RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 RPS28P62857 69 aaKnown RBP8.47□□□□□ -1.05
NEK9-203ENST00000553945 A6NED7 52 aa8.42□□□□□ -1.06
NEK9-203ENST00000553945 MT1GP13640 62 aa8.34□□□□□ -1.07
NEK9-203ENST00000553945 KRTAP25-1Q3LHN0 102 aa8.31□□□□□ -1.08
NEK9-203ENST00000553945 MT1LQ93083 61 aa8.29□□□□□ -1.08
NEK9-203ENST00000553945 PP632Q6XCG6 107 aa8.28□□□□□ -1.08
NEK9-203ENST00000553945 DSTQ03001 7570 aaKnown RBP8.27□□□□□ -1.09
NEK9-203ENST00000553945 KRTAP12-3P60328 96 aa8.21□□□□□ -1.1
NEK9-203ENST00000553945 MT1MQ8N339 61 aa8.21□□□□□ -1.1
NEK9-203ENST00000553945 CDC42SE1Q9NRR8 79 aa8.08□□□□□ -1.12
NEK9-203ENST00000553945 KRTAP4-3Q9BYR4 195 aa8.03□□□□□ -1.12
NEK9-203ENST00000553945 KRTAP23-1A1A580 65 aa7.98□□□□□ -1.13
NEK9-203ENST00000553945 ROMO1P60602 79 aa7.97□□□□□ -1.13
NEK9-203ENST00000553945 KRTAP4-7Q9BYR0 210 aa7.93□□□□□ -1.14
NEK9-203ENST00000553945 KRTAP4-9Q9BYQ8 210 aa7.85□□□□□ -1.15
NEK9-203ENST00000553945 KRTAP15-1Q3LI76 137 aa7.76□□□□□ -1.17
NEK9-203ENST00000553945 LCE4AQ5TA78 99 aa7.75□□□□□ -1.17
NEK9-203ENST00000553945 KRTAP19-4Q3LI73 84 aa7.71□□□□□ -1.18
NEK9-203ENST00000553945 LCE1DQ5T752 114 aa7.69□□□□□ -1.18
NEK9-203ENST00000553945 MT4P47944 62 aa7.66□□□□□ -1.18
NEK9-203ENST00000553945 KRTAP5-4Q6L8H1 288 aa7.64□□□□□ -1.19
NEK9-203ENST00000553945 HMCN1Q96RW7 5635 aa7.59□□□□□ -1.19
NEK9-203ENST00000553945 LCE3CQ5T5A8 94 aa7.58□□□□□ -1.2
NEK9-203ENST00000553945 BRK1Q8WUW1 75 aa7.52□□□□□ -1.21
NEK9-203ENST00000553945 LOC100996750A0A140TA64 210 aa7.49□□□□□ -1.21
NEK9-203ENST00000553945 KRTAP5-5Q701N2 237 aaPredicted RBP7.47□□□□□ -1.21
NEK9-203ENST00000553945 GPR98Q8WXG9 6306 aa7.46□□□□□ -1.21
NEK9-203ENST00000553945 KRTAP4-6Q9BYQ5 205 aa7.45□□□□□ -1.22
NEK9-203ENST00000553945 KRTAP12-4P60329 112 aa7.24□□□□□ -1.25
NEK9-203ENST00000553945 AHNAK2Q8IVF2 5795 aa7.22□□□□□ -1.25
NEK9-203ENST00000553945 KRTAP20-2Q3LI61 65 aa7.21□□□□□ -1.26
NEK9-203ENST00000553945 SPRR5A0A1B0GTR4 108 aa7.19□□□□□ -1.26
NEK9-203ENST00000553945 SYNE1Q8NF91 8797 aaKnown RBP7.14□□□□□ -1.27
NEK9-203ENST00000553945 KRTAP9-6A8MVA2 160 aa7.13□□□□□ -1.27
NEK9-203ENST00000553945 PMAIP1Q13794 54 aa7.07□□□□□ -1.28
NEK9-203ENST00000553945 MT1AP04731 61 aa7.06□□□□□ -1.28
NEK9-203ENST00000553945 KRTAP6-1Q3LI64 71 aa7.01□□□□□ -1.29
NEK9-203ENST00000553945 KRTAP5-10Q6L8G5 202 aa6.97□□□□□ -1.29
NEK9-203ENST00000553945 KRTAP5-3Q6L8H2 238 aa6.97□□□□□ -1.29
NEK9-203ENST00000553945 KRTAP9-4Q9BYQ2 154 aa6.81□□□□□ -1.32
NEK9-203ENST00000553945 PRAC1Q96KF2 57 aa6.77□□□□□ -1.33
NEK9-203ENST00000553945 KRTAP5-2Q701N4 177 aa6.74□□□□□ -1.33
NEK9-203ENST00000553945 PRO0628Q9UI54 55 aa6.72□□□□□ -1.33
NEK9-203ENST00000553945 KRTAP5-7Q6L8G8 165 aa6.67□□□□□ -1.34
NEK9-203ENST00000553945 KRTAP6-2Q3LI66 62 aa6.66□□□□□ -1.34
NEK9-203ENST00000553945 KRTAP4-11Q9BYQ6 195 aa6.51□□□□□ -1.37
NEK9-203ENST00000553945 MT3P25713 68 aa6.45□□□□□ -1.38
NEK9-203ENST00000553945 KTN1-AS1Q86SY8 53 aa6.39□□□□□ -1.39
NEK9-203ENST00000553945 OBSCNQ5VST9 7968 aa6.32□□□□□ -1.4
NEK9-203ENST00000553945 KRTAP5-8O75690 187 aa6.28□□□□□ -1.4
NEK9-203ENST00000553945 SVIPQ8NHG7 77 aa6.15□□□□□ -1.42
NEK9-203ENST00000553945 KRTAP5-1Q6L8H4 278 aa5.99□□□□□ -1.45
NEK9-203ENST00000553945 KRTAP9-9Q9BYP9 154 aa5.93□□□□□ -1.46
NEK9-203ENST00000553945 MUC5ACP98088 5654 aa5.9□□□□□ -1.47
NEK9-203ENST00000553945 MUC5BQ9HC84 5762 aaPredicted RBP5.88□□□□□ -1.47
NEK9-203ENST00000553945 AHNAKQ09666 5890 aaKnown RBP5.85□□□□□ -1.47
NEK9-203ENST00000553945 LCE1EQ5T753 118 aa5.84□□□□□ -1.47
NEK9-203ENST00000553945 LUZP6Q538Z0 58 aa5.68□□□□□ -1.5
NEK9-203ENST00000553945 LCE1BQ5T7P3 118 aa5.53□□□□□ -1.52
NEK9-203ENST00000553945 LCE3DQ9BYE3 92 aa5.53□□□□□ -1.52
NEK9-203ENST00000553945 KRTAP4-2Q9BYR5 136 aa5.49□□□□□ -1.53
NEK9-203ENST00000553945 LCE1CQ5T751 118 aa5.42□□□□□ -1.54
NEK9-203ENST00000553945 LCE3EQ5T5B0 92 aa5.24□□□□□ -1.57
NEK9-203ENST00000553945 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.95□□□□□ -1.62
NEK9-203ENST00000553945 KRTAP4-12Q9BQ66 201 aa4.92□□□□□ -1.62
NEK9-203ENST00000553945 KRTAP5-11Q6L8G4 156 aa4.88□□□□□ -1.63
NEK9-203ENST00000553945 NDUFAF8A1L188 74 aa4.77□□□□□ -1.65
NEK9-203ENST00000553945 LCE1FQ5T754 118 aa4.68□□□□□ -1.66
NEK9-203ENST00000553945 KRTAP21-2Q3LI59 83 aa4.6□□□□□ -1.67
NEK9-203ENST00000553945 H3BS24 57 aa4.26□□□□□ -1.73
NEK9-203ENST00000553945 KRTAP4-4Q9BYR3 166 aa4.22□□□□□ -1.73
NEK9-203ENST00000553945 PHGR1C9JFL3 82 aa4.21□□□□□ -1.74
NEK9-203ENST00000553945 PRM1P04553 51 aa4.1□□□□□ -1.75
NEK9-203ENST00000553945 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
NEK9-203ENST00000553945 MUC19Q7Z5P9 8384 aa3.85□□□□□ -1.79
NEK9-203ENST00000553945 INE1O15225 51 aa3.85□□□□□ -1.79
NEK9-203ENST00000553945 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
NEK9-203ENST00000553945 MUC16Q8WXI7 14507 aa2.71□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 58.1 ms