RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 KRTAP10-7P60409 375 aaPredicted RBP3.37□□□□□ -1.87
NEK9-206ENST00000555537 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
NEK9-206ENST00000555537 KRTAP9-4Q9BYQ2 154 aa3.35□□□□□ -1.87
NEK9-206ENST00000555537 KRTAP10-12P60413 245 aa3.31□□□□□ -1.88
NEK9-206ENST00000555537 M0QZ58 72 aa3.3□□□□□ -1.88
NEK9-206ENST00000555537 LCE1DQ5T752 114 aa3.28□□□□□ -1.88
NEK9-206ENST00000555537 R4GN34 69 aa3.26□□□□□ -1.89
NEK9-206ENST00000555537 SPINT4Q6UDR6 99 aa3.25□□□□□ -1.89
NEK9-206ENST00000555537 P0C880 135 aa3.24□□□□□ -1.89
NEK9-206ENST00000555537 MT4P47944 62 aa3.22□□□□□ -1.89
NEK9-206ENST00000555537 LCE5AQ5TCM9 118 aa3.21□□□□□ -1.9
NEK9-206ENST00000555537 KRTAP4-7Q9BYR0 210 aa3.21□□□□□ -1.9
NEK9-206ENST00000555537 A0A0D9SG42 100 aa3.2□□□□□ -1.9
NEK9-206ENST00000555537 A0A0A0MQY5 61 aa3.19□□□□□ -1.9
NEK9-206ENST00000555537 KRTAP13-4Q3LI77 160 aa3.19□□□□□ -1.9
NEK9-206ENST00000555537 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
NEK9-206ENST00000555537 HMCN1Q96RW7 5635 aa3.18□□□□□ -1.9
NEK9-206ENST00000555537 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
NEK9-206ENST00000555537 KRTAP12-1P59990 96 aa3.17□□□□□ -1.9
NEK9-206ENST00000555537 KRTAP15-1Q3LI76 137 aa3.16□□□□□ -1.9
NEK9-206ENST00000555537 KRTAP19-3Q7Z4W3 81 aa3.16□□□□□ -1.9
NEK9-206ENST00000555537 KRTAP19-7Q3SYF9 63 aa3.15□□□□□ -1.91
NEK9-206ENST00000555537 LCE4AQ5TA78 99 aa3.14□□□□□ -1.91
NEK9-206ENST00000555537 PP632Q6XCG6 107 aa3.14□□□□□ -1.91
NEK9-206ENST00000555537 MT1EP04732 61 aa3.13□□□□□ -1.91
NEK9-206ENST00000555537 KRTAP5-7Q6L8G8 165 aa3.09□□□□□ -1.91
NEK9-206ENST00000555537 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
NEK9-206ENST00000555537 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
NEK9-206ENST00000555537 C10orf95Q9H7T3 257 aa3.07□□□□□ -1.92
NEK9-206ENST00000555537 KRTAP5-3Q6L8H2 238 aa3.05□□□□□ -1.92
NEK9-206ENST00000555537 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
NEK9-206ENST00000555537 KRTAP23-1A1A580 65 aa3.04□□□□□ -1.92
NEK9-206ENST00000555537 MT1GP13640 62 aa3.04□□□□□ -1.92
NEK9-206ENST00000555537 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.92
NEK9-206ENST00000555537 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
NEK9-206ENST00000555537 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
NEK9-206ENST00000555537 MT1MQ8N339 61 aa3□□□□□ -1.93
NEK9-206ENST00000555537 KRTAP4-11Q9BYQ6 195 aa3□□□□□ -1.93
NEK9-206ENST00000555537 KRTAP19-5Q3LI72 72 aa2.99□□□□□ -1.93
NEK9-206ENST00000555537 CAMK2N1Q7Z7J9 78 aa2.96□□□□□ -1.94
NEK9-206ENST00000555537 TNP1P09430 55 aa2.93□□□□□ -1.94
NEK9-206ENST00000555537 MT1LQ93083 61 aa2.93□□□□□ -1.94
NEK9-206ENST00000555537 KRTAP19-4Q3LI73 84 aa2.91□□□□□ -1.94
NEK9-206ENST00000555537 KRTAP20-2Q3LI61 65 aa2.9□□□□□ -1.95
NEK9-206ENST00000555537 KRTAP12-4P60329 112 aa2.77□□□□□ -1.97
NEK9-206ENST00000555537 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
NEK9-206ENST00000555537 LCE3AQ5TA76 89 aa2.76□□□□□ -1.97
NEK9-206ENST00000555537 SYNE1Q8NF91 8797 aaKnown RBP2.75□□□□□ -1.97
NEK9-206ENST00000555537 INE1O15225 51 aa2.72□□□□□ -1.97
NEK9-206ENST00000555537 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
NEK9-206ENST00000555537 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
NEK9-206ENST00000555537 AHNAKQ09666 5890 aaKnown RBP2.65□□□□□ -1.98
NEK9-206ENST00000555537 KRTAP12-3P60328 96 aa2.63□□□□□ -1.99
NEK9-206ENST00000555537 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
NEK9-206ENST00000555537 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
NEK9-206ENST00000555537 OBSCNQ5VST9 7968 aa2.53□□□□□ -2
NEK9-206ENST00000555537 KRTAP6-1Q3LI64 71 aa2.52□□□□□ -2.01
NEK9-206ENST00000555537 MT1AP04731 61 aa2.47□□□□□ -2.01
NEK9-206ENST00000555537 KRTAP6-2Q3LI66 62 aa2.47□□□□□ -2.01
NEK9-206ENST00000555537 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
NEK9-206ENST00000555537 LCE3CQ5T5A8 94 aa2.4□□□□□ -2.03
NEK9-206ENST00000555537 KRTAP9-6A8MVA2 160 aa2.31□□□□□ -2.04
NEK9-206ENST00000555537 MT3P25713 68 aa2.28□□□□□ -2.04
NEK9-206ENST00000555537 LCE1EQ5T753 118 aa2.15□□□□□ -2.07
NEK9-206ENST00000555537 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
NEK9-206ENST00000555537 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
NEK9-206ENST00000555537 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
NEK9-206ENST00000555537 LCE1CQ5T751 118 aa2□□□□□ -2.09
NEK9-206ENST00000555537 PHGR1C9JFL3 82 aa1.88□□□□□ -2.11
NEK9-206ENST00000555537 LCE3EQ5T5B0 92 aa1.88□□□□□ -2.11
NEK9-206ENST00000555537 LCE3DQ9BYE3 92 aa1.87□□□□□ -2.11
NEK9-206ENST00000555537 LCE1FQ5T754 118 aa1.85□□□□□ -2.11
NEK9-206ENST00000555537 PRM1P04553 51 aa1.74□□□□□ -2.13
NEK9-206ENST00000555537 KRTAP4-4Q9BYR3 166 aa1.74□□□□□ -2.13
NEK9-206ENST00000555537 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
NEK9-206ENST00000555537 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
NEK9-206ENST00000555537 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
NEK9-206ENST00000555537 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 7.8 ms