RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 PRO2289Q9P1D8 64 aa2.58□□□□□ -2
CNOT1-204ENST00000563130 MIR22HGQ0VDD5 57 aa2.56□□□□□ -2
CNOT1-204ENST00000563130 SPINT4Q6UDR6 99 aa2.56□□□□□ -2
CNOT1-204ENST00000563130 CDC42SE1Q9NRR8 79 aa2.53□□□□□ -2
CNOT1-204ENST00000563130 KMT2DO14686 5537 aa2.53□□□□□ -2
CNOT1-204ENST00000563130 KRTAP12-2P59991 146 aa2.53□□□□□ -2
CNOT1-204ENST00000563130 KRTAP5-9P26371 169 aa2.52□□□□□ -2.01
CNOT1-204ENST00000563130 MUC12Q9UKN1 5478 aa2.52□□□□□ -2.01
CNOT1-204ENST00000563130 A0A1B0GU69 56 aa2.5□□□□□ -2.01
CNOT1-204ENST00000563130 SPATA8Q6RVD6 105 aa2.5□□□□□ -2.01
CNOT1-204ENST00000563130 LINC01558Q9Y6Z2 57 aa2.47□□□□□ -2.01
CNOT1-204ENST00000563130 NEBP20929 6669 aa2.47□□□□□ -2.01
CNOT1-204ENST00000563130 A0A0D9SG42 100 aa2.47□□□□□ -2.01
CNOT1-204ENST00000563130 KRTAP12-1P59990 96 aa2.45□□□□□ -2.02
CNOT1-204ENST00000563130 MDN1Q9NU22 5596 aa2.45□□□□□ -2.02
CNOT1-204ENST00000563130 LCE3CQ5T5A8 94 aa2.45□□□□□ -2.02
CNOT1-204ENST00000563130 KRTAP8-1Q8IUC2 63 aa2.44□□□□□ -2.02
CNOT1-204ENST00000563130 PRR15LQ9BU68 103 aa2.44□□□□□ -2.02
CNOT1-204ENST00000563130 A8MU10 97 aa2.43□□□□□ -2.02
CNOT1-204ENST00000563130 KRTAP9-6A8MVA2 160 aa2.43□□□□□ -2.02
CNOT1-204ENST00000563130 SPRR2FQ96RM1 72 aa2.43□□□□□ -2.02
CNOT1-204ENST00000563130 UQCR11O14957 56 aa2.38□□□□□ -2.03
CNOT1-204ENST00000563130 SPRR2EP22531 72 aa2.37□□□□□ -2.03
CNOT1-204ENST00000563130 SPRR2BP35325 72 aa2.37□□□□□ -2.03
CNOT1-204ENST00000563130 SPRR2AP35326 72 aa2.37□□□□□ -2.03
CNOT1-204ENST00000563130 C10orf95Q9H7T3 257 aa2.34□□□□□ -2.03
CNOT1-204ENST00000563130 KRTAP19-7Q3SYF9 63 aa2.34□□□□□ -2.04
CNOT1-204ENST00000563130 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
CNOT1-204ENST00000563130 KRTAP20-1Q3LI63 56 aa2.32□□□□□ -2.04
CNOT1-204ENST00000563130 MT1EP04732 61 aa2.3□□□□□ -2.04
CNOT1-204ENST00000563130 TNP1P09430 55 aa2.3□□□□□ -2.04
CNOT1-204ENST00000563130 KRTAP2-3P0C7H8 128 aa2.3□□□□□ -2.04
CNOT1-204ENST00000563130 KRTAP2-4Q9BYR9 128 aa2.3□□□□□ -2.04
CNOT1-204ENST00000563130 SPRR2DP22532 72 aa2.28□□□□□ -2.04
CNOT1-204ENST00000563130 KRTAP19-5Q3LI72 72 aa2.28□□□□□ -2.05
CNOT1-204ENST00000563130 LCE3AQ5TA76 89 aa2.26□□□□□ -2.05
CNOT1-204ENST00000563130 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
CNOT1-204ENST00000563130 KRTAP19-3Q7Z4W3 81 aa2.26□□□□□ -2.05
CNOT1-204ENST00000563130 KRTAP2-1Q9BYU5 128 aa2.24□□□□□ -2.05
CNOT1-204ENST00000563130 DSTQ03001 7570 aaKnown RBP2.23□□□□□ -2.05
CNOT1-204ENST00000563130 LCE3EQ5T5B0 92 aa2.22□□□□□ -2.05
CNOT1-204ENST00000563130 MT1GP13640 62 aa2.22□□□□□ -2.05
CNOT1-204ENST00000563130 MT1LQ93083 61 aa2.21□□□□□ -2.06
CNOT1-204ENST00000563130 KRTAP12-3P60328 96 aa2.19□□□□□ -2.06
CNOT1-204ENST00000563130 INE1O15225 51 aa2.18□□□□□ -2.06
CNOT1-204ENST00000563130 PP632Q6XCG6 107 aa2.18□□□□□ -2.06
CNOT1-204ENST00000563130 MT1MQ8N339 61 aa2.18□□□□□ -2.06
CNOT1-204ENST00000563130 KRTAP5-4Q6L8H1 288 aa2.15□□□□□ -2.07
CNOT1-204ENST00000563130 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
CNOT1-204ENST00000563130 KRTAP4-3Q9BYR4 195 aa2.12□□□□□ -2.07
CNOT1-204ENST00000563130 KRTAP5-5Q701N2 237 aaPredicted RBP2.01□□□□□ -2.09
CNOT1-204ENST00000563130 SPRR5A0A1B0GTR4 108 aa2□□□□□ -2.09
CNOT1-204ENST00000563130 MT4P47944 62 aa1.98□□□□□ -2.09
CNOT1-204ENST00000563130 OBSCNQ5VST9 7968 aa1.97□□□□□ -2.09
CNOT1-204ENST00000563130 SYNE1Q8NF91 8797 aaKnown RBP1.95□□□□□ -2.1
CNOT1-204ENST00000563130 KRTAP20-2Q3LI61 65 aa1.91□□□□□ -2.1
CNOT1-204ENST00000563130 GPR98Q8WXG9 6306 aa1.9□□□□□ -2.11
CNOT1-204ENST00000563130 KRTAP12-4P60329 112 aa1.9□□□□□ -2.11
CNOT1-204ENST00000563130 MT1AP04731 61 aa1.88□□□□□ -2.11
CNOT1-204ENST00000563130 KRTAP6-1Q3LI64 71 aa1.87□□□□□ -2.11
CNOT1-204ENST00000563130 AHNAK2Q8IVF2 5795 aa1.86□□□□□ -2.11
CNOT1-204ENST00000563130 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.12
CNOT1-204ENST00000563130 LCE3DQ9BYE3 92 aa1.82□□□□□ -2.12
CNOT1-204ENST00000563130 KRTAP5-2Q701N4 177 aa1.81□□□□□ -2.12
CNOT1-204ENST00000563130 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
CNOT1-204ENST00000563130 LCE1BQ5T7P3 118 aa1.8□□□□□ -2.12
CNOT1-204ENST00000563130 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
CNOT1-204ENST00000563130 KRTAP6-2Q3LI66 62 aa1.75□□□□□ -2.13
CNOT1-204ENST00000563130 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
CNOT1-204ENST00000563130 KRTAP5-8O75690 187 aa1.67□□□□□ -2.14
CNOT1-204ENST00000563130 MUC5ACP98088 5654 aa1.55□□□□□ -2.16
CNOT1-204ENST00000563130 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.16
CNOT1-204ENST00000563130 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
CNOT1-204ENST00000563130 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
CNOT1-204ENST00000563130 PHGR1C9JFL3 82 aa1.13□□□□□ -2.23
CNOT1-204ENST00000563130 PRM1P04553 51 aa1.09□□□□□ -2.23
CNOT1-204ENST00000563130 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
CNOT1-204ENST00000563130 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 12.1 ms