RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 KRTAP19-5Q3LI72 72 aa3.61□□□□□ -1.83
TCF4-211ENST00000561992 KRTAP5-3Q6L8H2 238 aa3.61□□□□□ -1.83
TCF4-211ENST00000561992 SSPOA2VEC9 5147 aa3.59□□□□□ -1.83
TCF4-211ENST00000561992 FCGBPQ9Y6R7 5405 aaPredicted RBP3.58□□□□□ -1.84
TCF4-211ENST00000561992 USH2AO75445 5202 aa3.58□□□□□ -1.84
TCF4-211ENST00000561992 KRTAP2-3P0C7H8 128 aa3.55□□□□□ -1.84
TCF4-211ENST00000561992 KRTAP2-4Q9BYR9 128 aa3.55□□□□□ -1.84
TCF4-211ENST00000561992 KRTAP2-1Q9BYU5 128 aa3.55□□□□□ -1.84
TCF4-211ENST00000561992 SYNE2Q8WXH0 6885 aaKnown RBP3.55□□□□□ -1.84
TCF4-211ENST00000561992 MACF1Q9UPN3 7388 aaKnown RBP3.52□□□□□ -1.85
TCF4-211ENST00000561992 MT3P25713 68 aa3.49□□□□□ -1.85
TCF4-211ENST00000561992 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
TCF4-211ENST00000561992 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
TCF4-211ENST00000561992 KRTAP19-7Q3SYF9 63 aa3.42□□□□□ -1.86
TCF4-211ENST00000561992 KRTAP4-8Q9BYQ9 185 aa3.39□□□□□ -1.87
TCF4-211ENST00000561992 KRTAP6-3Q3LI67 103 aa3.38□□□□□ -1.87
TCF4-211ENST00000561992 KRTAP4-8A0A0G2JLE6 195 aa3.36□□□□□ -1.87
TCF4-211ENST00000561992 MT1LQ93083 61 aa3.36□□□□□ -1.87
TCF4-211ENST00000561992 NEBP20929 6669 aa3.36□□□□□ -1.87
TCF4-211ENST00000561992 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
TCF4-211ENST00000561992 KRTAP20-1Q3LI63 56 aa3.34□□□□□ -1.88
TCF4-211ENST00000561992 MT1EP04732 61 aa3.33□□□□□ -1.88
TCF4-211ENST00000561992 KRTAP19-6Q3LI70 58 aa3.31□□□□□ -1.88
TCF4-211ENST00000561992 LCE3BQ5TA77 95 aa3.3□□□□□ -1.88
TCF4-211ENST00000561992 KRTAP4-7Q9BYR0 210 aa3.28□□□□□ -1.88
TCF4-211ENST00000561992 MUC12Q9UKN1 5478 aa3.28□□□□□ -1.88
TCF4-211ENST00000561992 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
TCF4-211ENST00000561992 LCE1DQ5T752 114 aa3.21□□□□□ -1.9
TCF4-211ENST00000561992 MDN1Q9NU22 5596 aa3.14□□□□□ -1.91
TCF4-211ENST00000561992 KMT2DO14686 5537 aa3.13□□□□□ -1.91
TCF4-211ENST00000561992 MT1GP13640 62 aa3.12□□□□□ -1.91
TCF4-211ENST00000561992 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
TCF4-211ENST00000561992 MT1MQ8N339 61 aa3.1□□□□□ -1.91
TCF4-211ENST00000561992 KRTAP19-3Q7Z4W3 81 aa3.08□□□□□ -1.92
TCF4-211ENST00000561992 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
TCF4-211ENST00000561992 KRTAP5-9P26371 169 aa3.07□□□□□ -1.92
TCF4-211ENST00000561992 GPR98Q8WXG9 6306 aa3.04□□□□□ -1.92
TCF4-211ENST00000561992 MT1AP04731 61 aa3.02□□□□□ -1.93
TCF4-211ENST00000561992 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
TCF4-211ENST00000561992 SPRR2EP22531 72 aa2.99□□□□□ -1.93
TCF4-211ENST00000561992 SPRR2BP35325 72 aa2.99□□□□□ -1.93
TCF4-211ENST00000561992 SPRR2AP35326 72 aa2.99□□□□□ -1.93
TCF4-211ENST00000561992 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
TCF4-211ENST00000561992 KRTAP4-9Q9BYQ8 210 aa2.95□□□□□ -1.94
TCF4-211ENST00000561992 SPRR2FQ96RM1 72 aa2.94□□□□□ -1.94
TCF4-211ENST00000561992 SPRR2DP22532 72 aa2.89□□□□□ -1.95
TCF4-211ENST00000561992 KRTAP4-11Q9BYQ6 195 aa2.89□□□□□ -1.95
TCF4-211ENST00000561992 KRTAP6-1Q3LI64 71 aa2.8□□□□□ -1.96
TCF4-211ENST00000561992 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
TCF4-211ENST00000561992 PRM1P04553 51 aa2.76□□□□□ -1.97
TCF4-211ENST00000561992 DSTQ03001 7570 aaKnown RBP2.76□□□□□ -1.97
TCF4-211ENST00000561992 SYNE1Q8NF91 8797 aaKnown RBP2.68□□□□□ -1.98
TCF4-211ENST00000561992 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
TCF4-211ENST00000561992 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
TCF4-211ENST00000561992 KRTAP6-2Q3LI66 62 aa2.63□□□□□ -1.99
TCF4-211ENST00000561992 KRTAP5-10Q6L8G5 202 aa2.6□□□□□ -1.99
TCF4-211ENST00000561992 MT4P47944 62 aa2.57□□□□□ -2
TCF4-211ENST00000561992 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
TCF4-211ENST00000561992 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
TCF4-211ENST00000561992 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
TCF4-211ENST00000561992 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
TCF4-211ENST00000561992 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
TCF4-211ENST00000561992 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
TCF4-211ENST00000561992 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
TCF4-211ENST00000561992 OBSCNQ5VST9 7968 aa2.24□□□□□ -2.05
TCF4-211ENST00000561992 KRTAP5-2Q701N4 177 aa2.22□□□□□ -2.05
TCF4-211ENST00000561992 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
TCF4-211ENST00000561992 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
TCF4-211ENST00000561992 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
TCF4-211ENST00000561992 KRTAP5-1Q6L8H4 278 aa2.06□□□□□ -2.08
TCF4-211ENST00000561992 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
TCF4-211ENST00000561992 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
TCF4-211ENST00000561992 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
TCF4-211ENST00000561992 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
TCF4-211ENST00000561992 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
TCF4-211ENST00000561992 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
TCF4-211ENST00000561992 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 102.7 ms