RNA–Protein interactions for RNA: ENST00000563003.1

AC040174.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC040174.1, Length 2,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040174.1-201ENST00000563003 KRTAP2-1Q9BYU5 128 aa4.87□□□□□ -1.63
AC040174.1-201ENST00000563003 LOC100996750A0A140TA64 210 aa4.85□□□□□ -1.63
AC040174.1-201ENST00000563003 KRTAP4-6Q9BYQ5 205 aa4.85□□□□□ -1.63
AC040174.1-201ENST00000563003 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.63
AC040174.1-201ENST00000563003 KRTAP4-8Q9BYQ9 185 aa4.84□□□□□ -1.63
AC040174.1-201ENST00000563003 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
AC040174.1-201ENST00000563003 KRTAP4-7Q9BYR0 210 aa4.73□□□□□ -1.65
AC040174.1-201ENST00000563003 KRTAP19-7Q3SYF9 63 aa4.72□□□□□ -1.65
AC040174.1-201ENST00000563003 KRTAP6-3Q3LI67 103 aa4.62□□□□□ -1.67
AC040174.1-201ENST00000563003 MUC12Q9UKN1 5478 aa4.62□□□□□ -1.67
AC040174.1-201ENST00000563003 MT1EP04732 61 aa4.62□□□□□ -1.67
AC040174.1-201ENST00000563003 KRTAP19-4Q3LI73 84 aa4.59□□□□□ -1.67
AC040174.1-201ENST00000563003 MT1LQ93083 61 aa4.56□□□□□ -1.68
AC040174.1-201ENST00000563003 MDN1Q9NU22 5596 aa4.53□□□□□ -1.68
AC040174.1-201ENST00000563003 NEBP20929 6669 aa4.51□□□□□ -1.69
AC040174.1-201ENST00000563003 KRTAP5-9P26371 169 aa4.51□□□□□ -1.69
AC040174.1-201ENST00000563003 SPRR2FQ96RM1 72 aa4.45□□□□□ -1.7
AC040174.1-201ENST00000563003 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
AC040174.1-201ENST00000563003 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.7
AC040174.1-201ENST00000563003 MT1GP13640 62 aa4.39□□□□□ -1.71
AC040174.1-201ENST00000563003 MT1MQ8N339 61 aa4.34□□□□□ -1.72
AC040174.1-201ENST00000563003 SPRR2EP22531 72 aa4.33□□□□□ -1.72
AC040174.1-201ENST00000563003 SPRR2BP35325 72 aa4.33□□□□□ -1.72
AC040174.1-201ENST00000563003 SPRR2AP35326 72 aa4.33□□□□□ -1.72
AC040174.1-201ENST00000563003 KRTAP4-3Q9BYR4 195 aa4.31□□□□□ -1.72
AC040174.1-201ENST00000563003 LCE1AQ5T7P2 110 aa4.3□□□□□ -1.72
AC040174.1-201ENST00000563003 LCE5AQ5TCM9 118 aa4.3□□□□□ -1.72
AC040174.1-201ENST00000563003 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
AC040174.1-201ENST00000563003 KRTAP20-1Q3LI63 56 aa4.22□□□□□ -1.73
AC040174.1-201ENST00000563003 SPRR2DP22532 72 aa4.17□□□□□ -1.74
AC040174.1-201ENST00000563003 KRTAP5-3Q6L8H2 238 aa4.12□□□□□ -1.75
AC040174.1-201ENST00000563003 KRTAP4-9Q9BYQ8 210 aa4.1□□□□□ -1.75
AC040174.1-201ENST00000563003 LCE3BQ5TA77 95 aa4.08□□□□□ -1.76
AC040174.1-201ENST00000563003 SYNE1Q8NF91 8797 aaKnown RBP4.03□□□□□ -1.76
AC040174.1-201ENST00000563003 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
AC040174.1-201ENST00000563003 MT1AP04731 61 aa3.99□□□□□ -1.77
AC040174.1-201ENST00000563003 PRM1P04553 51 aa3.97□□□□□ -1.77
AC040174.1-201ENST00000563003 KRTAP5-5Q701N2 237 aaPredicted RBP3.95□□□□□ -1.78
AC040174.1-201ENST00000563003 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
AC040174.1-201ENST00000563003 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
AC040174.1-201ENST00000563003 KRTAP6-1Q3LI64 71 aa3.87□□□□□ -1.79
AC040174.1-201ENST00000563003 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
AC040174.1-201ENST00000563003 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
AC040174.1-201ENST00000563003 HMCN1Q96RW7 5635 aa3.69□□□□□ -1.82
AC040174.1-201ENST00000563003 LCE1DQ5T752 114 aa3.68□□□□□ -1.82
AC040174.1-201ENST00000563003 MT4P47944 62 aa3.68□□□□□ -1.82
AC040174.1-201ENST00000563003 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
AC040174.1-201ENST00000563003 KRTAP9-4Q9BYQ2 154 aa3.67□□□□□ -1.82
AC040174.1-201ENST00000563003 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
AC040174.1-201ENST00000563003 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.82
AC040174.1-201ENST00000563003 LCE4AQ5TA78 99 aa3.64□□□□□ -1.83
AC040174.1-201ENST00000563003 KRTAP4-12Q9BQ66 201 aa3.52□□□□□ -1.85
AC040174.1-201ENST00000563003 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
AC040174.1-201ENST00000563003 MT3P25713 68 aa3.51□□□□□ -1.85
AC040174.1-201ENST00000563003 KRTAP20-2Q3LI61 65 aa3.46□□□□□ -1.86
AC040174.1-201ENST00000563003 AHNAK2Q8IVF2 5795 aa3.46□□□□□ -1.86
AC040174.1-201ENST00000563003 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
AC040174.1-201ENST00000563003 KRTAP5-2Q701N4 177 aa3.31□□□□□ -1.88
AC040174.1-201ENST00000563003 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
AC040174.1-201ENST00000563003 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
AC040174.1-201ENST00000563003 KRTAP5-7Q6L8G8 165 aa3.12□□□□□ -1.91
AC040174.1-201ENST00000563003 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
AC040174.1-201ENST00000563003 KRTAP5-8O75690 187 aa3.01□□□□□ -1.93
AC040174.1-201ENST00000563003 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
AC040174.1-201ENST00000563003 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
AC040174.1-201ENST00000563003 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
AC040174.1-201ENST00000563003 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.96
AC040174.1-201ENST00000563003 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
AC040174.1-201ENST00000563003 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
AC040174.1-201ENST00000563003 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
AC040174.1-201ENST00000563003 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2.01
AC040174.1-201ENST00000563003 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
AC040174.1-201ENST00000563003 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
AC040174.1-201ENST00000563003 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
AC040174.1-201ENST00000563003 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
AC040174.1-201ENST00000563003 PHGR1C9JFL3 82 aa2.09□□□□□ -2.07
AC040174.1-201ENST00000563003 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 145.3 ms