RNA–Protein interactions for RNA: ENST00000560899.5

ETFA-218, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 5

Gene ETFA, Length 910 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-218ENST00000560899 LCE5AQ5TCM9 118 aa6.36□□□□□ -1.39
ETFA-218ENST00000560899 KRTAP19-3Q7Z4W3 81 aa6.35□□□□□ -1.39
ETFA-218ENST00000560899 LCE3BQ5TA77 95 aa6.34□□□□□ -1.39
ETFA-218ENST00000560899 KRTAP19-5Q3LI72 72 aa6.32□□□□□ -1.4
ETFA-218ENST00000560899 CDC42SE1Q9NRR8 79 aa6.27□□□□□ -1.41
ETFA-218ENST00000560899 LCE3AQ5TA76 89 aa6.26□□□□□ -1.41
ETFA-218ENST00000560899 KRTAP25-1Q3LHN0 102 aa6.25□□□□□ -1.41
ETFA-218ENST00000560899 MT1GP13640 62 aa6.22□□□□□ -1.41
ETFA-218ENST00000560899 PP632Q6XCG6 107 aa6.18□□□□□ -1.42
ETFA-218ENST00000560899 MT1LQ93083 61 aa6.16□□□□□ -1.42
ETFA-218ENST00000560899 DSTQ03001 7570 aaKnown RBP6.11□□□□□ -1.43
ETFA-218ENST00000560899 MT1MQ8N339 61 aa6.1□□□□□ -1.43
ETFA-218ENST00000560899 ROMO1P60602 79 aa6.08□□□□□ -1.44
ETFA-218ENST00000560899 KRTAP23-1A1A580 65 aa6.07□□□□□ -1.44
ETFA-218ENST00000560899 KRTAP12-3P60328 96 aa6.05□□□□□ -1.44
ETFA-218ENST00000560899 KRTAP4-12Q9BQ66 201 aa6.02□□□□□ -1.45
ETFA-218ENST00000560899 KRTAP9-9Q9BYP9 154 aa5.96□□□□□ -1.46
ETFA-218ENST00000560899 KRTAP9-4Q9BYQ2 154 aa5.96□□□□□ -1.46
ETFA-218ENST00000560899 BRK1Q8WUW1 75 aa5.92□□□□□ -1.46
ETFA-218ENST00000560899 KRTAP4-3Q9BYR4 195 aa5.88□□□□□ -1.47
ETFA-218ENST00000560899 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
ETFA-218ENST00000560899 LCE4AQ5TA78 99 aa5.83□□□□□ -1.48
ETFA-218ENST00000560899 KRTAP4-9Q9BYQ8 210 aa5.8□□□□□ -1.48
ETFA-218ENST00000560899 KRTAP4-7Q9BYR0 210 aa5.79□□□□□ -1.48
ETFA-218ENST00000560899 KRTAP5-4Q6L8H1 288 aa5.77□□□□□ -1.49
ETFA-218ENST00000560899 KRTAP15-1Q3LI76 137 aa5.76□□□□□ -1.49
ETFA-218ENST00000560899 LCE1DQ5T752 114 aa5.75□□□□□ -1.49
ETFA-218ENST00000560899 MT4P47944 62 aa5.65□□□□□ -1.5
ETFA-218ENST00000560899 KRTAP5-5Q701N2 237 aaPredicted RBP5.62□□□□□ -1.51
ETFA-218ENST00000560899 HMCN1Q96RW7 5635 aa5.62□□□□□ -1.51
ETFA-218ENST00000560899 PMAIP1Q13794 54 aa5.6□□□□□ -1.51
ETFA-218ENST00000560899 LCE3CQ5T5A8 94 aa5.6□□□□□ -1.51
ETFA-218ENST00000560899 PRO0628Q9UI54 55 aa5.48□□□□□ -1.53
ETFA-218ENST00000560899 KRTAP4-2Q9BYR5 136 aa5.47□□□□□ -1.53
ETFA-218ENST00000560899 GPR98Q8WXG9 6306 aa5.46□□□□□ -1.53
ETFA-218ENST00000560899 SPRR5A0A1B0GTR4 108 aa5.44□□□□□ -1.54
ETFA-218ENST00000560899 KRTAP12-4P60329 112 aa5.41□□□□□ -1.54
ETFA-218ENST00000560899 KRTAP20-2Q3LI61 65 aa5.4□□□□□ -1.54
ETFA-218ENST00000560899 AHNAK2Q8IVF2 5795 aa5.33□□□□□ -1.56
ETFA-218ENST00000560899 KRTAP4-11Q9BYQ6 195 aa5.3□□□□□ -1.56
ETFA-218ENST00000560899 KRTAP5-10Q6L8G5 202 aa5.29□□□□□ -1.56
ETFA-218ENST00000560899 PRAC1Q96KF2 57 aa5.27□□□□□ -1.57
ETFA-218ENST00000560899 MT1AP04731 61 aa5.26□□□□□ -1.57
ETFA-218ENST00000560899 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
ETFA-218ENST00000560899 KRTAP5-3Q6L8H2 238 aa5.25□□□□□ -1.57
ETFA-218ENST00000560899 SYNE1Q8NF91 8797 aaKnown RBP5.22□□□□□ -1.57
ETFA-218ENST00000560899 KRTAP6-1Q3LI64 71 aa5.18□□□□□ -1.58
ETFA-218ENST00000560899 KTN1-AS1Q86SY8 53 aa5.16□□□□□ -1.58
ETFA-218ENST00000560899 KRTAP5-2Q701N4 177 aa5.09□□□□□ -1.59
ETFA-218ENST00000560899 KRTAP5-7Q6L8G8 165 aa5.08□□□□□ -1.6
ETFA-218ENST00000560899 KRTAP6-2Q3LI66 62 aa4.92□□□□□ -1.62
ETFA-218ENST00000560899 SVIPQ8NHG7 77 aa4.88□□□□□ -1.63
ETFA-218ENST00000560899 MT3P25713 68 aa4.8□□□□□ -1.64
ETFA-218ENST00000560899 KRTAP5-8O75690 187 aa4.73□□□□□ -1.65
ETFA-218ENST00000560899 OBSCNQ5VST9 7968 aa4.65□□□□□ -1.67
ETFA-218ENST00000560899 KRTAP5-1Q6L8H4 278 aa4.52□□□□□ -1.69
ETFA-218ENST00000560899 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
ETFA-218ENST00000560899 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
ETFA-218ENST00000560899 MUC5ACP98088 5654 aa4.35□□□□□ -1.71
ETFA-218ENST00000560899 MUC5BQ9HC84 5762 aaPredicted RBP4.35□□□□□ -1.71
ETFA-218ENST00000560899 AHNAKQ09666 5890 aaKnown RBP4.28□□□□□ -1.72
ETFA-218ENST00000560899 A0A0A0MQY5 61 aa4.28□□□□□ -1.72
ETFA-218ENST00000560899 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
ETFA-218ENST00000560899 LCE1CQ5T751 118 aa4.09□□□□□ -1.75
ETFA-218ENST00000560899 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
ETFA-218ENST00000560899 LCE3EQ5T5B0 92 aa3.92□□□□□ -1.78
ETFA-218ENST00000560899 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
ETFA-218ENST00000560899 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
ETFA-218ENST00000560899 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
ETFA-218ENST00000560899 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
ETFA-218ENST00000560899 KRTAP21-2Q3LI59 83 aa3.43□□□□□ -1.86
ETFA-218ENST00000560899 INE1O15225 51 aa3.21□□□□□ -1.9
ETFA-218ENST00000560899 PHGR1C9JFL3 82 aa3.18□□□□□ -1.9
ETFA-218ENST00000560899 PRM1P04553 51 aa3.1□□□□□ -1.91
ETFA-218ENST00000560899 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
ETFA-218ENST00000560899 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.96
ETFA-218ENST00000560899 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
ETFA-218ENST00000560899 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 73.7 ms