RNA–Protein interactions for RNA: ENST00000562656.1

AC009055.1-201, humanhuman

TSL 3 BASIC

Gene AC009055.1, Length 781 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009055.1-201ENST00000562656 PCP4P48539 62 aa4.53□□□□□ -1.68
AC009055.1-201ENST00000562656 ANAPC13Q9BS18 74 aa4.53□□□□□ -1.68
AC009055.1-201ENST00000562656 KRTAP4-3Q9BYR4 195 aa4.51□□□□□ -1.69
AC009055.1-201ENST00000562656 ATP5EP56381 51 aaPredicted RBP4.49□□□□□ -1.69
AC009055.1-201ENST00000562656 LINC01558Q9Y6Z2 57 aa4.46□□□□□ -1.7
AC009055.1-201ENST00000562656 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
AC009055.1-201ENST00000562656 CCDC179H3BU77 68 aa4.43□□□□□ -1.7
AC009055.1-201ENST00000562656 KRTAP4-6Q9BYQ5 205 aa4.42□□□□□ -1.7
AC009055.1-201ENST00000562656 AHNAK2Q8IVF2 5795 aa4.41□□□□□ -1.7
AC009055.1-201ENST00000562656 UQCR11O14957 56 aa4.38□□□□□ -1.71
AC009055.1-201ENST00000562656 KRTAP5-10Q6L8G5 202 aa4.38□□□□□ -1.71
AC009055.1-201ENST00000562656 KRTAP4-7Q9BYR0 210 aa4.38□□□□□ -1.71
AC009055.1-201ENST00000562656 LOC100996750A0A140TA64 210 aa4.34□□□□□ -1.71
AC009055.1-201ENST00000562656 KRTAP25-1Q3LHN0 102 aa4.32□□□□□ -1.72
AC009055.1-201ENST00000562656 TMEM258P61165 79 aa4.3□□□□□ -1.72
AC009055.1-201ENST00000562656 KRTAP5-5Q701N2 237 aaPredicted RBP4.3□□□□□ -1.72
AC009055.1-201ENST00000562656 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.72
AC009055.1-201ENST00000562656 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
AC009055.1-201ENST00000562656 KRTAP20-2Q3LI61 65 aa4.27□□□□□ -1.73
AC009055.1-201ENST00000562656 MIR22HGQ0VDD5 57 aa4.25□□□□□ -1.73
AC009055.1-201ENST00000562656 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
AC009055.1-201ENST00000562656 KRTAP5-7Q6L8G8 165 aa4.24□□□□□ -1.73
AC009055.1-201ENST00000562656 K7ERS5 55 aa4.23□□□□□ -1.73
AC009055.1-201ENST00000562656 KRTAP12-4P60329 112 aa4.23□□□□□ -1.73
AC009055.1-201ENST00000562656 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
AC009055.1-201ENST00000562656 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.75
AC009055.1-201ENST00000562656 V9GYY9 64 aa4.13□□□□□ -1.75
AC009055.1-201ENST00000562656 KRTAP15-1Q3LI76 137 aa4.12□□□□□ -1.75
AC009055.1-201ENST00000562656 RPS28P62857 69 aaKnown RBP4.08□□□□□ -1.76
AC009055.1-201ENST00000562656 LCE3CQ5T5A8 94 aa4.08□□□□□ -1.76
AC009055.1-201ENST00000562656 PSPHP1O15172 72 aa4.07□□□□□ -1.76
AC009055.1-201ENST00000562656 Q1T7F1 81 aa4.07□□□□□ -1.76
AC009055.1-201ENST00000562656 MT1AP04731 61 aa3.97□□□□□ -1.77
AC009055.1-201ENST00000562656 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
AC009055.1-201ENST00000562656 KRTAP5-2Q701N4 177 aa3.96□□□□□ -1.78
AC009055.1-201ENST00000562656 A6NED7 52 aa3.94□□□□□ -1.78
AC009055.1-201ENST00000562656 KRTAP4-11Q9BYQ6 195 aa3.93□□□□□ -1.78
AC009055.1-201ENST00000562656 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
AC009055.1-201ENST00000562656 ROMO1P60602 79 aa3.89□□□□□ -1.79
AC009055.1-201ENST00000562656 KRTAP9-4Q9BYQ2 154 aa3.85□□□□□ -1.79
AC009055.1-201ENST00000562656 AHNAKQ09666 5890 aaKnown RBP3.83□□□□□ -1.8
AC009055.1-201ENST00000562656 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
AC009055.1-201ENST00000562656 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
AC009055.1-201ENST00000562656 KRTAP5-8O75690 187 aa3.8□□□□□ -1.8
AC009055.1-201ENST00000562656 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
AC009055.1-201ENST00000562656 MUC5ACP98088 5654 aa3.76□□□□□ -1.81
AC009055.1-201ENST00000562656 MUC5BQ9HC84 5762 aaPredicted RBP3.72□□□□□ -1.81
AC009055.1-201ENST00000562656 BRK1Q8WUW1 75 aa3.69□□□□□ -1.82
AC009055.1-201ENST00000562656 KRTAP9-9Q9BYP9 154 aa3.69□□□□□ -1.82
AC009055.1-201ENST00000562656 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
AC009055.1-201ENST00000562656 PRO0628Q9UI54 55 aa3.66□□□□□ -1.82
AC009055.1-201ENST00000562656 MT3P25713 68 aa3.65□□□□□ -1.83
AC009055.1-201ENST00000562656 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
AC009055.1-201ENST00000562656 PMAIP1Q13794 54 aa3.49□□□□□ -1.85
AC009055.1-201ENST00000562656 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
AC009055.1-201ENST00000562656 H3BS24 57 aa3.37□□□□□ -1.87
AC009055.1-201ENST00000562656 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
AC009055.1-201ENST00000562656 KTN1-AS1Q86SY8 53 aa3.36□□□□□ -1.87
AC009055.1-201ENST00000562656 PRAC1Q96KF2 57 aa3.26□□□□□ -1.89
AC009055.1-201ENST00000562656 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
AC009055.1-201ENST00000562656 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
AC009055.1-201ENST00000562656 A0A0A0MQY5 61 aa2.99□□□□□ -1.93
AC009055.1-201ENST00000562656 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
AC009055.1-201ENST00000562656 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
AC009055.1-201ENST00000562656 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
AC009055.1-201ENST00000562656 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
AC009055.1-201ENST00000562656 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
AC009055.1-201ENST00000562656 LUZP6Q538Z0 58 aa2.7□□□□□ -1.98
AC009055.1-201ENST00000562656 NDUFAF8A1L188 74 aa2.67□□□□□ -1.98
AC009055.1-201ENST00000562656 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
AC009055.1-201ENST00000562656 PHGR1C9JFL3 82 aa2.56□□□□□ -2
AC009055.1-201ENST00000562656 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
AC009055.1-201ENST00000562656 INE1O15225 51 aa2.29□□□□□ -2.04
AC009055.1-201ENST00000562656 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
AC009055.1-201ENST00000562656 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
AC009055.1-201ENST00000562656 PRM1P04553 51 aa1.95□□□□□ -2.1
AC009055.1-201ENST00000562656 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 112.7 ms