RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 LCE3AQ5TA76 89 aa2.61□□□□□ -1.99
TSPAN3-209ENST00000560715 MT1HP80294 61 aa2.59□□□□□ -1.99
TSPAN3-209ENST00000560715 KRTAP4-11Q9BYQ6 195 aa2.59□□□□□ -1.99
TSPAN3-209ENST00000560715 M0R2T5 61 aa2.57□□□□□ -2
TSPAN3-209ENST00000560715 KRTAP8-1Q8IUC2 63 aa2.56□□□□□ -2
TSPAN3-209ENST00000560715 SPRR2GQ9BYE4 73 aa2.55□□□□□ -2
TSPAN3-209ENST00000560715 CRCT1Q9UGL9 99 aa2.54□□□□□ -2
TSPAN3-209ENST00000560715 KRTAP10-5P60370 271 aa2.53□□□□□ -2
TSPAN3-209ENST00000560715 MT2AP02795 61 aa2.51□□□□□ -2.01
TSPAN3-209ENST00000560715 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
TSPAN3-209ENST00000560715 MT1FP04733 61 aa2.5□□□□□ -2.01
TSPAN3-209ENST00000560715 FSIP2Q5CZC0 6907 aa2.49□□□□□ -2.01
TSPAN3-209ENST00000560715 KRTAP12-3P60328 96 aa2.47□□□□□ -2.01
TSPAN3-209ENST00000560715 KRTAP19-8Q3LI54 63 aa2.46□□□□□ -2.02
TSPAN3-209ENST00000560715 KRTAP12-4P60329 112 aa2.45□□□□□ -2.02
TSPAN3-209ENST00000560715 MT1BP07438 61 aa2.4□□□□□ -2.02
TSPAN3-209ENST00000560715 KRTAP2-3P0C7H8 128 aa2.39□□□□□ -2.03
TSPAN3-209ENST00000560715 KRTAP2-4Q9BYR9 128 aa2.39□□□□□ -2.03
TSPAN3-209ENST00000560715 KRTAP2-1Q9BYU5 128 aa2.39□□□□□ -2.03
TSPAN3-209ENST00000560715 MT1XP80297 61 aa2.36□□□□□ -2.03
TSPAN3-209ENST00000560715 SSPOA2VEC9 5147 aa2.34□□□□□ -2.03
TSPAN3-209ENST00000560715 USH2AO75445 5202 aa2.34□□□□□ -2.04
TSPAN3-209ENST00000560715 FCGBPQ9Y6R7 5405 aaPredicted RBP2.31□□□□□ -2.04
TSPAN3-209ENST00000560715 KRTAP9-6A8MVA2 160 aa2.3□□□□□ -2.04
TSPAN3-209ENST00000560715 HMCN1Q96RW7 5635 aa2.29□□□□□ -2.04
TSPAN3-209ENST00000560715 MACF1Q9UPN3 7388 aaKnown RBP2.25□□□□□ -2.05
TSPAN3-209ENST00000560715 KRTAP19-5Q3LI72 72 aa2.23□□□□□ -2.05
TSPAN3-209ENST00000560715 SYNE2Q8WXH0 6885 aaKnown RBP2.23□□□□□ -2.05
TSPAN3-209ENST00000560715 KRTAP19-6Q3LI70 58 aa2.23□□□□□ -2.05
TSPAN3-209ENST00000560715 NEBP20929 6669 aa2.15□□□□□ -2.07
TSPAN3-209ENST00000560715 KMT2DO14686 5537 aa2.13□□□□□ -2.07
TSPAN3-209ENST00000560715 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
TSPAN3-209ENST00000560715 KRTAP19-7Q3SYF9 63 aa2.11□□□□□ -2.07
TSPAN3-209ENST00000560715 MUC12Q9UKN1 5478 aa2.08□□□□□ -2.08
TSPAN3-209ENST00000560715 KRTAP20-1Q3LI63 56 aa2.08□□□□□ -2.08
TSPAN3-209ENST00000560715 MT1EP04732 61 aa2.06□□□□□ -2.08
TSPAN3-209ENST00000560715 KRTAP5-9P26371 169 aa2.04□□□□□ -2.08
TSPAN3-209ENST00000560715 MT1LQ93083 61 aa2.04□□□□□ -2.08
TSPAN3-209ENST00000560715 MDN1Q9NU22 5596 aa2.01□□□□□ -2.09
TSPAN3-209ENST00000560715 PRM1P04553 51 aa1.98□□□□□ -2.09
TSPAN3-209ENST00000560715 MT1GP13640 62 aa1.96□□□□□ -2.1
TSPAN3-209ENST00000560715 KRTAP19-3Q7Z4W3 81 aa1.96□□□□□ -2.1
TSPAN3-209ENST00000560715 SPRR2EP22531 72 aa1.95□□□□□ -2.1
TSPAN3-209ENST00000560715 SPRR2BP35325 72 aa1.95□□□□□ -2.1
TSPAN3-209ENST00000560715 SPRR2AP35326 72 aa1.95□□□□□ -2.1
TSPAN3-209ENST00000560715 SPRR2FQ96RM1 72 aa1.94□□□□□ -2.1
TSPAN3-209ENST00000560715 KRTAP5-5Q701N2 237 aaPredicted RBP1.93□□□□□ -2.1
TSPAN3-209ENST00000560715 MT1MQ8N339 61 aa1.93□□□□□ -2.1
TSPAN3-209ENST00000560715 MT1AP04731 61 aa1.91□□□□□ -2.1
TSPAN3-209ENST00000560715 GPR98Q8WXG9 6306 aa1.91□□□□□ -2.1
TSPAN3-209ENST00000560715 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.89□□□□□ -2.11
TSPAN3-209ENST00000560715 KRTAP4-3Q9BYR4 195 aa1.89□□□□□ -2.11
TSPAN3-209ENST00000560715 SPRR2DP22532 72 aa1.88□□□□□ -2.11
TSPAN3-209ENST00000560715 SYNE1Q8NF91 8797 aaKnown RBP1.87□□□□□ -2.11
TSPAN3-209ENST00000560715 LCE1CQ5T751 118 aa1.86□□□□□ -2.11
TSPAN3-209ENST00000560715 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
TSPAN3-209ENST00000560715 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.11
TSPAN3-209ENST00000560715 MUC5BQ9HC84 5762 aaPredicted RBP1.84□□□□□ -2.12
TSPAN3-209ENST00000560715 OBSCNQ5VST9 7968 aa1.83□□□□□ -2.12
TSPAN3-209ENST00000560715 KRTAP5-7Q6L8G8 165 aa1.82□□□□□ -2.12
TSPAN3-209ENST00000560715 KRTAP6-2Q3LI66 62 aa1.8□□□□□ -2.12
TSPAN3-209ENST00000560715 DSTQ03001 7570 aaKnown RBP1.77□□□□□ -2.13
TSPAN3-209ENST00000560715 KRTAP6-1Q3LI64 71 aa1.71□□□□□ -2.14
TSPAN3-209ENST00000560715 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
TSPAN3-209ENST00000560715 AHNAK2Q8IVF2 5795 aa1.68□□□□□ -2.14
TSPAN3-209ENST00000560715 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
TSPAN3-209ENST00000560715 KRTAP5-1Q6L8H4 278 aa1.65□□□□□ -2.14
TSPAN3-209ENST00000560715 MT4P47944 62 aa1.65□□□□□ -2.15
TSPAN3-209ENST00000560715 KRTAP5-4Q6L8H1 288 aa1.62□□□□□ -2.15
TSPAN3-209ENST00000560715 KRTAP20-2Q3LI61 65 aa1.53□□□□□ -2.16
TSPAN3-209ENST00000560715 KRTAP4-4Q9BYR3 166 aa1.5□□□□□ -2.17
TSPAN3-209ENST00000560715 KRTAP5-2Q701N4 177 aa1.47□□□□□ -2.17
TSPAN3-209ENST00000560715 KRTAP5-8O75690 187 aa1.38□□□□□ -2.19
TSPAN3-209ENST00000560715 MUC5ACP98088 5654 aa1.38□□□□□ -2.19
TSPAN3-209ENST00000560715 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
TSPAN3-209ENST00000560715 KRTAP21-2Q3LI59 83 aa1.13□□□□□ -2.23
TSPAN3-209ENST00000560715 PHGR1C9JFL3 82 aa0.95□□□□□ -2.26
TSPAN3-209ENST00000560715 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 70.9 ms