RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 HERC1Q15751 4861 aa1.27□□□□□ -2.21
HERC1-203ENST00000558532 RYR1P21817 5038 aa1.27□□□□□ -2.21
HERC1-203ENST00000558532 KMT2CQ8NEZ4 4911 aaKnown RBP1.27□□□□□ -2.21
HERC1-203ENST00000558532 MUC17Q685J3 4493 aa1.27□□□□□ -2.21
HERC1-203ENST00000558532 LRP2P98164 4655 aa1.27□□□□□ -2.21
HERC1-203ENST00000558532 LPAP08519 4548 aa1.27□□□□□ -2.21
HERC1-203ENST00000558532 SPRR2GQ9BYE4 73 aa1.26□□□□□ -2.21
HERC1-203ENST00000558532 KRTAP4-1Q9BYQ7 146 aa1.26□□□□□ -2.21
HERC1-203ENST00000558532 KRTAP12-4P60329 112 aa1.25□□□□□ -2.21
HERC1-203ENST00000558532 KRTAP12-3P60328 96 aa1.24□□□□□ -2.21
HERC1-203ENST00000558532 KRTAP21-3Q3LHN1 58 aa1.23□□□□□ -2.21
HERC1-203ENST00000558532 KRTAP21-2Q3LI59 83 aa1.23□□□□□ -2.21
HERC1-203ENST00000558532 KRTAP6-3Q3LI67 103 aa1.22□□□□□ -2.21
HERC1-203ENST00000558532 KRTAP19-8Q3LI54 63 aa1.2□□□□□ -2.22
HERC1-203ENST00000558532 RYR3Q15413 4870 aa1.2□□□□□ -2.22
HERC1-203ENST00000558532 KRTAP2-3P0C7H8 128 aa1.18□□□□□ -2.22
HERC1-203ENST00000558532 KRTAP2-4Q9BYR9 128 aa1.18□□□□□ -2.22
HERC1-203ENST00000558532 KRTAP2-1Q9BYU5 128 aa1.18□□□□□ -2.22
HERC1-203ENST00000558532 MT1XP80297 61 aa1.16□□□□□ -2.22
HERC1-203ENST00000558532 MT1BP07438 61 aa1.15□□□□□ -2.23
HERC1-203ENST00000558532 KIAA1109Q2LD37 5005 aa1.14□□□□□ -2.23
HERC1-203ENST00000558532 ABCA13Q86UQ4 5058 aa1.14□□□□□ -2.23
HERC1-203ENST00000558532 BIRC6Q9NR09 4857 aa1.14□□□□□ -2.23
HERC1-203ENST00000558532 MT2AP02795 61 aa1.13□□□□□ -2.23
HERC1-203ENST00000558532 MT1FP04733 61 aa1.12□□□□□ -2.23
HERC1-203ENST00000558532 KRTAP19-5Q3LI72 72 aa1.11□□□□□ -2.23
HERC1-203ENST00000558532 HERC2O95714 4834 aa1.11□□□□□ -2.23
HERC1-203ENST00000558532 MT1HP80294 61 aa1.1□□□□□ -2.23
HERC1-203ENST00000558532 HMCN1Q96RW7 5635 aa1.08□□□□□ -2.24
HERC1-203ENST00000558532 PCLOQ9Y6V0 5065 aa1.08□□□□□ -2.24
HERC1-203ENST00000558532 CRCT1Q9UGL9 99 aa1.07□□□□□ -2.24
HERC1-203ENST00000558532 HMCN2Q8NDA2 5059 aa1.07□□□□□ -2.24
HERC1-203ENST00000558532 KRTAP19-7Q3SYF9 63 aa1.05□□□□□ -2.24
HERC1-203ENST00000558532 EPPK1P58107 5090 aaKnown RBP1.04□□□□□ -2.24
HERC1-203ENST00000558532 M0R2T5 61 aa1.04□□□□□ -2.24
HERC1-203ENST00000558532 UBR4Q5T4S7 5183 aa1.04□□□□□ -2.24
HERC1-203ENST00000558532 MT1LQ93083 61 aa1.02□□□□□ -2.25
HERC1-203ENST00000558532 MUC2Q02817 5179 aa1.01□□□□□ -2.25
HERC1-203ENST00000558532 MT1EP04732 61 aa1.01□□□□□ -2.25
HERC1-203ENST00000558532 RNF213Q63HN8 5207 aa0.97□□□□□ -2.25
HERC1-203ENST00000558532 FAT4Q6V0I7 4981 aa0.96□□□□□ -2.26
HERC1-203ENST00000558532 MT1AP04731 61 aa0.96□□□□□ -2.26
HERC1-203ENST00000558532 MT1MQ8N339 61 aa0.92□□□□□ -2.26
HERC1-203ENST00000558532 FCGBPQ9Y6R7 5405 aaPredicted RBP0.91□□□□□ -2.26
HERC1-203ENST00000558532 PRM1P04553 51 aa0.9□□□□□ -2.27
HERC1-203ENST00000558532 MT1GP13640 62 aa0.9□□□□□ -2.27
HERC1-203ENST00000558532 KRTAP19-3Q7Z4W3 81 aa0.9□□□□□ -2.27
HERC1-203ENST00000558532 KMT2DO14686 5537 aa0.87□□□□□ -2.27
HERC1-203ENST00000558532 KRTAP19-6Q3LI70 58 aa0.87□□□□□ -2.27
HERC1-203ENST00000558532 SPRR2FQ96RM1 72 aa0.87□□□□□ -2.27
HERC1-203ENST00000558532 USH2AO75445 5202 aa0.86□□□□□ -2.27
HERC1-203ENST00000558532 SSPOA2VEC9 5147 aa0.85□□□□□ -2.27
HERC1-203ENST00000558532 KRTAP6-2Q3LI66 62 aa0.85□□□□□ -2.27
HERC1-203ENST00000558532 KRTAP6-1Q3LI64 71 aa0.84□□□□□ -2.27
HERC1-203ENST00000558532 SYNE1Q8NF91 8797 aaKnown RBP0.83□□□□□ -2.28
HERC1-203ENST00000558532 SPRR2AP35326 72 aa0.82□□□□□ -2.28
HERC1-203ENST00000558532 SPRR2EP22531 72 aa0.79□□□□□ -2.28
HERC1-203ENST00000558532 SPRR2BP35325 72 aa0.79□□□□□ -2.28
HERC1-203ENST00000558532 GPR98Q8WXG9 6306 aa0.79□□□□□ -2.28
HERC1-203ENST00000558532 SPRR2DP22532 72 aa0.75□□□□□ -2.29
HERC1-203ENST00000558532 MUC12Q9UKN1 5478 aa0.73□□□□□ -2.29
HERC1-203ENST00000558532 MDN1Q9NU22 5596 aa0.69□□□□□ -2.3
HERC1-203ENST00000558532 KRTAP5-10Q6L8G5 202 aa0.68□□□□□ -2.3
HERC1-203ENST00000558532 MUC5BQ9HC84 5762 aaPredicted RBP0.65□□□□□ -2.31
HERC1-203ENST00000558532 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
HERC1-203ENST00000558532 DSTQ03001 7570 aaKnown RBP0.64□□□□□ -2.31
HERC1-203ENST00000558532 MUC5ACP98088 5654 aa0.62□□□□□ -2.31
HERC1-203ENST00000558532 KRTAP20-2Q3LI61 65 aa0.59□□□□□ -2.31
HERC1-203ENST00000558532 AHNAKQ09666 5890 aaKnown RBP0.59□□□□□ -2.32
HERC1-203ENST00000558532 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
HERC1-203ENST00000558532 FSIP2Q5CZC0 6907 aa0.57□□□□□ -2.32
HERC1-203ENST00000558532 MACF1Q9UPN3 7388 aaKnown RBP0.56□□□□□ -2.32
HERC1-203ENST00000558532 SYNE2Q8WXH0 6885 aaKnown RBP0.56□□□□□ -2.32
HERC1-203ENST00000558532 KRTAP20-1Q3LI63 56 aa0.52□□□□□ -2.33
HERC1-203ENST00000558532 MT4P47944 62 aa0.49□□□□□ -2.33
HERC1-203ENST00000558532 AHNAK2Q8IVF2 5795 aa0.47□□□□□ -2.33
HERC1-203ENST00000558532 NEBP20929 6669 aa0.45□□□□□ -2.34
HERC1-203ENST00000558532 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 87.9 ms