RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 GPR98Q8WXG9 6306 aa4.44□□□□□ -1.7
TMEM116-218ENST00000552839 KRTAP4-9Q9BYQ8 210 aa4.4□□□□□ -1.71
TMEM116-218ENST00000552839 KRTAP25-1Q3LHN0 102 aa4.39□□□□□ -1.71
TMEM116-218ENST00000552839 ROMO1P60602 79 aa4.38□□□□□ -1.71
TMEM116-218ENST00000552839 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
TMEM116-218ENST00000552839 H3BS24 57 aa4.31□□□□□ -1.72
TMEM116-218ENST00000552839 LCE3AQ5TA76 89 aa4.29□□□□□ -1.72
TMEM116-218ENST00000552839 KRTAP4-12Q9BQ66 201 aa4.28□□□□□ -1.72
TMEM116-218ENST00000552839 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
TMEM116-218ENST00000552839 LCE5AQ5TCM9 118 aa4.24□□□□□ -1.73
TMEM116-218ENST00000552839 PMAIP1Q13794 54 aa4.23□□□□□ -1.73
TMEM116-218ENST00000552839 KRTAP19-5Q3LI72 72 aa4.21□□□□□ -1.74
TMEM116-218ENST00000552839 PRO0628Q9UI54 55 aa4.19□□□□□ -1.74
TMEM116-218ENST00000552839 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
TMEM116-218ENST00000552839 PP632Q6XCG6 107 aa4.18□□□□□ -1.74
TMEM116-218ENST00000552839 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
TMEM116-218ENST00000552839 KRTAP19-3Q7Z4W3 81 aa4.17□□□□□ -1.74
TMEM116-218ENST00000552839 MT1EP04732 61 aa4.15□□□□□ -1.75
TMEM116-218ENST00000552839 MT4P47944 62 aa4.15□□□□□ -1.75
TMEM116-218ENST00000552839 KRTAP12-3P60328 96 aa4.15□□□□□ -1.75
TMEM116-218ENST00000552839 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
TMEM116-218ENST00000552839 KRTAP5-10Q6L8G5 202 aa4.13□□□□□ -1.75
TMEM116-218ENST00000552839 HMCN1Q96RW7 5635 aa4.13□□□□□ -1.75
TMEM116-218ENST00000552839 AHNAK2Q8IVF2 5795 aa4.11□□□□□ -1.75
TMEM116-218ENST00000552839 KRTAP9-9Q9BYP9 154 aa4.09□□□□□ -1.75
TMEM116-218ENST00000552839 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.75
TMEM116-218ENST00000552839 MT1LQ93083 61 aa4.03□□□□□ -1.76
TMEM116-218ENST00000552839 MT1GP13640 62 aa4.02□□□□□ -1.77
TMEM116-218ENST00000552839 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
TMEM116-218ENST00000552839 KRTAP5-7Q6L8G8 165 aa4.02□□□□□ -1.77
TMEM116-218ENST00000552839 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
TMEM116-218ENST00000552839 KRTAP15-1Q3LI76 137 aa3.98□□□□□ -1.77
TMEM116-218ENST00000552839 MT1MQ8N339 61 aa3.96□□□□□ -1.78
TMEM116-218ENST00000552839 PRAC1Q96KF2 57 aa3.96□□□□□ -1.78
TMEM116-218ENST00000552839 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
TMEM116-218ENST00000552839 KTN1-AS1Q86SY8 53 aa3.95□□□□□ -1.78
TMEM116-218ENST00000552839 KRTAP4-3Q9BYR4 195 aa3.9□□□□□ -1.79
TMEM116-218ENST00000552839 SPRR5A0A1B0GTR4 108 aa3.86□□□□□ -1.79
TMEM116-218ENST00000552839 SVIPQ8NHG7 77 aa3.86□□□□□ -1.79
TMEM116-218ENST00000552839 KRTAP4-7Q9BYR0 210 aa3.85□□□□□ -1.79
TMEM116-218ENST00000552839 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
TMEM116-218ENST00000552839 KRTAP20-2Q3LI61 65 aa3.8□□□□□ -1.8
TMEM116-218ENST00000552839 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
TMEM116-218ENST00000552839 KRTAP4-2Q9BYR5 136 aa3.68□□□□□ -1.82
TMEM116-218ENST00000552839 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
TMEM116-218ENST00000552839 KRTAP12-4P60329 112 aa3.64□□□□□ -1.83
TMEM116-218ENST00000552839 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
TMEM116-218ENST00000552839 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
TMEM116-218ENST00000552839 KRTAP5-8O75690 187 aa3.46□□□□□ -1.86
TMEM116-218ENST00000552839 MT1AP04731 61 aa3.45□□□□□ -1.86
TMEM116-218ENST00000552839 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
TMEM116-218ENST00000552839 KRTAP5-2Q701N4 177 aa3.43□□□□□ -1.86
TMEM116-218ENST00000552839 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
TMEM116-218ENST00000552839 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
TMEM116-218ENST00000552839 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.87
TMEM116-218ENST00000552839 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
TMEM116-218ENST00000552839 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
TMEM116-218ENST00000552839 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
TMEM116-218ENST00000552839 MT3P25713 68 aa3.17□□□□□ -1.9
TMEM116-218ENST00000552839 KRTAP5-1Q6L8H4 278 aa3.16□□□□□ -1.9
TMEM116-218ENST00000552839 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
TMEM116-218ENST00000552839 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
TMEM116-218ENST00000552839 LCE3DQ9BYE3 92 aa2.85□□□□□ -1.95
TMEM116-218ENST00000552839 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
TMEM116-218ENST00000552839 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
TMEM116-218ENST00000552839 A0A0A0MQY5 61 aa2.66□□□□□ -1.98
TMEM116-218ENST00000552839 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
TMEM116-218ENST00000552839 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
TMEM116-218ENST00000552839 INE1O15225 51 aa2.49□□□□□ -2.01
TMEM116-218ENST00000552839 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
TMEM116-218ENST00000552839 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
TMEM116-218ENST00000552839 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
TMEM116-218ENST00000552839 PRM1P04553 51 aa2.25□□□□□ -2.05
TMEM116-218ENST00000552839 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
TMEM116-218ENST00000552839 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
TMEM116-218ENST00000552839 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.09
TMEM116-218ENST00000552839 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
TMEM116-218ENST00000552839 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 81.4 ms