RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 KRTAP2-3P0C7H8 128 aa5.81□□□□□ -1.48
ABCD4-218ENST00000553486 SPRR2FQ96RM1 72 aa5.81□□□□□ -1.48
ABCD4-218ENST00000553486 KRTAP2-4Q9BYR9 128 aa5.81□□□□□ -1.48
ABCD4-218ENST00000553486 SPRR2EP22531 72 aa5.76□□□□□ -1.49
ABCD4-218ENST00000553486 SPRR2BP35325 72 aa5.76□□□□□ -1.49
ABCD4-218ENST00000553486 SPRR2AP35326 72 aa5.76□□□□□ -1.49
ABCD4-218ENST00000553486 KRTAP19-5Q3LI72 72 aa5.72□□□□□ -1.49
ABCD4-218ENST00000553486 KRTAP4-8A0A0G2JLE6 195 aa5.69□□□□□ -1.5
ABCD4-218ENST00000553486 H3BS24 57 aa5.69□□□□□ -1.5
ABCD4-218ENST00000553486 KRTAP4-8Q9BYQ9 185 aa5.69□□□□□ -1.5
ABCD4-218ENST00000553486 LCE1AQ5T7P2 110 aa5.68□□□□□ -1.5
ABCD4-218ENST00000553486 KRTAP2-2Q9BYT5 123 aa5.62□□□□□ -1.51
ABCD4-218ENST00000553486 KRTAP2-1Q9BYU5 128 aa5.62□□□□□ -1.51
ABCD4-218ENST00000553486 SPRR2DP22532 72 aa5.58□□□□□ -1.52
ABCD4-218ENST00000553486 KRTAP19-7Q3SYF9 63 aa5.55□□□□□ -1.52
ABCD4-218ENST00000553486 LCE3CQ5T5A8 94 aa5.51□□□□□ -1.53
ABCD4-218ENST00000553486 KRTAP19-4Q3LI73 84 aa5.48□□□□□ -1.53
ABCD4-218ENST00000553486 MT1EP04732 61 aa5.45□□□□□ -1.54
ABCD4-218ENST00000553486 LCE3BQ5TA77 95 aa5.44□□□□□ -1.54
ABCD4-218ENST00000553486 MT1LQ93083 61 aa5.39□□□□□ -1.55
ABCD4-218ENST00000553486 A0A0A0MQY5 61 aa5.28□□□□□ -1.56
ABCD4-218ENST00000553486 DSTQ03001 7570 aaKnown RBP5.27□□□□□ -1.57
ABCD4-218ENST00000553486 KRTAP4-7Q9BYR0 210 aa5.26□□□□□ -1.57
ABCD4-218ENST00000553486 KRTAP9-6A8MVA2 160 aa5.2□□□□□ -1.58
ABCD4-218ENST00000553486 LCE5AQ5TCM9 118 aa5.19□□□□□ -1.58
ABCD4-218ENST00000553486 GPR98Q8WXG9 6306 aa5.18□□□□□ -1.58
ABCD4-218ENST00000553486 KRTAP19-3Q7Z4W3 81 aa5.18□□□□□ -1.58
ABCD4-218ENST00000553486 MT1GP13640 62 aa5.17□□□□□ -1.58
ABCD4-218ENST00000553486 KRTAP4-9Q9BYQ8 210 aa5.12□□□□□ -1.59
ABCD4-218ENST00000553486 MT1MQ8N339 61 aa5.11□□□□□ -1.59
ABCD4-218ENST00000553486 KRTAP4-3Q9BYR4 195 aa5.03□□□□□ -1.6
ABCD4-218ENST00000553486 LCE1DQ5T752 114 aa4.99□□□□□ -1.61
ABCD4-218ENST00000553486 HMCN1Q96RW7 5635 aa4.97□□□□□ -1.61
ABCD4-218ENST00000553486 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
ABCD4-218ENST00000553486 LCE4AQ5TA78 99 aa4.91□□□□□ -1.62
ABCD4-218ENST00000553486 MT4P47944 62 aa4.9□□□□□ -1.63
ABCD4-218ENST00000553486 INE1O15225 51 aa4.88□□□□□ -1.63
ABCD4-218ENST00000553486 AHNAK2Q8IVF2 5795 aa4.81□□□□□ -1.64
ABCD4-218ENST00000553486 KRTAP5-4Q6L8H1 288 aa4.8□□□□□ -1.64
ABCD4-218ENST00000553486 KRTAP4-6Q9BYQ5 205 aa4.74□□□□□ -1.65
ABCD4-218ENST00000553486 KRTAP5-10Q6L8G5 202 aa4.74□□□□□ -1.65
ABCD4-218ENST00000553486 MT1AP04731 61 aa4.58□□□□□ -1.68
ABCD4-218ENST00000553486 KRTAP5-7Q6L8G8 165 aa4.58□□□□□ -1.68
ABCD4-218ENST00000553486 KRTAP5-3Q6L8H2 238 aa4.58□□□□□ -1.68
ABCD4-218ENST00000553486 KRTAP5-5Q701N2 237 aaPredicted RBP4.56□□□□□ -1.68
ABCD4-218ENST00000553486 KRTAP20-2Q3LI61 65 aa4.54□□□□□ -1.68
ABCD4-218ENST00000553486 KRTAP6-1Q3LI64 71 aa4.53□□□□□ -1.68
ABCD4-218ENST00000553486 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
ABCD4-218ENST00000553486 SYNE1Q8NF91 8797 aaKnown RBP4.36□□□□□ -1.71
ABCD4-218ENST00000553486 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
ABCD4-218ENST00000553486 KRTAP4-11Q9BYQ6 195 aa4.21□□□□□ -1.74
ABCD4-218ENST00000553486 LCE3DQ9BYE3 92 aa4.19□□□□□ -1.74
ABCD4-218ENST00000553486 KRTAP5-2Q701N4 177 aa4.17□□□□□ -1.74
ABCD4-218ENST00000553486 MT3P25713 68 aa4.14□□□□□ -1.75
ABCD4-218ENST00000553486 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
ABCD4-218ENST00000553486 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
ABCD4-218ENST00000553486 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
ABCD4-218ENST00000553486 OBSCNQ5VST9 7968 aa4.07□□□□□ -1.76
ABCD4-218ENST00000553486 MUC5BQ9HC84 5762 aaPredicted RBP4.02□□□□□ -1.77
ABCD4-218ENST00000553486 MUC5ACP98088 5654 aa4.01□□□□□ -1.77
ABCD4-218ENST00000553486 AHNAKQ09666 5890 aaKnown RBP3.98□□□□□ -1.77
ABCD4-218ENST00000553486 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
ABCD4-218ENST00000553486 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
ABCD4-218ENST00000553486 PRM1P04553 51 aa3.72□□□□□ -1.81
ABCD4-218ENST00000553486 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
ABCD4-218ENST00000553486 KRTAP4-2Q9BYR5 136 aa3.37□□□□□ -1.87
ABCD4-218ENST00000553486 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
ABCD4-218ENST00000553486 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
ABCD4-218ENST00000553486 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
ABCD4-218ENST00000553486 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
ABCD4-218ENST00000553486 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
ABCD4-218ENST00000553486 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
ABCD4-218ENST00000553486 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
ABCD4-218ENST00000553486 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
ABCD4-218ENST00000553486 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
ABCD4-218ENST00000553486 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
ABCD4-218ENST00000553486 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
ABCD4-218ENST00000553486 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 101.7 ms