RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 KRTAP12-1P59990 96 aa3.82□□□□□ -1.8
SRP54-210ENST00000556380 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
SRP54-210ENST00000556380 KRTAP8-1Q8IUC2 63 aa3.81□□□□□ -1.8
SRP54-210ENST00000556380 A0A0A0MQY5 61 aa3.8□□□□□ -1.8
SRP54-210ENST00000556380 UQCR11O14957 56 aa3.8□□□□□ -1.8
SRP54-210ENST00000556380 SPINT4Q6UDR6 99 aa3.79□□□□□ -1.8
SRP54-210ENST00000556380 SPRR2FQ96RM1 72 aa3.79□□□□□ -1.8
SRP54-210ENST00000556380 Q1T7F1 81 aa3.78□□□□□ -1.8
SRP54-210ENST00000556380 A8MU10 97 aa3.77□□□□□ -1.81
SRP54-210ENST00000556380 RPS28P62857 69 aaKnown RBP3.76□□□□□ -1.81
SRP54-210ENST00000556380 SPRR2EP22531 72 aa3.7□□□□□ -1.82
SRP54-210ENST00000556380 SPRR2BP35325 72 aa3.7□□□□□ -1.82
SRP54-210ENST00000556380 SPRR2AP35326 72 aa3.7□□□□□ -1.82
SRP54-210ENST00000556380 MIR22HGQ0VDD5 57 aa3.69□□□□□ -1.82
SRP54-210ENST00000556380 PSPHP1O15172 72 aa3.67□□□□□ -1.82
SRP54-210ENST00000556380 K7ERS5 55 aa3.65□□□□□ -1.83
SRP54-210ENST00000556380 KRTAP20-1Q3LI63 56 aa3.65□□□□□ -1.83
SRP54-210ENST00000556380 C10orf95Q9H7T3 257 aa3.65□□□□□ -1.83
SRP54-210ENST00000556380 KRTAP19-7Q3SYF9 63 aa3.64□□□□□ -1.83
SRP54-210ENST00000556380 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
SRP54-210ENST00000556380 TNP1P09430 55 aa3.61□□□□□ -1.83
SRP54-210ENST00000556380 KRTAP2-3P0C7H8 128 aa3.61□□□□□ -1.83
SRP54-210ENST00000556380 KRTAP2-4Q9BYR9 128 aa3.61□□□□□ -1.83
SRP54-210ENST00000556380 A6NED7 52 aa3.6□□□□□ -1.83
SRP54-210ENST00000556380 MT1EP04732 61 aa3.59□□□□□ -1.83
SRP54-210ENST00000556380 SPRR2DP22532 72 aa3.57□□□□□ -1.84
SRP54-210ENST00000556380 KRTAP19-5Q3LI72 72 aa3.56□□□□□ -1.84
SRP54-210ENST00000556380 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
SRP54-210ENST00000556380 KRTAP25-1Q3LHN0 102 aa3.52□□□□□ -1.85
SRP54-210ENST00000556380 KRTAP19-3Q7Z4W3 81 aa3.52□□□□□ -1.85
SRP54-210ENST00000556380 KRTAP2-1Q9BYU5 128 aa3.5□□□□□ -1.85
SRP54-210ENST00000556380 CDC42SE1Q9NRR8 79 aa3.5□□□□□ -1.85
SRP54-210ENST00000556380 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
SRP54-210ENST00000556380 MT1GP13640 62 aa3.46□□□□□ -1.86
SRP54-210ENST00000556380 MT1LQ93083 61 aa3.45□□□□□ -1.86
SRP54-210ENST00000556380 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
SRP54-210ENST00000556380 KRTAP12-3P60328 96 aa3.4□□□□□ -1.87
SRP54-210ENST00000556380 ROMO1P60602 79 aa3.4□□□□□ -1.87
SRP54-210ENST00000556380 PP632Q6XCG6 107 aa3.4□□□□□ -1.87
SRP54-210ENST00000556380 MT1MQ8N339 61 aa3.4□□□□□ -1.87
SRP54-210ENST00000556380 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
SRP54-210ENST00000556380 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
SRP54-210ENST00000556380 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
SRP54-210ENST00000556380 BRK1Q8WUW1 75 aa3.26□□□□□ -1.89
SRP54-210ENST00000556380 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
SRP54-210ENST00000556380 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
SRP54-210ENST00000556380 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
SRP54-210ENST00000556380 PRAC1Q96KF2 57 aa3.14□□□□□ -1.91
SRP54-210ENST00000556380 MT4P47944 62 aa3.11□□□□□ -1.91
SRP54-210ENST00000556380 PMAIP1Q13794 54 aa3.1□□□□□ -1.91
SRP54-210ENST00000556380 GPR98Q8WXG9 6306 aa3.06□□□□□ -1.92
SRP54-210ENST00000556380 SYNE1Q8NF91 8797 aaKnown RBP3.05□□□□□ -1.92
SRP54-210ENST00000556380 PRO0628Q9UI54 55 aa3.03□□□□□ -1.92
SRP54-210ENST00000556380 AHNAK2Q8IVF2 5795 aa3.03□□□□□ -1.92
SRP54-210ENST00000556380 SPRR5A0A1B0GTR4 108 aa2.99□□□□□ -1.93
SRP54-210ENST00000556380 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
SRP54-210ENST00000556380 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
SRP54-210ENST00000556380 MT1AP04731 61 aa2.93□□□□□ -1.94
SRP54-210ENST00000556380 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
SRP54-210ENST00000556380 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
SRP54-210ENST00000556380 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
SRP54-210ENST00000556380 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
SRP54-210ENST00000556380 KTN1-AS1Q86SY8 53 aa2.86□□□□□ -1.95
SRP54-210ENST00000556380 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
SRP54-210ENST00000556380 KRTAP5-7Q6L8G8 165 aa2.75□□□□□ -1.97
SRP54-210ENST00000556380 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
SRP54-210ENST00000556380 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
SRP54-210ENST00000556380 MUC5ACP98088 5654 aa2.56□□□□□ -2
SRP54-210ENST00000556380 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
SRP54-210ENST00000556380 LUZP6Q538Z0 58 aa2.5□□□□□ -2.01
SRP54-210ENST00000556380 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
SRP54-210ENST00000556380 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
SRP54-210ENST00000556380 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
SRP54-210ENST00000556380 INE1O15225 51 aa1.81□□□□□ -2.12
SRP54-210ENST00000556380 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
SRP54-210ENST00000556380 PRM1P04553 51 aa1.71□□□□□ -2.14
SRP54-210ENST00000556380 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
SRP54-210ENST00000556380 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 113.7 ms