RNA–Protein interactions for RNA: ENST00000560471.5

SHF-206, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-206ENST00000560471 FCGBPQ9Y6R7 5405 aaPredicted RBP8.68□□□□□ -1.02
SHF-206ENST00000560471 MUC12Q9UKN1 5478 aa8.64□□□□□ -1.03
SHF-206ENST00000560471 KRTAP4-3Q9BYR4 195 aa8.61□□□□□ -1.03
SHF-206ENST00000560471 LCE2DQ5TA82 110 aaPredicted RBP8.58□□□□□ -1.04
SHF-206ENST00000560471 LOC100996750A0A140TA64 210 aa8.56□□□□□ -1.04
SHF-206ENST00000560471 MT1GP13640 62 aa8.46□□□□□ -1.05
SHF-206ENST00000560471 MT1MQ8N339 61 aa8.44□□□□□ -1.06
SHF-206ENST00000560471 KRTAP19-3Q7Z4W3 81 aa8.43□□□□□ -1.06
SHF-206ENST00000560471 MACF1Q9UPN3 7388 aaKnown RBP8.35□□□□□ -1.07
SHF-206ENST00000560471 DSTQ03001 7570 aaKnown RBP8.34□□□□□ -1.07
SHF-206ENST00000560471 CRCT1Q9UGL9 99 aa8.29□□□□□ -1.08
SHF-206ENST00000560471 SYNE2Q8WXH0 6885 aaKnown RBP8.2□□□□□ -1.1
SHF-206ENST00000560471 SPRR2FQ96RM1 72 aa8.15□□□□□ -1.1
SHF-206ENST00000560471 LCE5AQ5TCM9 118 aa8.14□□□□□ -1.11
SHF-206ENST00000560471 MDN1Q9NU22 5596 aa8□□□□□ -1.13
SHF-206ENST00000560471 KRTAP9-2Q9BYQ4 174 aa7.95□□□□□ -1.14
SHF-206ENST00000560471 KRTAP12-4P60329 112 aa7.84□□□□□ -1.15
SHF-206ENST00000560471 LCE3BQ5TA77 95 aa7.82□□□□□ -1.16
SHF-206ENST00000560471 KRTAP4-9Q9BYQ8 210 aa7.69□□□□□ -1.18
SHF-206ENST00000560471 KRTAP6-1Q3LI64 71 aa7.68□□□□□ -1.18
SHF-206ENST00000560471 LCE1AQ5T7P2 110 aa7.59□□□□□ -1.19
SHF-206ENST00000560471 SYNE1Q8NF91 8797 aaKnown RBP7.58□□□□□ -1.2
SHF-206ENST00000560471 MT1AP04731 61 aa7.56□□□□□ -1.2
SHF-206ENST00000560471 KRTAP5-9P26371 169 aa7.52□□□□□ -1.21
SHF-206ENST00000560471 KRTAP5-5Q701N2 237 aaPredicted RBP7.45□□□□□ -1.22
SHF-206ENST00000560471 SPRR2EP22531 72 aa7.41□□□□□ -1.22
SHF-206ENST00000560471 SPRR2BP35325 72 aa7.41□□□□□ -1.22
SHF-206ENST00000560471 SPRR2AP35326 72 aa7.41□□□□□ -1.22
SHF-206ENST00000560471 LCE3DQ9BYE3 92 aa7.34□□□□□ -1.24
SHF-206ENST00000560471 LCE3EQ5T5B0 92 aa7.23□□□□□ -1.25
SHF-206ENST00000560471 KRTAP9-4Q9BYQ2 154 aa7.12□□□□□ -1.27
SHF-206ENST00000560471 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.11□□□□□ -1.27
SHF-206ENST00000560471 OBSCNQ5VST9 7968 aa7.1□□□□□ -1.27
SHF-206ENST00000560471 SPRR2DP22532 72 aa7.08□□□□□ -1.28
SHF-206ENST00000560471 KRTAP9-7A8MTY7 169 aa7.07□□□□□ -1.28
SHF-206ENST00000560471 PRM1P04553 51 aa6.94□□□□□ -1.3
SHF-206ENST00000560471 KRTAP6-3Q3LI67 103 aa6.94□□□□□ -1.3
SHF-206ENST00000560471 KRTAP9-6A0A140TA67 174 aa6.92□□□□□ -1.3
SHF-206ENST00000560471 KRTAP6-2Q3LI66 62 aa6.89□□□□□ -1.31
SHF-206ENST00000560471 MT3P25713 68 aa6.78□□□□□ -1.32
SHF-206ENST00000560471 NEBP20929 6669 aa6.66□□□□□ -1.34
SHF-206ENST00000560471 KRTAP5-4Q6L8H1 288 aa6.53□□□□□ -1.36
SHF-206ENST00000560471 KRTAP2-2Q9BYT5 123 aa6.49□□□□□ -1.37
SHF-206ENST00000560471 MT4P47944 62 aa6.38□□□□□ -1.39
SHF-206ENST00000560471 KRTAP4-6Q9BYQ5 205 aa6.38□□□□□ -1.39
SHF-206ENST00000560471 HMCN1Q96RW7 5635 aa6.19□□□□□ -1.42
SHF-206ENST00000560471 KRTAP20-2Q3LI61 65 aa6.16□□□□□ -1.42
SHF-206ENST00000560471 KRTAP5-2Q701N4 177 aa6.11□□□□□ -1.43
SHF-206ENST00000560471 LCE4AQ5TA78 99 aa6.07□□□□□ -1.44
SHF-206ENST00000560471 LCE1DQ5T752 114 aa5.98□□□□□ -1.45
SHF-206ENST00000560471 LCE1EQ5T753 118 aa5.91□□□□□ -1.46
SHF-206ENST00000560471 KRTAP5-3Q6L8H2 238 aa5.85□□□□□ -1.47
SHF-206ENST00000560471 MUC5ACP98088 5654 aa5.77□□□□□ -1.49
SHF-206ENST00000560471 KRTAP20-1Q3LI63 56 aa5.76□□□□□ -1.49
SHF-206ENST00000560471 LCE1BQ5T7P3 118 aa5.52□□□□□ -1.53
SHF-206ENST00000560471 KRTAP5-10Q6L8G5 202 aa5.38□□□□□ -1.55
SHF-206ENST00000560471 KRTAP5-1Q6L8H4 278 aa5.31□□□□□ -1.56
SHF-206ENST00000560471 KRTAP4-2Q9BYR5 136 aa5.29□□□□□ -1.56
SHF-206ENST00000560471 KRTAP4-11Q9BYQ6 195 aa5.26□□□□□ -1.57
SHF-206ENST00000560471 LCE1CQ5T751 118 aa5.22□□□□□ -1.57
SHF-206ENST00000560471 LCE1FQ5T754 118 aa5.04□□□□□ -1.6
SHF-206ENST00000560471 AHNAK2Q8IVF2 5795 aa4.96□□□□□ -1.62
SHF-206ENST00000560471 KRTAP21-2Q3LI59 83 aa4.95□□□□□ -1.62
SHF-206ENST00000560471 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.93□□□□□ -1.62
SHF-206ENST00000560471 KRTAP5-8O75690 187 aa4.87□□□□□ -1.63
SHF-206ENST00000560471 KRTAP5-7Q6L8G8 165 aa4.75□□□□□ -1.65
SHF-206ENST00000560471 MUC5BQ9HC84 5762 aaPredicted RBP4.69□□□□□ -1.66
SHF-206ENST00000560471 KRTAP4-4Q9BYR3 166 aa4.57□□□□□ -1.68
SHF-206ENST00000560471 KRTAP5-11Q6L8G4 156 aa4.49□□□□□ -1.69
SHF-206ENST00000560471 KRTAP4-12Q9BQ66 201 aa4.4□□□□□ -1.7
SHF-206ENST00000560471 MUC19Q7Z5P9 8384 aa4.37□□□□□ -1.71
SHF-206ENST00000560471 KRTAP21-1Q3LI58 79 aa4.34□□□□□ -1.71
SHF-206ENST00000560471 GPR98Q8WXG9 6306 aa4.32□□□□□ -1.72
SHF-206ENST00000560471 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
SHF-206ENST00000560471 PHGR1C9JFL3 82 aa3.89□□□□□ -1.79
SHF-206ENST00000560471 AHNAKQ09666 5890 aaKnown RBP3.57□□□□□ -1.84
SHF-206ENST00000560471 MUC16Q8WXI7 14507 aa2.55□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 9.7 ms