LAT-208	ENST00000563964	KRTAP6-1	Q3LI64	71 aa		7.06	□□□□□ -1.28
LAT-208	ENST00000563964	RPS28	P62857	69 aa	Known RBP	7.03	□□□□□ -1.28
LAT-208	ENST00000563964	KRTAP5-2	Q701N4	177 aa		6.99	□□□□□ -1.29
LAT-208	ENST00000563964	KRTAP9-6	A8MVA2	160 aa		6.94	□□□□□ -1.3
LAT-208	ENST00000563964	KRTAP4-11	Q9BYQ6	195 aa		6.94	□□□□□ -1.3
LAT-208	ENST00000563964	KRTAP9-4	Q9BYQ2	154 aa		6.86	□□□□□ -1.31
LAT-208	ENST00000563964	KRTAP6-2	Q3LI66	62 aa		6.77	□□□□□ -1.33
LAT-208	ENST00000563964	KRTAP5-8	O75690	187 aa		6.71	□□□□□ -1.34
LAT-208	ENST00000563964	OBSCN	Q5VST9	7968 aa		6.64	□□□□□ -1.35
LAT-208	ENST00000563964	PCP4	P48539	62 aa		6.62	□□□□□ -1.35
LAT-208	ENST00000563964	MT3	P25713	68 aa		6.48	□□□□□ -1.37
LAT-208	ENST00000563964	AHNAK	Q09666	5890 aa	Known RBP	6.47	□□□□□ -1.37
LAT-208	ENST00000563964	MUC5AC	P98088	5654 aa		6.46	□□□□□ -1.38
LAT-208	ENST00000563964	MUC5B	Q9HC84	5762 aa	Predicted RBP	6.45	□□□□□ -1.38
LAT-208	ENST00000563964	KRTAP9-9	Q9BYP9	154 aa		6.38	□□□□□ -1.39
LAT-208	ENST00000563964	KRTAP5-1	Q6L8H4	278 aa		6.3	□□□□□ -1.4
LAT-208	ENST00000563964	BRK1	Q8WUW1	75 aa		6.03	□□□□□ -1.44
LAT-208	ENST00000563964	LCE1E	Q5T753	118 aa		5.97	□□□□□ -1.45
LAT-208	ENST00000563964	KRTAP4-2	Q9BYR5	136 aa		5.67	□□□□□ -1.5
LAT-208	ENST00000563964	LCE1B	Q5T7P3	118 aa		5.66	□□□□□ -1.5
LAT-208	ENST00000563964	PMAIP1	Q13794	54 aa		5.65	□□□□□ -1.5
LAT-208	ENST00000563964	LCE1C	Q5T751	118 aa		5.55	□□□□□ -1.52
LAT-208	ENST00000563964	PRAC1	Q96KF2	57 aa		5.52	□□□□□ -1.53
LAT-208	ENST00000563964	LCE3D	Q9BYE3	92 aa		5.26	□□□□□ -1.57
LAT-208	ENST00000563964	KRTAP4-12	Q9BQ66	201 aa		5.2	□□□□□ -1.58
LAT-208	ENST00000563964	KRTAP5-11	Q6L8G4	156 aa		5.03	□□□□□ -1.6
LAT-208	ENST00000563964	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	5.02	□□□□□ -1.61
LAT-208	ENST00000563964	PRO0628	Q9UI54	55 aa		5.01	□□□□□ -1.61
LAT-208	ENST00000563964	LCE3E	Q5T5B0	92 aa		4.93	□□□□□ -1.62
LAT-208	ENST00000563964	LCE1F	Q5T754	118 aa		4.92	□□□□□ -1.62
LAT-208	ENST00000563964	KTN1-AS1	Q86SY8	53 aa		4.86	□□□□□ -1.63
LAT-208	ENST00000563964	SVIP	Q8NHG7	77 aa		4.72	□□□□□ -1.65
LAT-208	ENST00000563964	LUZP6	Q538Z0	58 aa		4.67	□□□□□ -1.66
LAT-208	ENST00000563964	KRTAP21-2	Q3LI59	83 aa		4.65	□□□□□ -1.67
LAT-208	ENST00000563964	PHGR1	C9JFL3	82 aa		4.49	□□□□□ -1.69
LAT-208	ENST00000563964	KRTAP4-4	Q9BYR3	166 aa		4.3	□□□□□ -1.72
LAT-208	ENST00000563964	MUC19	Q7Z5P9	8384 aa		4.08	□□□□□ -1.76
LAT-208	ENST00000563964	PRM1	P04553	51 aa		3.62	□□□□□ -1.83
LAT-208	ENST00000563964	NDUFAF8	A1L188	74 aa		3.51	□□□□□ -1.85
LAT-208	ENST00000563964	KRTAP21-1	Q3LI58	79 aa		3.4	□□□□□ -1.87
LAT-208	ENST00000563964		H3BS24	57 aa		2.96	□□□□□ -1.94
LAT-208	ENST00000563964	MUC16	Q8WXI7	14507 aa		2.82	□□□□□ -1.96
LAT-208	ENST00000563964	INE1	O15225	51 aa		2.73	□□□□□ -1.97
LAT-208	ENST00000563964		A0A0A0MQY5	61 aa		2.56	□□□□□ -2

Retrieved 78 of 20,778 RNA–protein pairs in 62 ms