RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 A8MU10 97 aa5.53□□□□□ -1.52
TPM1-211ENST00000558314 RPS28P62857 69 aaKnown RBP5.53□□□□□ -1.52
TPM1-211ENST00000558314 MT1MQ8N339 61 aa5.53□□□□□ -1.52
TPM1-211ENST00000558314 MT1LQ93083 61 aa5.51□□□□□ -1.53
TPM1-211ENST00000558314 PSPHP1O15172 72 aa5.48□□□□□ -1.53
TPM1-211ENST00000558314 LCE4AQ5TA78 99 aa5.48□□□□□ -1.53
TPM1-211ENST00000558314 MIR22HGQ0VDD5 57 aa5.47□□□□□ -1.53
TPM1-211ENST00000558314 LCE3AQ5TA76 89 aa5.47□□□□□ -1.53
TPM1-211ENST00000558314 KRTAP4-3Q9BYR4 195 aa5.47□□□□□ -1.53
TPM1-211ENST00000558314 C10orf95Q9H7T3 257 aa5.47□□□□□ -1.53
TPM1-211ENST00000558314 TNP1P09430 55 aa5.44□□□□□ -1.54
TPM1-211ENST00000558314 HMCN1Q96RW7 5635 aa5.43□□□□□ -1.54
TPM1-211ENST00000558314 K7ERS5 55 aa5.42□□□□□ -1.54
TPM1-211ENST00000558314 A6NED7 52 aa5.37□□□□□ -1.55
TPM1-211ENST00000558314 KRTAP4-6Q9BYQ5 205 aa5.32□□□□□ -1.56
TPM1-211ENST00000558314 AHNAK2Q8IVF2 5795 aa5.31□□□□□ -1.56
TPM1-211ENST00000558314 KRTAP5-4Q6L8H1 288 aa5.3□□□□□ -1.56
TPM1-211ENST00000558314 KRTAP4-7Q9BYR0 210 aa5.29□□□□□ -1.56
TPM1-211ENST00000558314 KRTAP12-3P60328 96 aa5.24□□□□□ -1.57
TPM1-211ENST00000558314 KRTAP5-10Q6L8G5 202 aa5.2□□□□□ -1.58
TPM1-211ENST00000558314 CDC42SE1Q9NRR8 79 aa5.17□□□□□ -1.58
TPM1-211ENST00000558314 KRTAP25-1Q3LHN0 102 aa5.16□□□□□ -1.58
TPM1-211ENST00000558314 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
TPM1-211ENST00000558314 KRTAP20-2Q3LI61 65 aa5.07□□□□□ -1.6
TPM1-211ENST00000558314 LOC100996750A0A140TA64 210 aa5.02□□□□□ -1.61
TPM1-211ENST00000558314 ROMO1P60602 79 aa5.02□□□□□ -1.61
TPM1-211ENST00000558314 KRTAP5-7Q6L8G8 165 aa5.02□□□□□ -1.61
TPM1-211ENST00000558314 KRTAP5-5Q701N2 237 aaPredicted RBP5.02□□□□□ -1.61
TPM1-211ENST00000558314 KRTAP12-4P60329 112 aa5.01□□□□□ -1.61
TPM1-211ENST00000558314 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
TPM1-211ENST00000558314 SPRR5A0A1B0GTR4 108 aa4.98□□□□□ -1.61
TPM1-211ENST00000558314 SYNE1Q8NF91 8797 aaKnown RBP4.9□□□□□ -1.62
TPM1-211ENST00000558314 BRK1Q8WUW1 75 aa4.9□□□□□ -1.63
TPM1-211ENST00000558314 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
TPM1-211ENST00000558314 KRTAP19-4Q3LI73 84 aa4.8□□□□□ -1.64
TPM1-211ENST00000558314 LCE3CQ5T5A8 94 aa4.8□□□□□ -1.64
TPM1-211ENST00000558314 MT1AP04731 61 aa4.68□□□□□ -1.66
TPM1-211ENST00000558314 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
TPM1-211ENST00000558314 KRTAP4-11Q9BYQ6 195 aa4.67□□□□□ -1.66
TPM1-211ENST00000558314 PMAIP1Q13794 54 aa4.64□□□□□ -1.67
TPM1-211ENST00000558314 KRTAP5-2Q701N4 177 aa4.6□□□□□ -1.67
TPM1-211ENST00000558314 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
TPM1-211ENST00000558314 KRTAP6-2Q3LI66 62 aa4.53□□□□□ -1.68
TPM1-211ENST00000558314 PRO0628Q9UI54 55 aa4.53□□□□□ -1.68
TPM1-211ENST00000558314 KRTAP9-6A8MVA2 160 aa4.52□□□□□ -1.69
TPM1-211ENST00000558314 KRTAP5-8O75690 187 aa4.5□□□□□ -1.69
TPM1-211ENST00000558314 AHNAKQ09666 5890 aaKnown RBP4.42□□□□□ -1.7
TPM1-211ENST00000558314 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
TPM1-211ENST00000558314 MUC5BQ9HC84 5762 aaPredicted RBP4.39□□□□□ -1.71
TPM1-211ENST00000558314 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
TPM1-211ENST00000558314 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
TPM1-211ENST00000558314 MT3P25713 68 aa4.3□□□□□ -1.72
TPM1-211ENST00000558314 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
TPM1-211ENST00000558314 KTN1-AS1Q86SY8 53 aa4.27□□□□□ -1.73
TPM1-211ENST00000558314 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
TPM1-211ENST00000558314 SVIPQ8NHG7 77 aa4.08□□□□□ -1.76
TPM1-211ENST00000558314 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
TPM1-211ENST00000558314 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
TPM1-211ENST00000558314 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
TPM1-211ENST00000558314 KRTAP4-2Q9BYR5 136 aa3.75□□□□□ -1.81
TPM1-211ENST00000558314 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
TPM1-211ENST00000558314 LCE1CQ5T751 118 aa3.64□□□□□ -1.83
TPM1-211ENST00000558314 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
TPM1-211ENST00000558314 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
TPM1-211ENST00000558314 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
TPM1-211ENST00000558314 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
TPM1-211ENST00000558314 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
TPM1-211ENST00000558314 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
TPM1-211ENST00000558314 H3BS24 57 aa3.19□□□□□ -1.9
TPM1-211ENST00000558314 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
TPM1-211ENST00000558314 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
TPM1-211ENST00000558314 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
TPM1-211ENST00000558314 A0A0A0MQY5 61 aa2.76□□□□□ -1.97
TPM1-211ENST00000558314 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
TPM1-211ENST00000558314 INE1O15225 51 aa2.69□□□□□ -1.98
TPM1-211ENST00000558314 PRM1P04553 51 aa2.54□□□□□ -2
TPM1-211ENST00000558314 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
TPM1-211ENST00000558314 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 91.3 ms