RNA–Protein interactions for RNA: ENST00000560563.1

ACTC1-203, Transcript of actin, alpha, cardiac muscle 1, humanhuman

TSL 2

Gene ACTC1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-203ENST00000560563 KRTAP12-1P59990 96 aa3.52□□□□□ -1.85
ACTC1-203ENST00000560563 KRTAP12-2P59991 146 aa3.5□□□□□ -1.85
ACTC1-203ENST00000560563 SPINT4Q6UDR6 99 aa3.5□□□□□ -1.85
ACTC1-203ENST00000560563 PMAIP1Q13794 54 aa3.49□□□□□ -1.85
ACTC1-203ENST00000560563 SSPOA2VEC9 5147 aa3.47□□□□□ -1.85
ACTC1-203ENST00000560563 MT1XP80297 61 aa3.47□□□□□ -1.85
ACTC1-203ENST00000560563 SVIPQ8NHG7 77 aa3.47□□□□□ -1.85
ACTC1-203ENST00000560563 CAMK2N1Q7Z7J9 78 aa3.45□□□□□ -1.86
ACTC1-203ENST00000560563 PRO2289Q9P1D8 64 aa3.45□□□□□ -1.86
ACTC1-203ENST00000560563 KTN1-AS1Q86SY8 53 aa3.39□□□□□ -1.87
ACTC1-203ENST00000560563 FCGBPQ9Y6R7 5405 aaPredicted RBP3.35□□□□□ -1.87
ACTC1-203ENST00000560563 C10orf95Q9H7T3 257 aa3.34□□□□□ -1.87
ACTC1-203ENST00000560563 ROMO1P60602 79 aa3.28□□□□□ -1.88
ACTC1-203ENST00000560563 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
ACTC1-203ENST00000560563 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
ACTC1-203ENST00000560563 TNP1P09430 55 aa3.27□□□□□ -1.89
ACTC1-203ENST00000560563 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
ACTC1-203ENST00000560563 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
ACTC1-203ENST00000560563 KRTAP25-1Q3LHN0 102 aa3.22□□□□□ -1.89
ACTC1-203ENST00000560563 LCE3AQ5TA76 89 aa3.2□□□□□ -1.9
ACTC1-203ENST00000560563 KRTAP8-1Q8IUC2 63 aa3.19□□□□□ -1.9
ACTC1-203ENST00000560563 MACF1Q9UPN3 7388 aaKnown RBP3.17□□□□□ -1.9
ACTC1-203ENST00000560563 KRTAP6-3Q3LI67 103 aa3.16□□□□□ -1.9
ACTC1-203ENST00000560563 PRAC1Q96KF2 57 aa3.15□□□□□ -1.91
ACTC1-203ENST00000560563 KMT2DO14686 5537 aa3.14□□□□□ -1.91
ACTC1-203ENST00000560563 PP632Q6XCG6 107 aa3.11□□□□□ -1.91
ACTC1-203ENST00000560563 SPRR2FQ96RM1 72 aa3.11□□□□□ -1.91
ACTC1-203ENST00000560563 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
ACTC1-203ENST00000560563 KRTAP19-5Q3LI72 72 aa3.09□□□□□ -1.91
ACTC1-203ENST00000560563 SYNE2Q8WXH0 6885 aaKnown RBP3.09□□□□□ -1.92
ACTC1-203ENST00000560563 MT1EP04732 61 aa3.05□□□□□ -1.92
ACTC1-203ENST00000560563 KRTAP12-3P60328 96 aa3.04□□□□□ -1.92
ACTC1-203ENST00000560563 SPRR2EP22531 72 aa2.99□□□□□ -1.93
ACTC1-203ENST00000560563 SPRR2BP35325 72 aa2.99□□□□□ -1.93
ACTC1-203ENST00000560563 SPRR2AP35326 72 aa2.99□□□□□ -1.93
ACTC1-203ENST00000560563 KRTAP19-3Q7Z4W3 81 aa2.97□□□□□ -1.93
ACTC1-203ENST00000560563 KRTAP5-2Q701N4 177 aa2.96□□□□□ -1.94
ACTC1-203ENST00000560563 MT1LQ93083 61 aa2.96□□□□□ -1.94
ACTC1-203ENST00000560563 MUC12Q9UKN1 5478 aa2.96□□□□□ -1.94
ACTC1-203ENST00000560563 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
ACTC1-203ENST00000560563 MT1GP13640 62 aa2.93□□□□□ -1.94
ACTC1-203ENST00000560563 NEBP20929 6669 aa2.92□□□□□ -1.94
ACTC1-203ENST00000560563 MDN1Q9NU22 5596 aa2.89□□□□□ -1.95
ACTC1-203ENST00000560563 SPRR2DP22532 72 aa2.89□□□□□ -1.95
ACTC1-203ENST00000560563 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
ACTC1-203ENST00000560563 MT1MQ8N339 61 aa2.88□□□□□ -1.95
ACTC1-203ENST00000560563 KRTAP2-3P0C7H8 128 aa2.79□□□□□ -1.96
ACTC1-203ENST00000560563 KRTAP2-4Q9BYR9 128 aa2.79□□□□□ -1.96
ACTC1-203ENST00000560563 LUZP6Q538Z0 58 aa2.78□□□□□ -1.96
ACTC1-203ENST00000560563 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
ACTC1-203ENST00000560563 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
ACTC1-203ENST00000560563 KRTAP2-1Q9BYU5 128 aa2.73□□□□□ -1.97
ACTC1-203ENST00000560563 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
ACTC1-203ENST00000560563 SPRR5A0A1B0GTR4 108 aa2.66□□□□□ -1.98
ACTC1-203ENST00000560563 DSTQ03001 7570 aaKnown RBP2.66□□□□□ -1.98
ACTC1-203ENST00000560563 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
ACTC1-203ENST00000560563 MT1AP04731 61 aa2.53□□□□□ -2
ACTC1-203ENST00000560563 MT4P47944 62 aa2.5□□□□□ -2.01
ACTC1-203ENST00000560563 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
ACTC1-203ENST00000560563 KRTAP12-4P60329 112 aa2.47□□□□□ -2.01
ACTC1-203ENST00000560563 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
ACTC1-203ENST00000560563 SYNE1Q8NF91 8797 aaKnown RBP2.46□□□□□ -2.02
ACTC1-203ENST00000560563 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
ACTC1-203ENST00000560563 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
ACTC1-203ENST00000560563 KRTAP6-2Q3LI66 62 aa2.32□□□□□ -2.04
ACTC1-203ENST00000560563 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.04
ACTC1-203ENST00000560563 INE1O15225 51 aa2.27□□□□□ -2.05
ACTC1-203ENST00000560563 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
ACTC1-203ENST00000560563 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
ACTC1-203ENST00000560563 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
ACTC1-203ENST00000560563 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
ACTC1-203ENST00000560563 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
ACTC1-203ENST00000560563 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
ACTC1-203ENST00000560563 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
ACTC1-203ENST00000560563 PRM1P04553 51 aa1.69□□□□□ -2.14
ACTC1-203ENST00000560563 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
ACTC1-203ENST00000560563 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
ACTC1-203ENST00000560563 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 275.9 ms