RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
SMAD3-212ENST00000559937 KRTAP6-3Q3LI67 103 aa2.99□□□□□ -1.93
SMAD3-212ENST00000559937 LCE3CQ5T5A8 94 aa2.95□□□□□ -1.94
SMAD3-212ENST00000559937 KRTAP4-8A0A0G2JLE6 195 aa2.92□□□□□ -1.94
SMAD3-212ENST00000559937 KRTAP20-1Q3LI63 56 aa2.92□□□□□ -1.94
SMAD3-212ENST00000559937 KRTAP19-7Q3SYF9 63 aa2.92□□□□□ -1.94
SMAD3-212ENST00000559937 KRTAP4-8Q9BYQ9 185 aa2.92□□□□□ -1.94
SMAD3-212ENST00000559937 MUC12Q9UKN1 5478 aa2.89□□□□□ -1.95
SMAD3-212ENST00000559937 MT1EP04732 61 aa2.86□□□□□ -1.95
SMAD3-212ENST00000559937 MT1LQ93083 61 aa2.85□□□□□ -1.95
SMAD3-212ENST00000559937 KMT2DO14686 5537 aa2.85□□□□□ -1.95
SMAD3-212ENST00000559937 KRTAP5-9P26371 169 aa2.84□□□□□ -1.95
SMAD3-212ENST00000559937 INE1O15225 51 aa2.8□□□□□ -1.96
SMAD3-212ENST00000559937 MDN1Q9NU22 5596 aa2.77□□□□□ -1.97
SMAD3-212ENST00000559937 KRTAP9-6A8MVA2 160 aa2.77□□□□□ -1.97
SMAD3-212ENST00000559937 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
SMAD3-212ENST00000559937 KRTAP9-4Q9BYQ2 154 aa2.73□□□□□ -1.97
SMAD3-212ENST00000559937 KRTAP4-7Q9BYR0 210 aa2.73□□□□□ -1.97
SMAD3-212ENST00000559937 KRTAP2-3P0C7H8 128 aa2.72□□□□□ -1.97
SMAD3-212ENST00000559937 SPRR2FQ96RM1 72 aa2.72□□□□□ -1.97
SMAD3-212ENST00000559937 KRTAP2-4Q9BYR9 128 aa2.72□□□□□ -1.97
SMAD3-212ENST00000559937 KRTAP2-1Q9BYU5 128 aa2.72□□□□□ -1.97
SMAD3-212ENST00000559937 MT1GP13640 62 aa2.71□□□□□ -1.98
SMAD3-212ENST00000559937 KRTAP19-3Q7Z4W3 81 aa2.71□□□□□ -1.98
SMAD3-212ENST00000559937 LCE3BQ5TA77 95 aa2.7□□□□□ -1.98
SMAD3-212ENST00000559937 SPRR2EP22531 72 aa2.69□□□□□ -1.98
SMAD3-212ENST00000559937 SPRR2BP35325 72 aa2.69□□□□□ -1.98
SMAD3-212ENST00000559937 SPRR2AP35326 72 aa2.69□□□□□ -1.98
SMAD3-212ENST00000559937 MT1MQ8N339 61 aa2.68□□□□□ -1.98
SMAD3-212ENST00000559937 LCE1AQ5T7P2 110 aa2.67□□□□□ -1.98
SMAD3-212ENST00000559937 LCE5AQ5TCM9 118 aa2.63□□□□□ -1.99
SMAD3-212ENST00000559937 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
SMAD3-212ENST00000559937 KRTAP2-2Q9BYT5 123 aa2.62□□□□□ -1.99
SMAD3-212ENST00000559937 SPRR2DP22532 72 aa2.6□□□□□ -1.99
SMAD3-212ENST00000559937 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
SMAD3-212ENST00000559937 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
SMAD3-212ENST00000559937 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -1.99
SMAD3-212ENST00000559937 DSTQ03001 7570 aaKnown RBP2.54□□□□□ -2
SMAD3-212ENST00000559937 LCE1DQ5T752 114 aa2.53□□□□□ -2
SMAD3-212ENST00000559937 KRTAP4-9Q9BYQ8 210 aa2.53□□□□□ -2
SMAD3-212ENST00000559937 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
SMAD3-212ENST00000559937 MT1AP04731 61 aa2.43□□□□□ -2.02
SMAD3-212ENST00000559937 KRTAP5-5Q701N2 237 aaPredicted RBP2.4□□□□□ -2.03
SMAD3-212ENST00000559937 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
SMAD3-212ENST00000559937 KRTAP6-1Q3LI64 71 aa2.38□□□□□ -2.03
SMAD3-212ENST00000559937 KRTAP4-11Q9BYQ6 195 aa2.37□□□□□ -2.03
SMAD3-212ENST00000559937 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
SMAD3-212ENST00000559937 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
SMAD3-212ENST00000559937 LCE4AQ5TA78 99 aa2.31□□□□□ -2.04
SMAD3-212ENST00000559937 KRTAP5-7Q6L8G8 165 aa2.3□□□□□ -2.04
SMAD3-212ENST00000559937 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
SMAD3-212ENST00000559937 MT4P47944 62 aa2.28□□□□□ -2.04
SMAD3-212ENST00000559937 KRTAP5-4Q6L8H1 288 aa2.27□□□□□ -2.05
SMAD3-212ENST00000559937 LCE3DQ9BYE3 92 aa2.25□□□□□ -2.05
SMAD3-212ENST00000559937 LCE3EQ5T5B0 92 aa2.23□□□□□ -2.05
SMAD3-212ENST00000559937 SYNE1Q8NF91 8797 aaKnown RBP2.2□□□□□ -2.06
SMAD3-212ENST00000559937 MT3P25713 68 aa2.19□□□□□ -2.06
SMAD3-212ENST00000559937 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
SMAD3-212ENST00000559937 KRTAP6-2Q3LI66 62 aa2.14□□□□□ -2.07
SMAD3-212ENST00000559937 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
SMAD3-212ENST00000559937 KRTAP20-2Q3LI61 65 aa2.13□□□□□ -2.07
SMAD3-212ENST00000559937 PRM1P04553 51 aa2.03□□□□□ -2.08
SMAD3-212ENST00000559937 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
SMAD3-212ENST00000559937 OBSCNQ5VST9 7968 aa2□□□□□ -2.09
SMAD3-212ENST00000559937 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
SMAD3-212ENST00000559937 LCE1EQ5T753 118 aa1.86□□□□□ -2.11
SMAD3-212ENST00000559937 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
SMAD3-212ENST00000559937 KRTAP5-1Q6L8H4 278 aa1.78□□□□□ -2.12
SMAD3-212ENST00000559937 LCE1CQ5T751 118 aa1.73□□□□□ -2.13
SMAD3-212ENST00000559937 LCE1BQ5T7P3 118 aa1.73□□□□□ -2.13
SMAD3-212ENST00000559937 KRTAP5-11Q6L8G4 156 aa1.63□□□□□ -2.15
SMAD3-212ENST00000559937 KRTAP21-2Q3LI59 83 aa1.56□□□□□ -2.16
SMAD3-212ENST00000559937 KRTAP4-4Q9BYR3 166 aa1.55□□□□□ -2.16
SMAD3-212ENST00000559937 LCE1FQ5T754 118 aa1.41□□□□□ -2.18
SMAD3-212ENST00000559937 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
SMAD3-212ENST00000559937 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
SMAD3-212ENST00000559937 MUC19Q7Z5P9 8384 aa1.26□□□□□ -2.21
SMAD3-212ENST00000559937 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 65.8 ms