RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
RDH11-207ENST00000554731 MT4P47944 62 aa4.51□□□□□ -1.69
RDH11-207ENST00000554731 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
RDH11-207ENST00000554731 HMCN1Q96RW7 5635 aa4.5□□□□□ -1.69
RDH11-207ENST00000554731 SMIM26A0A096LP01 95 aa4.48□□□□□ -1.69
RDH11-207ENST00000554731 MT1MQ8N339 61 aa4.46□□□□□ -1.7
RDH11-207ENST00000554731 AHNAK2Q8IVF2 5795 aa4.44□□□□□ -1.7
RDH11-207ENST00000554731 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
RDH11-207ENST00000554731 SPINT4Q6UDR6 99 aa4.42□□□□□ -1.7
RDH11-207ENST00000554731 MT1LQ93083 61 aa4.42□□□□□ -1.7
RDH11-207ENST00000554731 SEC61GP60059 68 aa4.41□□□□□ -1.7
RDH11-207ENST00000554731 Q1T7F1 81 aa4.41□□□□□ -1.7
RDH11-207ENST00000554731 V9GYY9 64 aa4.4□□□□□ -1.71
RDH11-207ENST00000554731 KRTAP5-10Q6L8G5 202 aa4.39□□□□□ -1.71
RDH11-207ENST00000554731 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
RDH11-207ENST00000554731 SPATA8Q6RVD6 105 aa4.39□□□□□ -1.71
RDH11-207ENST00000554731 LINC01558Q9Y6Z2 57 aa4.38□□□□□ -1.71
RDH11-207ENST00000554731 KRTAP12-1P59990 96 aa4.36□□□□□ -1.71
RDH11-207ENST00000554731 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
RDH11-207ENST00000554731 A0A1B0GU33 70 aa4.34□□□□□ -1.71
RDH11-207ENST00000554731 C10orf95Q9H7T3 257 aa4.31□□□□□ -1.72
RDH11-207ENST00000554731 PRR15LQ9BU68 103 aa4.3□□□□□ -1.72
RDH11-207ENST00000554731 A0A1B0GU69 56 aa4.29□□□□□ -1.72
RDH11-207ENST00000554731 LCE3AQ5TA76 89 aa4.29□□□□□ -1.72
RDH11-207ENST00000554731 PSPHP1O15172 72 aa4.27□□□□□ -1.73
RDH11-207ENST00000554731 KRTAP5-7Q6L8G8 165 aa4.26□□□□□ -1.73
RDH11-207ENST00000554731 TNP1P09430 55 aa4.24□□□□□ -1.73
RDH11-207ENST00000554731 A8MU10 97 aa4.18□□□□□ -1.74
RDH11-207ENST00000554731 UQCR11O14957 56 aa4.17□□□□□ -1.74
RDH11-207ENST00000554731 KRTAP20-2Q3LI61 65 aa4.17□□□□□ -1.74
RDH11-207ENST00000554731 A6NED7 52 aa4.16□□□□□ -1.74
RDH11-207ENST00000554731 KRTAP15-1Q3LI76 137 aa4.14□□□□□ -1.75
RDH11-207ENST00000554731 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
RDH11-207ENST00000554731 SPRR5A0A1B0GTR4 108 aa4.12□□□□□ -1.75
RDH11-207ENST00000554731 MIR22HGQ0VDD5 57 aa4.11□□□□□ -1.75
RDH11-207ENST00000554731 CDC42SE1Q9NRR8 79 aa4.11□□□□□ -1.75
RDH11-207ENST00000554731 KRTAP5-5Q701N2 237 aaPredicted RBP4.1□□□□□ -1.75
RDH11-207ENST00000554731 KRTAP12-4P60329 112 aa4.09□□□□□ -1.75
RDH11-207ENST00000554731 BRK1Q8WUW1 75 aa4.07□□□□□ -1.76
RDH11-207ENST00000554731 PRO0628Q9UI54 55 aa4.01□□□□□ -1.77
RDH11-207ENST00000554731 K7ERS5 55 aa3.94□□□□□ -1.78
RDH11-207ENST00000554731 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
RDH11-207ENST00000554731 KRTAP25-1Q3LHN0 102 aa3.88□□□□□ -1.79
RDH11-207ENST00000554731 PMAIP1Q13794 54 aa3.86□□□□□ -1.79
RDH11-207ENST00000554731 KRTAP5-2Q701N4 177 aa3.8□□□□□ -1.8
RDH11-207ENST00000554731 ROMO1P60602 79 aa3.78□□□□□ -1.8
RDH11-207ENST00000554731 LCE3CQ5T5A8 94 aa3.77□□□□□ -1.81
RDH11-207ENST00000554731 MT1AP04731 61 aa3.76□□□□□ -1.81
RDH11-207ENST00000554731 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
RDH11-207ENST00000554731 KRTAP5-8O75690 187 aa3.74□□□□□ -1.81
RDH11-207ENST00000554731 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
RDH11-207ENST00000554731 KTN1-AS1Q86SY8 53 aa3.71□□□□□ -1.82
RDH11-207ENST00000554731 MUC5ACP98088 5654 aa3.7□□□□□ -1.82
RDH11-207ENST00000554731 MUC5BQ9HC84 5762 aaPredicted RBP3.69□□□□□ -1.82
RDH11-207ENST00000554731 KRTAP6-2Q3LI66 62 aa3.63□□□□□ -1.83
RDH11-207ENST00000554731 PRAC1Q96KF2 57 aa3.63□□□□□ -1.83
RDH11-207ENST00000554731 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
RDH11-207ENST00000554731 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
RDH11-207ENST00000554731 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
RDH11-207ENST00000554731 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
RDH11-207ENST00000554731 MT3P25713 68 aa3.46□□□□□ -1.86
RDH11-207ENST00000554731 KRTAP5-1Q6L8H4 278 aa3.45□□□□□ -1.86
RDH11-207ENST00000554731 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
RDH11-207ENST00000554731 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
RDH11-207ENST00000554731 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
RDH11-207ENST00000554731 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
RDH11-207ENST00000554731 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
RDH11-207ENST00000554731 LUZP6Q538Z0 58 aa2.97□□□□□ -1.93
RDH11-207ENST00000554731 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
RDH11-207ENST00000554731 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
RDH11-207ENST00000554731 PHGR1C9JFL3 82 aa2.58□□□□□ -2
RDH11-207ENST00000554731 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
RDH11-207ENST00000554731 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
RDH11-207ENST00000554731 INE1O15225 51 aa2.4□□□□□ -2.03
RDH11-207ENST00000554731 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
RDH11-207ENST00000554731 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
RDH11-207ENST00000554731 PRM1P04553 51 aa1.94□□□□□ -2.1
RDH11-207ENST00000554731 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 115.7 ms