RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 KRTAP19-8Q3LI54 63 aa0.91□□□□□ -2.26
RGPD1-204ENST00000559485 MT1HP80294 61 aa0.89□□□□□ -2.27
RGPD1-204ENST00000559485 KRTAP19-2Q3LHN2 52 aa0.88□□□□□ -2.27
RGPD1-204ENST00000559485 AHNAKQ09666 5890 aaKnown RBP0.88□□□□□ -2.27
RGPD1-204ENST00000559485 UBR4Q5T4S7 5183 aa0.87□□□□□ -2.27
RGPD1-204ENST00000559485 MUC5BQ9HC84 5762 aaPredicted RBP0.87□□□□□ -2.27
RGPD1-204ENST00000559485 HMCN1Q96RW7 5635 aa0.87□□□□□ -2.27
RGPD1-204ENST00000559485 NEBP20929 6669 aa0.87□□□□□ -2.27
RGPD1-204ENST00000559485 MT2AP02795 61 aa0.87□□□□□ -2.27
RGPD1-204ENST00000559485 KRTAP10-5P60370 271 aa0.87□□□□□ -2.27
RGPD1-204ENST00000559485 KRTAP20-1Q3LI63 56 aa0.86□□□□□ -2.27
RGPD1-204ENST00000559485 CRCT1Q9UGL9 99 aa0.86□□□□□ -2.27
RGPD1-204ENST00000559485 MUC2Q02817 5179 aa0.86□□□□□ -2.27
RGPD1-204ENST00000559485 MT1FP04733 61 aa0.85□□□□□ -2.27
RGPD1-204ENST00000559485 KRTAP2-3P0C7H8 128 aa0.85□□□□□ -2.27
RGPD1-204ENST00000559485 KRTAP2-4Q9BYR9 128 aa0.85□□□□□ -2.27
RGPD1-204ENST00000559485 KRTAP2-1Q9BYU5 128 aa0.85□□□□□ -2.27
RGPD1-204ENST00000559485 KIAA1109Q2LD37 5005 aa0.85□□□□□ -2.27
RGPD1-204ENST00000559485 MT1XP80297 61 aa0.84□□□□□ -2.27
RGPD1-204ENST00000559485 BIRC6Q9NR09 4857 aa0.84□□□□□ -2.27
RGPD1-204ENST00000559485 KRTAP6-3Q3LI67 103 aa0.84□□□□□ -2.28
RGPD1-204ENST00000559485 HERC2O95714 4834 aa0.84□□□□□ -2.28
RGPD1-204ENST00000559485 KRTAP19-5Q3LI72 72 aa0.83□□□□□ -2.28
RGPD1-204ENST00000559485 RNF213Q63HN8 5207 aa0.82□□□□□ -2.28
RGPD1-204ENST00000559485 MT1BP07438 61 aa0.82□□□□□ -2.28
RGPD1-204ENST00000559485 MT1EP04732 61 aa0.82□□□□□ -2.28
RGPD1-204ENST00000559485 KRTAP12-4P60329 112 aa0.81□□□□□ -2.28
RGPD1-204ENST00000559485 KRTAP10-7P60409 375 aaPredicted RBP0.8□□□□□ -2.28
RGPD1-204ENST00000559485 MT1AP04731 61 aa0.8□□□□□ -2.28
RGPD1-204ENST00000559485 LRP2P98164 4655 aa0.79□□□□□ -2.28
RGPD1-204ENST00000559485 LCE3EQ5T5B0 92 aa0.78□□□□□ -2.28
RGPD1-204ENST00000559485 MT1LQ93083 61 aa0.78□□□□□ -2.28
RGPD1-204ENST00000559485 MUC19Q7Z5P9 8384 aa0.78□□□□□ -2.28
RGPD1-204ENST00000559485 HMCN2Q8NDA2 5059 aa0.78□□□□□ -2.28
RGPD1-204ENST00000559485 LCE3DQ9BYE3 92 aa0.76□□□□□ -2.29
RGPD1-204ENST00000559485 FAT4Q6V0I7 4981 aa0.76□□□□□ -2.29
RGPD1-204ENST00000559485 SPRR2AP35326 72 aa0.75□□□□□ -2.29
RGPD1-204ENST00000559485 KRTAP5-8O75690 187 aa0.75□□□□□ -2.29
RGPD1-204ENST00000559485 MT1GP13640 62 aa0.75□□□□□ -2.29
RGPD1-204ENST00000559485 PRM1P04553 51 aa0.74□□□□□ -2.29
RGPD1-204ENST00000559485 SPRR2BP35325 72 aa0.74□□□□□ -2.29
RGPD1-204ENST00000559485 KRTAP4-3Q9BYR4 195 aa0.74□□□□□ -2.29
RGPD1-204ENST00000559485 SPRR2FQ96RM1 72 aa0.73□□□□□ -2.29
RGPD1-204ENST00000559485 KRTAP19-6Q3LI70 58 aa0.73□□□□□ -2.29
RGPD1-204ENST00000559485 AHNAK2Q8IVF2 5795 aa0.73□□□□□ -2.29
RGPD1-204ENST00000559485 LCE1EQ5T753 118 aa0.72□□□□□ -2.29
RGPD1-204ENST00000559485 KRTAP5-7Q6L8G8 165 aa0.72□□□□□ -2.29
RGPD1-204ENST00000559485 KRTAP19-7Q3SYF9 63 aa0.72□□□□□ -2.29
RGPD1-204ENST00000559485 KRTAP19-3Q7Z4W3 81 aa0.71□□□□□ -2.3
RGPD1-204ENST00000559485 KRTAP9-6A8MVA2 160 aa0.71□□□□□ -2.3
RGPD1-204ENST00000559485 MT1MQ8N339 61 aa0.7□□□□□ -2.3
RGPD1-204ENST00000559485 KRTAP5-5Q701N2 237 aaPredicted RBP0.7□□□□□ -2.3
RGPD1-204ENST00000559485 SPRR2EP22531 72 aa0.68□□□□□ -2.3
RGPD1-204ENST00000559485 USH2AO75445 5202 aa0.68□□□□□ -2.3
RGPD1-204ENST00000559485 SSPOA2VEC9 5147 aa0.68□□□□□ -2.3
RGPD1-204ENST00000559485 SPRR2DP22532 72 aa0.68□□□□□ -2.3
RGPD1-204ENST00000559485 KMT2DO14686 5537 aa0.66□□□□□ -2.3
RGPD1-204ENST00000559485 KRTAP6-2Q3LI66 62 aa0.65□□□□□ -2.31
RGPD1-204ENST00000559485 MUC12Q9UKN1 5478 aa0.63□□□□□ -2.31
RGPD1-204ENST00000559485 SYNE2Q8WXH0 6885 aaKnown RBP0.62□□□□□ -2.31
RGPD1-204ENST00000559485 KRTAP6-1Q3LI64 71 aa0.61□□□□□ -2.31
RGPD1-204ENST00000559485 DSTQ03001 7570 aaKnown RBP0.59□□□□□ -2.31
RGPD1-204ENST00000559485 MDN1Q9NU22 5596 aa0.59□□□□□ -2.31
RGPD1-204ENST00000559485 MACF1Q9UPN3 7388 aaKnown RBP0.59□□□□□ -2.32
RGPD1-204ENST00000559485 FCGBPQ9Y6R7 5405 aaPredicted RBP0.59□□□□□ -2.32
RGPD1-204ENST00000559485 KRTAP5-10Q6L8G5 202 aa0.56□□□□□ -2.32
RGPD1-204ENST00000559485 SYNE1Q8NF91 8797 aaKnown RBP0.56□□□□□ -2.32
RGPD1-204ENST00000559485 MUC5ACP98088 5654 aa0.56□□□□□ -2.32
RGPD1-204ENST00000559485 MT4P47944 62 aa0.55□□□□□ -2.32
RGPD1-204ENST00000559485 FSIP2Q5CZC0 6907 aa0.54□□□□□ -2.32
RGPD1-204ENST00000559485 LCE1BQ5T7P3 118 aa0.52□□□□□ -2.33
RGPD1-204ENST00000559485 KRTAP20-2Q3LI61 65 aa0.5□□□□□ -2.33
RGPD1-204ENST00000559485 LCE1CQ5T751 118 aa0.49□□□□□ -2.33
RGPD1-204ENST00000559485 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
RGPD1-204ENST00000559485 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
RGPD1-204ENST00000559485 KRTAP21-2Q3LI59 83 aa0.38□□□□□ -2.35
RGPD1-204ENST00000559485 MUC16Q8WXI7 14507 aa0.35□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms