RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 TMEM258P61165 79 aa2.39□□□□□ -2.03
HERC1-208ENST00000560462 UBL5Q9BZL1 73 aa2.39□□□□□ -2.03
HERC1-208ENST00000560462 S4R3F8 94 aa2.39□□□□□ -2.03
HERC1-208ENST00000560462 PLAC4Q8WY50 150 aa2.38□□□□□ -2.03
HERC1-208ENST00000560462 K7EP34 96 aa2.36□□□□□ -2.03
HERC1-208ENST00000560462 SYNE1Q8NF91 8797 aaKnown RBP2.36□□□□□ -2.03
HERC1-208ENST00000560462 CSAG1Q6PB30 78 aa2.35□□□□□ -2.03
HERC1-208ENST00000560462 PP632Q6XCG6 107 aa2.35□□□□□ -2.03
HERC1-208ENST00000560462 MT1EP04732 61 aa2.34□□□□□ -2.03
HERC1-208ENST00000560462 MT1GP13640 62 aa2.34□□□□□ -2.03
HERC1-208ENST00000560462 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.03
HERC1-208ENST00000560462 TP53AIP1Q9HCN2 124 aa2.34□□□□□ -2.03
HERC1-208ENST00000560462 KRTAP12-4P60329 112 aa2.33□□□□□ -2.04
HERC1-208ENST00000560462 TRAV22A0A0B4J277 110 aa2.32□□□□□ -2.04
HERC1-208ENST00000560462 UQCRQO14949 82 aa2.32□□□□□ -2.04
HERC1-208ENST00000560462 KRTAP19-7Q3SYF9 63 aa2.32□□□□□ -2.04
HERC1-208ENST00000560462 ETDBQ3ZM63 59 aa2.31□□□□□ -2.04
HERC1-208ENST00000560462 A0A087WVE0 104 aa2.3□□□□□ -2.04
HERC1-208ENST00000560462 LOC101927531A0A1B0GV80 90 aa2.3□□□□□ -2.04
HERC1-208ENST00000560462 CYP4F30PQ9H0H9 118 aa2.3□□□□□ -2.04
HERC1-208ENST00000560462 SERP1Q9Y6X1 66 aa2.3□□□□□ -2.04
HERC1-208ENST00000560462 F8W1H4 67 aa2.29□□□□□ -2.04
HERC1-208ENST00000560462 MT-ATP8P03928 68 aa2.29□□□□□ -2.04
HERC1-208ENST00000560462 MT1MQ8N339 61 aa2.29□□□□□ -2.04
HERC1-208ENST00000560462 OBSCNQ5VST9 7968 aa2.29□□□□□ -2.04
HERC1-208ENST00000560462 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
HERC1-208ENST00000560462 H0Y9P7 68 aa2.26□□□□□ -2.05
HERC1-208ENST00000560462 ATP5EP2Q5VTU8 51 aa2.26□□□□□ -2.05
HERC1-208ENST00000560462 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
HERC1-208ENST00000560462 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
HERC1-208ENST00000560462 ATOX1O00244 68 aa2.25□□□□□ -2.05
HERC1-208ENST00000560462 NDUFC1O43677 76 aa2.25□□□□□ -2.05
HERC1-208ENST00000560462 ACYP1P07311 99 aa2.25□□□□□ -2.05
HERC1-208ENST00000560462 COX7CP15954 63 aa2.23□□□□□ -2.05
HERC1-208ENST00000560462 Q1T7F1 81 aa2.23□□□□□ -2.05
HERC1-208ENST00000560462 ATP5EP56381 51 aaPredicted RBP2.21□□□□□ -2.06
HERC1-208ENST00000560462 ROMO1P60602 79 aa2.21□□□□□ -2.06
HERC1-208ENST00000560462 LINC00208Q96KT6 92 aa2.21□□□□□ -2.06
HERC1-208ENST00000560462 LINC00643Q86TS7 51 aa2.19□□□□□ -2.06
HERC1-208ENST00000560462 M0QZ58 72 aa2.17□□□□□ -2.06
HERC1-208ENST00000560462 C20orf197Q8N268 126 aa2.17□□□□□ -2.06
HERC1-208ENST00000560462 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
HERC1-208ENST00000560462 COA5Q86WW8 74 aa2.16□□□□□ -2.06
HERC1-208ENST00000560462 DMAC1Q96GE9 116 aa2.16□□□□□ -2.06
HERC1-208ENST00000560462 SERP2Q8N6R1 65 aa2.12□□□□□ -2.07
HERC1-208ENST00000560462 KRTAP13-4Q3LI77 160 aa2.11□□□□□ -2.07
HERC1-208ENST00000560462 MT1LQ93083 61 aa2.11□□□□□ -2.07
HERC1-208ENST00000560462 LCE3AQ5TA76 89 aa2.09□□□□□ -2.07
HERC1-208ENST00000560462 ACYP2P14621 99 aa2.07□□□□□ -2.08
HERC1-208ENST00000560462 KRTAP19-5Q3LI72 72 aa2.07□□□□□ -2.08
HERC1-208ENST00000560462 SPTSSBQ8NFR3 76 aa2.07□□□□□ -2.08
HERC1-208ENST00000560462 CHKB-CPT1BH3BT56 60 aa2.06□□□□□ -2.08
HERC1-208ENST00000560462 H7BZZ5 65 aa2.05□□□□□ -2.08
HERC1-208ENST00000560462 CDC42SE1Q9NRR8 79 aa2.05□□□□□ -2.08
HERC1-208ENST00000560462 MIR22HGQ0VDD5 57 aa2.04□□□□□ -2.08
HERC1-208ENST00000560462 SNURFQ9Y675 71 aa2.02□□□□□ -2.09
HERC1-208ENST00000560462 KRTAP12-1P59990 96 aa2□□□□□ -2.09
HERC1-208ENST00000560462 INE1O15225 51 aa1.98□□□□□ -2.09
HERC1-208ENST00000560462 A0A0D9SG42 100 aa1.94□□□□□ -2.1
HERC1-208ENST00000560462 SPATA8Q6RVD6 105 aa1.93□□□□□ -2.1
HERC1-208ENST00000560462 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
HERC1-208ENST00000560462 KRTAP6-2Q3LI66 62 aa1.9□□□□□ -2.11
HERC1-208ENST00000560462 C10orf95Q9H7T3 257 aa1.9□□□□□ -2.11
HERC1-208ENST00000560462 KRTAP12-3P60328 96 aa1.89□□□□□ -2.11
HERC1-208ENST00000560462 PRR15LQ9BU68 103 aa1.88□□□□□ -2.11
HERC1-208ENST00000560462 A0A1B0GU69 56 aa1.85□□□□□ -2.11
HERC1-208ENST00000560462 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
HERC1-208ENST00000560462 LCE1BQ5T7P3 118 aa1.83□□□□□ -2.12
HERC1-208ENST00000560462 TNP1P09430 55 aa1.82□□□□□ -2.12
HERC1-208ENST00000560462 KRTAP6-1Q3LI64 71 aa1.82□□□□□ -2.12
HERC1-208ENST00000560462 LINC01558Q9Y6Z2 57 aa1.82□□□□□ -2.12
HERC1-208ENST00000560462 UQCR11O14957 56 aa1.8□□□□□ -2.12
HERC1-208ENST00000560462 MT1AP04731 61 aa1.78□□□□□ -2.12
HERC1-208ENST00000560462 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
HERC1-208ENST00000560462 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
HERC1-208ENST00000560462 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
HERC1-208ENST00000560462 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
HERC1-208ENST00000560462 PRM1P04553 51 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 77.9 ms