RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 KRTAP10-7P60409 375 aaPredicted RBP6.63□□□□□ -1.35
NEK9-204ENST00000554258 MIR22HGQ0VDD5 57 aa6.63□□□□□ -1.35
NEK9-204ENST00000554258 SPINT4Q6UDR6 99 aa6.63□□□□□ -1.35
NEK9-204ENST00000554258 KRTAP10-12P60413 245 aa6.59□□□□□ -1.35
NEK9-204ENST00000554258 CAMK2N1Q7Z7J9 78 aa6.59□□□□□ -1.35
NEK9-204ENST00000554258 KRTAP5-3Q6L8H2 238 aa6.58□□□□□ -1.36
NEK9-204ENST00000554258 SVIPQ8NHG7 77 aa6.56□□□□□ -1.36
NEK9-204ENST00000554258 LCE5AQ5TCM9 118 aa6.55□□□□□ -1.36
NEK9-204ENST00000554258 A6NED7 52 aa6.52□□□□□ -1.37
NEK9-204ENST00000554258 KRTAP4-12Q9BQ66 201 aa6.52□□□□□ -1.37
NEK9-204ENST00000554258 KRTAP19-3Q7Z4W3 81 aa6.4□□□□□ -1.38
NEK9-204ENST00000554258 CDC42SE1Q9NRR8 79 aa6.39□□□□□ -1.39
NEK9-204ENST00000554258 K7ERS5 55 aa6.38□□□□□ -1.39
NEK9-204ENST00000554258 C10orf95Q9H7T3 257 aa6.38□□□□□ -1.39
NEK9-204ENST00000554258 KRTAP5-4Q6L8H1 288 aa6.32□□□□□ -1.4
NEK9-204ENST00000554258 KRTAP9-9Q9BYP9 154 aa6.31□□□□□ -1.4
NEK9-204ENST00000554258 KRTAP9-4Q9BYQ2 154 aa6.31□□□□□ -1.4
NEK9-204ENST00000554258 AHNAKQ09666 5890 aaKnown RBP6.26□□□□□ -1.41
NEK9-204ENST00000554258 MT1EP04732 61 aa6.24□□□□□ -1.41
NEK9-204ENST00000554258 TNP1P09430 55 aa6.24□□□□□ -1.41
NEK9-204ENST00000554258 KRTAP19-7Q3SYF9 63 aa6.23□□□□□ -1.41
NEK9-204ENST00000554258 H3BS24 57 aa6.19□□□□□ -1.42
NEK9-204ENST00000554258 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
NEK9-204ENST00000554258 MT1GP13640 62 aa6.13□□□□□ -1.43
NEK9-204ENST00000554258 PP632Q6XCG6 107 aa6.11□□□□□ -1.43
NEK9-204ENST00000554258 BRK1Q8WUW1 75 aa6.1□□□□□ -1.43
NEK9-204ENST00000554258 MUC5ACP98088 5654 aa6.1□□□□□ -1.43
NEK9-204ENST00000554258 ROMO1P60602 79 aa6.08□□□□□ -1.44
NEK9-204ENST00000554258 LCE3AQ5TA76 89 aa6.07□□□□□ -1.44
NEK9-204ENST00000554258 KRTAP20-2Q3LI61 65 aa6.06□□□□□ -1.44
NEK9-204ENST00000554258 MUC5BQ9HC84 5762 aaPredicted RBP6.02□□□□□ -1.45
NEK9-204ENST00000554258 MT1MQ8N339 61 aa6.01□□□□□ -1.45
NEK9-204ENST00000554258 KRTAP23-1A1A580 65 aa5.99□□□□□ -1.45
NEK9-204ENST00000554258 KRTAP19-5Q3LI72 72 aa5.99□□□□□ -1.45
NEK9-204ENST00000554258 KRTAP4-3Q9BYR4 195 aa5.94□□□□□ -1.46
NEK9-204ENST00000554258 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
NEK9-204ENST00000554258 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
NEK9-204ENST00000554258 KRTAP12-3P60328 96 aa5.85□□□□□ -1.47
NEK9-204ENST00000554258 PMAIP1Q13794 54 aa5.79□□□□□ -1.48
NEK9-204ENST00000554258 KRTAP4-11Q9BYQ6 195 aa5.79□□□□□ -1.48
NEK9-204ENST00000554258 PRO0628Q9UI54 55 aa5.79□□□□□ -1.48
NEK9-204ENST00000554258 MT1LQ93083 61 aa5.78□□□□□ -1.48
NEK9-204ENST00000554258 KRTAP12-4P60329 112 aa5.75□□□□□ -1.49
NEK9-204ENST00000554258 KRTAP5-8O75690 187 aa5.69□□□□□ -1.5
NEK9-204ENST00000554258 KRTAP4-2Q9BYR5 136 aa5.68□□□□□ -1.5
NEK9-204ENST00000554258 KRTAP15-1Q3LI76 137 aa5.63□□□□□ -1.51
NEK9-204ENST00000554258 SYNE1Q8NF91 8797 aaKnown RBP5.62□□□□□ -1.51
NEK9-204ENST00000554258 KRTAP5-5Q701N2 237 aaPredicted RBP5.59□□□□□ -1.51
NEK9-204ENST00000554258 OBSCNQ5VST9 7968 aa5.48□□□□□ -1.53
NEK9-204ENST00000554258 PRAC1Q96KF2 57 aa5.46□□□□□ -1.54
NEK9-204ENST00000554258 LCE3CQ5T5A8 94 aa5.44□□□□□ -1.54
NEK9-204ENST00000554258 KTN1-AS1Q86SY8 53 aa5.41□□□□□ -1.54
NEK9-204ENST00000554258 KRTAP5-2Q701N4 177 aa5.36□□□□□ -1.55
NEK9-204ENST00000554258 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.59
NEK9-204ENST00000554258 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
NEK9-204ENST00000554258 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
NEK9-204ENST00000554258 KRTAP6-2Q3LI66 62 aa4.94□□□□□ -1.62
NEK9-204ENST00000554258 MT1AP04731 61 aa4.93□□□□□ -1.62
NEK9-204ENST00000554258 A0A0A0MQY5 61 aa4.8□□□□□ -1.64
NEK9-204ENST00000554258 MT3P25713 68 aa4.54□□□□□ -1.68
NEK9-204ENST00000554258 LUZP6Q538Z0 58 aa4.5□□□□□ -1.69
NEK9-204ENST00000554258 LCE1EQ5T753 118 aa4.4□□□□□ -1.71
NEK9-204ENST00000554258 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
NEK9-204ENST00000554258 PHGR1C9JFL3 82 aa4.15□□□□□ -1.75
NEK9-204ENST00000554258 LCE1CQ5T751 118 aa4.09□□□□□ -1.75
NEK9-204ENST00000554258 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
NEK9-204ENST00000554258 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
NEK9-204ENST00000554258 LCE3DQ9BYE3 92 aa4□□□□□ -1.77
NEK9-204ENST00000554258 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
NEK9-204ENST00000554258 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.79
NEK9-204ENST00000554258 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
NEK9-204ENST00000554258 MUC19Q7Z5P9 8384 aa3.43□□□□□ -1.86
NEK9-204ENST00000554258 INE1O15225 51 aa3.39□□□□□ -1.87
NEK9-204ENST00000554258 KRTAP21-2Q3LI59 83 aa3.26□□□□□ -1.89
NEK9-204ENST00000554258 KRTAP4-4Q9BYR3 166 aa3.19□□□□□ -1.9
NEK9-204ENST00000554258 KRTAP21-1Q3LI58 79 aa3.15□□□□□ -1.91
NEK9-204ENST00000554258 PRM1P04553 51 aa3.12□□□□□ -1.91
NEK9-204ENST00000554258 MUC16Q8WXI7 14507 aa2.36□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 182 ms