RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 RPL37P61927 97 aaKnown RBP2.49□□□□□ -2.01
MTHFD1-206ENST00000554353 FLGP20930 4061 aaPredicted RBP2.48□□□□□ -2.01
MTHFD1-206ENST00000554353 KRTAP4-1Q9BYQ7 146 aa2.47□□□□□ -2.01
MTHFD1-206ENST00000554353 H0YAA0 97 aa2.45□□□□□ -2.02
MTHFD1-206ENST00000554353 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
MTHFD1-206ENST00000554353 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
MTHFD1-206ENST00000554353 H1FX-AS1Q4G0G2 97 aa2.43□□□□□ -2.02
MTHFD1-206ENST00000554353 CRCT1Q9UGL9 99 aa2.43□□□□□ -2.02
MTHFD1-206ENST00000554353 FSIP2Q5CZC0 6907 aa2.42□□□□□ -2.02
MTHFD1-206ENST00000554353 MT1HP80294 61 aa2.4□□□□□ -2.03
MTHFD1-206ENST00000554353 KRTAP19-2Q3LHN2 52 aa2.4□□□□□ -2.03
MTHFD1-206ENST00000554353 S4R3F8 94 aa2.39□□□□□ -2.03
MTHFD1-206ENST00000554353 KRTAP13-4Q3LI77 160 aa2.38□□□□□ -2.03
MTHFD1-206ENST00000554353 PLAC4Q8WY50 150 aa2.37□□□□□ -2.03
MTHFD1-206ENST00000554353 M0R2T5 61 aa2.35□□□□□ -2.03
MTHFD1-206ENST00000554353 SSPOA2VEC9 5147 aa2.33□□□□□ -2.04
MTHFD1-206ENST00000554353 USH2AO75445 5202 aa2.31□□□□□ -2.04
MTHFD1-206ENST00000554353 A0A0D9SG42 100 aa2.29□□□□□ -2.04
MTHFD1-206ENST00000554353 KRTAP12-1P59990 96 aa2.28□□□□□ -2.04
MTHFD1-206ENST00000554353 M0QZ58 72 aa2.26□□□□□ -2.05
MTHFD1-206ENST00000554353 CRIPTQ9P021 101 aa2.25□□□□□ -2.05
MTHFD1-206ENST00000554353 FCGBPQ9Y6R7 5405 aaPredicted RBP2.24□□□□□ -2.05
MTHFD1-206ENST00000554353 MT2AP02795 61 aa2.21□□□□□ -2.06
MTHFD1-206ENST00000554353 MT1FP04733 61 aa2.19□□□□□ -2.06
MTHFD1-206ENST00000554353 C10orf95Q9H7T3 257 aa2.19□□□□□ -2.06
MTHFD1-206ENST00000554353 KRTAP19-6Q3LI70 58 aa2.13□□□□□ -2.07
MTHFD1-206ENST00000554353 MACF1Q9UPN3 7388 aaKnown RBP2.11□□□□□ -2.07
MTHFD1-206ENST00000554353 MUC12Q9UKN1 5478 aa2.1□□□□□ -2.07
MTHFD1-206ENST00000554353 SYNE2Q8WXH0 6885 aaKnown RBP2.1□□□□□ -2.07
MTHFD1-206ENST00000554353 HMCN1Q96RW7 5635 aa2.08□□□□□ -2.08
MTHFD1-206ENST00000554353 KRTAP6-3Q3LI67 103 aa2.08□□□□□ -2.08
MTHFD1-206ENST00000554353 SPRR2GQ9BYE4 73 aa2.08□□□□□ -2.08
MTHFD1-206ENST00000554353 KRTAP12-3P60328 96 aa2.07□□□□□ -2.08
MTHFD1-206ENST00000554353 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
MTHFD1-206ENST00000554353 KRTAP19-8Q3LI54 63 aa2.01□□□□□ -2.09
MTHFD1-206ENST00000554353 MDN1Q9NU22 5596 aa2□□□□□ -2.09
MTHFD1-206ENST00000554353 TNP1P09430 55 aa2□□□□□ -2.09
MTHFD1-206ENST00000554353 KMT2DO14686 5537 aa1.98□□□□□ -2.09
MTHFD1-206ENST00000554353 MT1BP07438 61 aa1.98□□□□□ -2.09
MTHFD1-206ENST00000554353 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
MTHFD1-206ENST00000554353 KRTAP20-1Q3LI63 56 aa1.97□□□□□ -2.09
MTHFD1-206ENST00000554353 NEBP20929 6669 aa1.96□□□□□ -2.1
MTHFD1-206ENST00000554353 KRTAP12-4P60329 112 aa1.94□□□□□ -2.1
MTHFD1-206ENST00000554353 MT1XP80297 61 aa1.94□□□□□ -2.1
MTHFD1-206ENST00000554353 KRTAP2-3P0C7H8 128 aa1.9□□□□□ -2.11
MTHFD1-206ENST00000554353 KRTAP8-1Q8IUC2 63 aa1.9□□□□□ -2.11
MTHFD1-206ENST00000554353 KRTAP2-4Q9BYR9 128 aa1.9□□□□□ -2.11
MTHFD1-206ENST00000554353 SPRR2FQ96RM1 72 aa1.89□□□□□ -2.11
MTHFD1-206ENST00000554353 SPRR2EP22531 72 aa1.87□□□□□ -2.11
MTHFD1-206ENST00000554353 SPRR2BP35325 72 aa1.87□□□□□ -2.11
MTHFD1-206ENST00000554353 SPRR2AP35326 72 aa1.87□□□□□ -2.11
MTHFD1-206ENST00000554353 KRTAP2-1Q9BYU5 128 aa1.84□□□□□ -2.11
MTHFD1-206ENST00000554353 SPRR2DP22532 72 aa1.81□□□□□ -2.12
MTHFD1-206ENST00000554353 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
MTHFD1-206ENST00000554353 KRTAP19-5Q3LI72 72 aa1.78□□□□□ -2.12
MTHFD1-206ENST00000554353 KRTAP19-7Q3SYF9 63 aa1.74□□□□□ -2.13
MTHFD1-206ENST00000554353 MT1EP04732 61 aa1.68□□□□□ -2.14
MTHFD1-206ENST00000554353 MT1LQ93083 61 aa1.68□□□□□ -2.14
MTHFD1-206ENST00000554353 GPR98Q8WXG9 6306 aa1.67□□□□□ -2.14
MTHFD1-206ENST00000554353 KRTAP19-3Q7Z4W3 81 aa1.64□□□□□ -2.15
MTHFD1-206ENST00000554353 DSTQ03001 7570 aaKnown RBP1.64□□□□□ -2.15
MTHFD1-206ENST00000554353 AHNAK2Q8IVF2 5795 aa1.61□□□□□ -2.15
MTHFD1-206ENST00000554353 MT1GP13640 62 aa1.6□□□□□ -2.15
MTHFD1-206ENST00000554353 MT4P47944 62 aa1.6□□□□□ -2.15
MTHFD1-206ENST00000554353 MT1MQ8N339 61 aa1.58□□□□□ -2.16
MTHFD1-206ENST00000554353 KRTAP5-10Q6L8G5 202 aa1.55□□□□□ -2.16
MTHFD1-206ENST00000554353 KRTAP20-2Q3LI61 65 aa1.46□□□□□ -2.18
MTHFD1-206ENST00000554353 SYNE1Q8NF91 8797 aaKnown RBP1.46□□□□□ -2.18
MTHFD1-206ENST00000554353 MT1AP04731 61 aa1.42□□□□□ -2.18
MTHFD1-206ENST00000554353 KRTAP6-1Q3LI64 71 aa1.42□□□□□ -2.18
MTHFD1-206ENST00000554353 MUC5BQ9HC84 5762 aaPredicted RBP1.35□□□□□ -2.19
MTHFD1-206ENST00000554353 AHNAKQ09666 5890 aaKnown RBP1.3□□□□□ -2.2
MTHFD1-206ENST00000554353 MUC5ACP98088 5654 aa1.3□□□□□ -2.2
MTHFD1-206ENST00000554353 KRTAP6-2Q3LI66 62 aa1.29□□□□□ -2.2
MTHFD1-206ENST00000554353 PRM1P04553 51 aa1.21□□□□□ -2.22
MTHFD1-206ENST00000554353 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
MTHFD1-206ENST00000554353 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
MTHFD1-206ENST00000554353 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 146 ms