RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 KRTAP4-9Q9BYQ8 210 aa5.39□□□□□ -1.55
RPL28-207ENST00000558815 GPR98Q8WXG9 6306 aa5.37□□□□□ -1.55
RPL28-207ENST00000558815 PSPHP1O15172 72 aa5.34□□□□□ -1.55
RPL28-207ENST00000558815 KRTAP4-3Q9BYR4 195 aa5.34□□□□□ -1.55
RPL28-207ENST00000558815 V9GYY9 64 aa5.31□□□□□ -1.56
RPL28-207ENST00000558815 K7ERS5 55 aa5.3□□□□□ -1.56
RPL28-207ENST00000558815 KRTAP12-3P60328 96 aa5.3□□□□□ -1.56
RPL28-207ENST00000558815 Q1T7F1 81 aa5.26□□□□□ -1.57
RPL28-207ENST00000558815 KRTAP25-1Q3LHN0 102 aa5.24□□□□□ -1.57
RPL28-207ENST00000558815 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
RPL28-207ENST00000558815 MT4P47944 62 aa5.23□□□□□ -1.57
RPL28-207ENST00000558815 SVIPQ8NHG7 77 aa5.23□□□□□ -1.57
RPL28-207ENST00000558815 LOC100996750A0A140TA64 210 aa5.22□□□□□ -1.57
RPL28-207ENST00000558815 LCE4AQ5TA78 99 aa5.22□□□□□ -1.57
RPL28-207ENST00000558815 KRTAP4-6Q9BYQ5 205 aa5.22□□□□□ -1.57
RPL28-207ENST00000558815 KRTAP4-7Q9BYR0 210 aa5.22□□□□□ -1.57
RPL28-207ENST00000558815 A6NED7 52 aa5.16□□□□□ -1.58
RPL28-207ENST00000558815 KRTAP5-4Q6L8H1 288 aa5.1□□□□□ -1.59
RPL28-207ENST00000558815 HMCN1Q96RW7 5635 aa5.1□□□□□ -1.59
RPL28-207ENST00000558815 CDC42SE1Q9NRR8 79 aa5.02□□□□□ -1.61
RPL28-207ENST00000558815 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
RPL28-207ENST00000558815 RPS28P62857 69 aaKnown RBP4.97□□□□□ -1.61
RPL28-207ENST00000558815 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.62
RPL28-207ENST00000558815 AHNAK2Q8IVF2 5795 aa4.94□□□□□ -1.62
RPL28-207ENST00000558815 ROMO1P60602 79 aa4.93□□□□□ -1.62
RPL28-207ENST00000558815 KRTAP5-5Q701N2 237 aaPredicted RBP4.92□□□□□ -1.62
RPL28-207ENST00000558815 KRTAP19-4Q3LI73 84 aa4.9□□□□□ -1.63
RPL28-207ENST00000558815 LCE3CQ5T5A8 94 aa4.87□□□□□ -1.63
RPL28-207ENST00000558815 KRTAP20-2Q3LI61 65 aa4.85□□□□□ -1.63
RPL28-207ENST00000558815 KRTAP12-4P60329 112 aa4.82□□□□□ -1.64
RPL28-207ENST00000558815 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
RPL28-207ENST00000558815 KRTAP5-10Q6L8G5 202 aa4.81□□□□□ -1.64
RPL28-207ENST00000558815 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
RPL28-207ENST00000558815 KRTAP5-3Q6L8H2 238 aa4.73□□□□□ -1.65
RPL28-207ENST00000558815 MT1AP04731 61 aa4.63□□□□□ -1.67
RPL28-207ENST00000558815 KRTAP6-1Q3LI64 71 aa4.62□□□□□ -1.67
RPL28-207ENST00000558815 KRTAP5-7Q6L8G8 165 aa4.61□□□□□ -1.67
RPL28-207ENST00000558815 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
RPL28-207ENST00000558815 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
RPL28-207ENST00000558815 PRO0628Q9UI54 55 aa4.51□□□□□ -1.69
RPL28-207ENST00000558815 KRTAP5-2Q701N4 177 aa4.48□□□□□ -1.69
RPL28-207ENST00000558815 KRTAP9-4Q9BYQ2 154 aa4.47□□□□□ -1.69
RPL28-207ENST00000558815 BRK1Q8WUW1 75 aa4.46□□□□□ -1.7
RPL28-207ENST00000558815 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
RPL28-207ENST00000558815 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
RPL28-207ENST00000558815 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.71
RPL28-207ENST00000558815 KRTAP5-8O75690 187 aa4.25□□□□□ -1.73
RPL28-207ENST00000558815 OBSCNQ5VST9 7968 aa4.25□□□□□ -1.73
RPL28-207ENST00000558815 MT3P25713 68 aa4.23□□□□□ -1.73
RPL28-207ENST00000558815 PMAIP1Q13794 54 aa4.22□□□□□ -1.73
RPL28-207ENST00000558815 KTN1-AS1Q86SY8 53 aa4.1□□□□□ -1.75
RPL28-207ENST00000558815 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
RPL28-207ENST00000558815 AHNAKQ09666 5890 aaKnown RBP4.06□□□□□ -1.76
RPL28-207ENST00000558815 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
RPL28-207ENST00000558815 MUC5ACP98088 5654 aa4.01□□□□□ -1.77
RPL28-207ENST00000558815 KRTAP5-1Q6L8H4 278 aa4.01□□□□□ -1.77
RPL28-207ENST00000558815 MUC5BQ9HC84 5762 aaPredicted RBP4□□□□□ -1.77
RPL28-207ENST00000558815 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
RPL28-207ENST00000558815 LCE1BQ5T7P3 118 aa3.71□□□□□ -1.82
RPL28-207ENST00000558815 H3BS24 57 aa3.58□□□□□ -1.84
RPL28-207ENST00000558815 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
RPL28-207ENST00000558815 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
RPL28-207ENST00000558815 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
RPL28-207ENST00000558815 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
RPL28-207ENST00000558815 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
RPL28-207ENST00000558815 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
RPL28-207ENST00000558815 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
RPL28-207ENST00000558815 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
RPL28-207ENST00000558815 KRTAP21-2Q3LI59 83 aa3.02□□□□□ -1.93
RPL28-207ENST00000558815 A0A0A0MQY5 61 aa2.97□□□□□ -1.93
RPL28-207ENST00000558815 PHGR1C9JFL3 82 aa2.84□□□□□ -1.95
RPL28-207ENST00000558815 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
RPL28-207ENST00000558815 INE1O15225 51 aa2.75□□□□□ -1.97
RPL28-207ENST00000558815 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
RPL28-207ENST00000558815 PRM1P04553 51 aa2.55□□□□□ -2
RPL28-207ENST00000558815 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
RPL28-207ENST00000558815 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms