RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
BBS4-205ENST00000562219 KTN1-AS1Q86SY8 53 aa3.79□□□□□ -1.8
BBS4-205ENST00000562219 HMCN1Q96RW7 5635 aa3.78□□□□□ -1.8
BBS4-205ENST00000562219 CHKB-CPT1BH3BT56 60 aa3.76□□□□□ -1.81
BBS4-205ENST00000562219 PRR15LQ9BU68 103 aa3.76□□□□□ -1.81
BBS4-205ENST00000562219 MT4P47944 62 aa3.75□□□□□ -1.81
BBS4-205ENST00000562219 CDC42SE1Q9NRR8 79 aa3.75□□□□□ -1.81
BBS4-205ENST00000562219 MT1GP13640 62 aa3.74□□□□□ -1.81
BBS4-205ENST00000562219 KRTAP13-4Q3LI77 160 aa3.74□□□□□ -1.81
BBS4-205ENST00000562219 COA5Q86WW8 74 aa3.74□□□□□ -1.81
BBS4-205ENST00000562219 LINC01558Q9Y6Z2 57 aa3.74□□□□□ -1.81
BBS4-205ENST00000562219 A6NED7 52 aa3.72□□□□□ -1.81
BBS4-205ENST00000562219 PP632Q6XCG6 107 aa3.72□□□□□ -1.81
BBS4-205ENST00000562219 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
BBS4-205ENST00000562219 KRTAP19-5Q3LI72 72 aa3.7□□□□□ -1.82
BBS4-205ENST00000562219 A8MU10 97 aa3.69□□□□□ -1.82
BBS4-205ENST00000562219 KRTAP5-10Q6L8G5 202 aa3.69□□□□□ -1.82
BBS4-205ENST00000562219 A0A0D9SG42 100 aa3.68□□□□□ -1.82
BBS4-205ENST00000562219 MT1MQ8N339 61 aa3.68□□□□□ -1.82
BBS4-205ENST00000562219 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
BBS4-205ENST00000562219 KRTAP5-3Q6L8H2 238 aa3.66□□□□□ -1.82
BBS4-205ENST00000562219 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.83
BBS4-205ENST00000562219 MT1LQ93083 61 aa3.63□□□□□ -1.83
BBS4-205ENST00000562219 KRTAP5-7Q6L8G8 165 aa3.58□□□□□ -1.84
BBS4-205ENST00000562219 KRTAP4-3Q9BYR4 195 aa3.58□□□□□ -1.84
BBS4-205ENST00000562219 SPATA8Q6RVD6 105 aa3.56□□□□□ -1.84
BBS4-205ENST00000562219 SPINT4Q6UDR6 99 aa3.56□□□□□ -1.84
BBS4-205ENST00000562219 KRTAP12-1P59990 96 aa3.53□□□□□ -1.84
BBS4-205ENST00000562219 A0A1B0GU69 56 aa3.52□□□□□ -1.85
BBS4-205ENST00000562219 C10orf95Q9H7T3 257 aa3.52□□□□□ -1.85
BBS4-205ENST00000562219 UQCR11O14957 56 aa3.51□□□□□ -1.85
BBS4-205ENST00000562219 KRTAP15-1Q3LI76 137 aa3.5□□□□□ -1.85
BBS4-205ENST00000562219 A0A0A0MQY5 61 aa3.49□□□□□ -1.85
BBS4-205ENST00000562219 MIR22HGQ0VDD5 57 aa3.49□□□□□ -1.85
BBS4-205ENST00000562219 LCE3AQ5TA76 89 aa3.49□□□□□ -1.85
BBS4-205ENST00000562219 A0A1B0GU33 70 aa3.48□□□□□ -1.85
BBS4-205ENST00000562219 KRTAP20-2Q3LI61 65 aa3.46□□□□□ -1.86
BBS4-205ENST00000562219 PRAC1Q96KF2 57 aa3.46□□□□□ -1.86
BBS4-205ENST00000562219 TNP1P09430 55 aa3.43□□□□□ -1.86
BBS4-205ENST00000562219 SPRR5A0A1B0GTR4 108 aa3.42□□□□□ -1.86
BBS4-205ENST00000562219 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.87
BBS4-205ENST00000562219 KRTAP12-3P60328 96 aa3.37□□□□□ -1.87
BBS4-205ENST00000562219 KRTAP12-4P60329 112 aa3.37□□□□□ -1.87
BBS4-205ENST00000562219 KRTAP25-1Q3LHN0 102 aa3.33□□□□□ -1.88
BBS4-205ENST00000562219 K7ERS5 55 aa3.28□□□□□ -1.88
BBS4-205ENST00000562219 ROMO1P60602 79 aa3.28□□□□□ -1.88
BBS4-205ENST00000562219 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
BBS4-205ENST00000562219 KRTAP5-2Q701N4 177 aa3.16□□□□□ -1.9
BBS4-205ENST00000562219 KRTAP5-8O75690 187 aa3.12□□□□□ -1.91
BBS4-205ENST00000562219 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
BBS4-205ENST00000562219 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
BBS4-205ENST00000562219 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
BBS4-205ENST00000562219 MT1AP04731 61 aa3.08□□□□□ -1.92
BBS4-205ENST00000562219 KRTAP6-1Q3LI64 71 aa3.08□□□□□ -1.92
BBS4-205ENST00000562219 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
BBS4-205ENST00000562219 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
BBS4-205ENST00000562219 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
BBS4-205ENST00000562219 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
BBS4-205ENST00000562219 KRTAP9-6A8MVA2 160 aa2.9□□□□□ -1.95
BBS4-205ENST00000562219 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
BBS4-205ENST00000562219 MT3P25713 68 aa2.83□□□□□ -1.96
BBS4-205ENST00000562219 LUZP6Q538Z0 58 aa2.8□□□□□ -1.96
BBS4-205ENST00000562219 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
BBS4-205ENST00000562219 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
BBS4-205ENST00000562219 INE1O15225 51 aa2.54□□□□□ -2
BBS4-205ENST00000562219 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
BBS4-205ENST00000562219 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
BBS4-205ENST00000562219 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
BBS4-205ENST00000562219 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
BBS4-205ENST00000562219 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
BBS4-205ENST00000562219 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
BBS4-205ENST00000562219 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
BBS4-205ENST00000562219 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
BBS4-205ENST00000562219 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
BBS4-205ENST00000562219 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
BBS4-205ENST00000562219 PRM1P04553 51 aa1.69□□□□□ -2.14
BBS4-205ENST00000562219 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
BBS4-205ENST00000562219 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 120.9 ms