RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 A8MU10 97 aa4.37□□□□□ -1.71
HERC1-202ENST00000558324 UQCR11O14957 56 aa4.37□□□□□ -1.71
HERC1-202ENST00000558324 KRTAP19-5Q3LI72 72 aa4.37□□□□□ -1.71
HERC1-202ENST00000558324 KTN1-AS1Q86SY8 53 aa4.36□□□□□ -1.71
HERC1-202ENST00000558324 MIR22HGQ0VDD5 57 aa4.33□□□□□ -1.72
HERC1-202ENST00000558324 H3BS24 57 aa4.32□□□□□ -1.72
HERC1-202ENST00000558324 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
HERC1-202ENST00000558324 MT1GP13640 62 aa4.29□□□□□ -1.72
HERC1-202ENST00000558324 GPR98Q8WXG9 6306 aa4.29□□□□□ -1.72
HERC1-202ENST00000558324 PP632Q6XCG6 107 aa4.27□□□□□ -1.73
HERC1-202ENST00000558324 LCE3AQ5TA76 89 aa4.26□□□□□ -1.73
HERC1-202ENST00000558324 C10orf95Q9H7T3 257 aa4.25□□□□□ -1.73
HERC1-202ENST00000558324 TNP1P09430 55 aa4.24□□□□□ -1.73
HERC1-202ENST00000558324 MT1MQ8N339 61 aa4.24□□□□□ -1.73
HERC1-202ENST00000558324 MT1LQ93083 61 aa4.24□□□□□ -1.73
HERC1-202ENST00000558324 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
HERC1-202ENST00000558324 K7ERS5 55 aa4.17□□□□□ -1.74
HERC1-202ENST00000558324 LCE1DQ5T752 114 aa4.17□□□□□ -1.74
HERC1-202ENST00000558324 MT4P47944 62 aa4.15□□□□□ -1.75
HERC1-202ENST00000558324 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
HERC1-202ENST00000558324 KRTAP12-3P60328 96 aa4.08□□□□□ -1.76
HERC1-202ENST00000558324 HMCN1Q96RW7 5635 aa4.08□□□□□ -1.76
HERC1-202ENST00000558324 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
HERC1-202ENST00000558324 KRTAP4-7Q9BYR0 210 aa4.06□□□□□ -1.76
HERC1-202ENST00000558324 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
HERC1-202ENST00000558324 KRTAP4-6Q9BYQ5 205 aa4□□□□□ -1.77
HERC1-202ENST00000558324 AHNAK2Q8IVF2 5795 aa3.98□□□□□ -1.77
HERC1-202ENST00000558324 ROMO1P60602 79 aa3.97□□□□□ -1.77
HERC1-202ENST00000558324 KRTAP25-1Q3LHN0 102 aa3.96□□□□□ -1.78
HERC1-202ENST00000558324 KRTAP5-10Q6L8G5 202 aa3.88□□□□□ -1.79
HERC1-202ENST00000558324 KRTAP5-5Q701N2 237 aaPredicted RBP3.87□□□□□ -1.79
HERC1-202ENST00000558324 LOC100996750A0A140TA64 210 aa3.86□□□□□ -1.79
HERC1-202ENST00000558324 KRTAP20-2Q3LI61 65 aa3.84□□□□□ -1.79
HERC1-202ENST00000558324 KRTAP12-4P60329 112 aa3.79□□□□□ -1.8
HERC1-202ENST00000558324 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
HERC1-202ENST00000558324 SYNE1Q8NF91 8797 aaKnown RBP3.79□□□□□ -1.8
HERC1-202ENST00000558324 SPRR5A0A1B0GTR4 108 aa3.78□□□□□ -1.8
HERC1-202ENST00000558324 KRTAP15-1Q3LI76 137 aa3.78□□□□□ -1.8
HERC1-202ENST00000558324 KRTAP23-1A1A580 65 aa3.76□□□□□ -1.81
HERC1-202ENST00000558324 KRTAP19-4Q3LI73 84 aa3.75□□□□□ -1.81
HERC1-202ENST00000558324 LCE3CQ5T5A8 94 aa3.74□□□□□ -1.81
HERC1-202ENST00000558324 KRTAP5-7Q6L8G8 165 aa3.72□□□□□ -1.81
HERC1-202ENST00000558324 MT1AP04731 61 aa3.6□□□□□ -1.83
HERC1-202ENST00000558324 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
HERC1-202ENST00000558324 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
HERC1-202ENST00000558324 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
HERC1-202ENST00000558324 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
HERC1-202ENST00000558324 KRTAP9-4Q9BYQ2 154 aa3.48□□□□□ -1.85
HERC1-202ENST00000558324 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
HERC1-202ENST00000558324 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
HERC1-202ENST00000558324 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
HERC1-202ENST00000558324 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
HERC1-202ENST00000558324 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
HERC1-202ENST00000558324 A0A0A0MQY5 61 aa3.31□□□□□ -1.88
HERC1-202ENST00000558324 MT3P25713 68 aa3.29□□□□□ -1.88
HERC1-202ENST00000558324 AHNAKQ09666 5890 aaKnown RBP3.29□□□□□ -1.88
HERC1-202ENST00000558324 MUC5ACP98088 5654 aa3.28□□□□□ -1.89
HERC1-202ENST00000558324 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
HERC1-202ENST00000558324 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
HERC1-202ENST00000558324 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
HERC1-202ENST00000558324 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
HERC1-202ENST00000558324 LCE1EQ5T753 118 aa3□□□□□ -1.93
HERC1-202ENST00000558324 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
HERC1-202ENST00000558324 INE1O15225 51 aa2.9□□□□□ -1.95
HERC1-202ENST00000558324 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
HERC1-202ENST00000558324 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
HERC1-202ENST00000558324 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
HERC1-202ENST00000558324 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
HERC1-202ENST00000558324 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
HERC1-202ENST00000558324 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
HERC1-202ENST00000558324 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
HERC1-202ENST00000558324 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
HERC1-202ENST00000558324 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
HERC1-202ENST00000558324 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
HERC1-202ENST00000558324 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
HERC1-202ENST00000558324 PRM1P04553 51 aa2.07□□□□□ -2.08
HERC1-202ENST00000558324 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
HERC1-202ENST00000558324 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 33.9 ms