RNA–Protein interactions for RNA: ENST00000560785.1

PCSK6-212, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 4

Gene PCSK6, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-212ENST00000560785 SMIM26A0A096LP01 95 aa4.27□□□□□ -1.73
PCSK6-212ENST00000560785 SPANXA2-OT1Q8N9U9 137 aa4.27□□□□□ -1.73
PCSK6-212ENST00000560785 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
PCSK6-212ENST00000560785 ATP5EP56381 51 aaPredicted RBP4.25□□□□□ -1.73
PCSK6-212ENST00000560785 KRTAP12-1P59990 96 aa4.19□□□□□ -1.74
PCSK6-212ENST00000560785 PMAIP1Q13794 54 aa4.18□□□□□ -1.74
PCSK6-212ENST00000560785 KRTAP20-2Q3LI61 65 aa4.17□□□□□ -1.74
PCSK6-212ENST00000560785 C10orf95Q9H7T3 257 aa4.17□□□□□ -1.74
PCSK6-212ENST00000560785 SPINT4Q6UDR6 99 aa4.16□□□□□ -1.74
PCSK6-212ENST00000560785 SPRR5A0A1B0GTR4 108 aa4.15□□□□□ -1.75
PCSK6-212ENST00000560785 SPATA8Q6RVD6 105 aa4.15□□□□□ -1.75
PCSK6-212ENST00000560785 COA5Q86WW8 74 aa4.15□□□□□ -1.75
PCSK6-212ENST00000560785 LCE3AQ5TA76 89 aa4.14□□□□□ -1.75
PCSK6-212ENST00000560785 KRTAP5-5Q701N2 237 aaPredicted RBP4.12□□□□□ -1.75
PCSK6-212ENST00000560785 BRK1Q8WUW1 75 aa4.11□□□□□ -1.75
PCSK6-212ENST00000560785 A0A1B0GU33 70 aa4.1□□□□□ -1.75
PCSK6-212ENST00000560785 KRTAP4-7Q9BYR0 210 aa4.07□□□□□ -1.76
PCSK6-212ENST00000560785 TNP1P09430 55 aa4.06□□□□□ -1.76
PCSK6-212ENST00000560785 Q1T7F1 81 aa4.05□□□□□ -1.76
PCSK6-212ENST00000560785 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
PCSK6-212ENST00000560785 KRTAP12-3P60328 96 aa4□□□□□ -1.77
PCSK6-212ENST00000560785 KTN1-AS1Q86SY8 53 aa4□□□□□ -1.77
PCSK6-212ENST00000560785 LINC01558Q9Y6Z2 57 aa3.97□□□□□ -1.77
PCSK6-212ENST00000560785 A8MU10 97 aa3.93□□□□□ -1.78
PCSK6-212ENST00000560785 A0A1B0GU69 56 aa3.92□□□□□ -1.78
PCSK6-212ENST00000560785 PRR15LQ9BU68 103 aa3.92□□□□□ -1.78
PCSK6-212ENST00000560785 PSPHP1O15172 72 aa3.9□□□□□ -1.79
PCSK6-212ENST00000560785 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.79
PCSK6-212ENST00000560785 KRTAP4-11Q9BYQ6 195 aa3.88□□□□□ -1.79
PCSK6-212ENST00000560785 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
PCSK6-212ENST00000560785 KRTAP19-4Q3LI73 84 aa3.86□□□□□ -1.79
PCSK6-212ENST00000560785 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
PCSK6-212ENST00000560785 H3BS24 57 aa3.83□□□□□ -1.8
PCSK6-212ENST00000560785 CDC42SE1Q9NRR8 79 aa3.82□□□□□ -1.8
PCSK6-212ENST00000560785 A6NED7 52 aa3.79□□□□□ -1.8
PCSK6-212ENST00000560785 UQCR11O14957 56 aa3.79□□□□□ -1.8
PCSK6-212ENST00000560785 MUC5ACP98088 5654 aa3.78□□□□□ -1.8
PCSK6-212ENST00000560785 KRTAP5-8O75690 187 aa3.78□□□□□ -1.8
PCSK6-212ENST00000560785 AHNAKQ09666 5890 aaKnown RBP3.78□□□□□ -1.8
PCSK6-212ENST00000560785 MIR22HGQ0VDD5 57 aa3.74□□□□□ -1.81
PCSK6-212ENST00000560785 MUC5BQ9HC84 5762 aaPredicted RBP3.73□□□□□ -1.81
PCSK6-212ENST00000560785 MT1AP04731 61 aa3.71□□□□□ -1.82
PCSK6-212ENST00000560785 KRTAP25-1Q3LHN0 102 aa3.71□□□□□ -1.82
PCSK6-212ENST00000560785 KRTAP6-1Q3LI64 71 aa3.68□□□□□ -1.82
PCSK6-212ENST00000560785 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
PCSK6-212ENST00000560785 KRTAP15-1Q3LI76 137 aa3.63□□□□□ -1.83
PCSK6-212ENST00000560785 KRTAP23-1A1A580 65 aa3.6□□□□□ -1.83
PCSK6-212ENST00000560785 KRTAP9-4Q9BYQ2 154 aa3.6□□□□□ -1.83
PCSK6-212ENST00000560785 K7ERS5 55 aa3.59□□□□□ -1.83
PCSK6-212ENST00000560785 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.83
PCSK6-212ENST00000560785 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
PCSK6-212ENST00000560785 PRAC1Q96KF2 57 aa3.57□□□□□ -1.84
PCSK6-212ENST00000560785 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
PCSK6-212ENST00000560785 ROMO1P60602 79 aa3.49□□□□□ -1.85
PCSK6-212ENST00000560785 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
PCSK6-212ENST00000560785 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
PCSK6-212ENST00000560785 A0A0A0MQY5 61 aa3.44□□□□□ -1.86
PCSK6-212ENST00000560785 MT3P25713 68 aa3.39□□□□□ -1.87
PCSK6-212ENST00000560785 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
PCSK6-212ENST00000560785 NDUFAF8A1L188 74 aa3.17□□□□□ -1.9
PCSK6-212ENST00000560785 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
PCSK6-212ENST00000560785 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
PCSK6-212ENST00000560785 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
PCSK6-212ENST00000560785 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
PCSK6-212ENST00000560785 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
PCSK6-212ENST00000560785 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
PCSK6-212ENST00000560785 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
PCSK6-212ENST00000560785 INE1O15225 51 aa2.75□□□□□ -1.97
PCSK6-212ENST00000560785 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
PCSK6-212ENST00000560785 PHGR1C9JFL3 82 aa2.57□□□□□ -2
PCSK6-212ENST00000560785 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
PCSK6-212ENST00000560785 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
PCSK6-212ENST00000560785 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
PCSK6-212ENST00000560785 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
PCSK6-212ENST00000560785 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
PCSK6-212ENST00000560785 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
PCSK6-212ENST00000560785 PRM1P04553 51 aa1.79□□□□□ -2.12
PCSK6-212ENST00000560785 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms