RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 SPATA8Q6RVD6 105 aa4.75□□□□□ -1.65
SUPT16H-202ENST00000552829 CRIPTQ9P021 101 aa4.75□□□□□ -1.65
SUPT16H-202ENST00000552829 MT3P25713 68 aa4.73□□□□□ -1.65
SUPT16H-202ENST00000552829 MIR22HGQ0VDD5 57 aa4.73□□□□□ -1.65
SUPT16H-202ENST00000552829 BRK1Q8WUW1 75 aa4.73□□□□□ -1.65
SUPT16H-202ENST00000552829 PRO2289Q9P1D8 64 aa4.72□□□□□ -1.65
SUPT16H-202ENST00000552829 A8MU10 97 aa4.71□□□□□ -1.66
SUPT16H-202ENST00000552829 M0QZ58 72 aa4.71□□□□□ -1.66
SUPT16H-202ENST00000552829 DSTQ03001 7570 aaKnown RBP4.7□□□□□ -1.66
SUPT16H-202ENST00000552829 CDC42SE1Q9NRR8 79 aa4.69□□□□□ -1.66
SUPT16H-202ENST00000552829 R4GN34 69 aa4.69□□□□□ -1.66
SUPT16H-202ENST00000552829 A0A0D9SG42 100 aa4.68□□□□□ -1.66
SUPT16H-202ENST00000552829 LINC01554Q52M75 96 aa4.66□□□□□ -1.66
SUPT16H-202ENST00000552829 PRO0628Q9UI54 55 aa4.62□□□□□ -1.67
SUPT16H-202ENST00000552829 SPINT4Q6UDR6 99 aa4.57□□□□□ -1.68
SUPT16H-202ENST00000552829 AHNAK2Q8IVF2 5795 aa4.55□□□□□ -1.68
SUPT16H-202ENST00000552829 KRTAP12-1P59990 96 aa4.54□□□□□ -1.68
SUPT16H-202ENST00000552829 PLAC4Q8WY50 150 aa4.54□□□□□ -1.68
SUPT16H-202ENST00000552829 KRTAP10-7P60409 375 aaPredicted RBP4.53□□□□□ -1.68
SUPT16H-202ENST00000552829 KRTAP10-12P60413 245 aa4.53□□□□□ -1.68
SUPT16H-202ENST00000552829 CAMK2N1Q7Z7J9 78 aa4.53□□□□□ -1.68
SUPT16H-202ENST00000552829 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
SUPT16H-202ENST00000552829 K7ERS5 55 aa4.5□□□□□ -1.69
SUPT16H-202ENST00000552829 KRTAP5-10Q6L8G5 202 aa4.48□□□□□ -1.69
SUPT16H-202ENST00000552829 PMAIP1Q13794 54 aa4.42□□□□□ -1.7
SUPT16H-202ENST00000552829 KRTAP5-7Q6L8G8 165 aa4.38□□□□□ -1.71
SUPT16H-202ENST00000552829 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
SUPT16H-202ENST00000552829 MT4P47944 62 aa4.35□□□□□ -1.71
SUPT16H-202ENST00000552829 ROMO1P60602 79 aa4.32□□□□□ -1.72
SUPT16H-202ENST00000552829 KRTAP19-3Q7Z4W3 81 aa4.31□□□□□ -1.72
SUPT16H-202ENST00000552829 C10orf95Q9H7T3 257 aa4.3□□□□□ -1.72
SUPT16H-202ENST00000552829 KRTAP19-7Q3SYF9 63 aa4.29□□□□□ -1.72
SUPT16H-202ENST00000552829 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
SUPT16H-202ENST00000552829 MT1EP04732 61 aa4.26□□□□□ -1.73
SUPT16H-202ENST00000552829 LCE1FQ5T754 118 aa4.26□□□□□ -1.73
SUPT16H-202ENST00000552829 KTN1-AS1Q86SY8 53 aa4.25□□□□□ -1.73
SUPT16H-202ENST00000552829 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
SUPT16H-202ENST00000552829 TNP1P09430 55 aa4.16□□□□□ -1.74
SUPT16H-202ENST00000552829 MT1GP13640 62 aa4.16□□□□□ -1.74
SUPT16H-202ENST00000552829 SPRR5A0A1B0GTR4 108 aa4.14□□□□□ -1.75
SUPT16H-202ENST00000552829 KRTAP25-1Q3LHN0 102 aa4.14□□□□□ -1.75
SUPT16H-202ENST00000552829 MT1MQ8N339 61 aa4.09□□□□□ -1.75
SUPT16H-202ENST00000552829 PP632Q6XCG6 107 aa4.08□□□□□ -1.76
SUPT16H-202ENST00000552829 LUZP6Q538Z0 58 aa4.04□□□□□ -1.76
SUPT16H-202ENST00000552829 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
SUPT16H-202ENST00000552829 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
SUPT16H-202ENST00000552829 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
SUPT16H-202ENST00000552829 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
SUPT16H-202ENST00000552829 MT1LQ93083 61 aa3.98□□□□□ -1.77
SUPT16H-202ENST00000552829 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
SUPT16H-202ENST00000552829 AHNAKQ09666 5890 aaKnown RBP3.92□□□□□ -1.78
SUPT16H-202ENST00000552829 KRTAP12-3P60328 96 aa3.84□□□□□ -1.79
SUPT16H-202ENST00000552829 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
SUPT16H-202ENST00000552829 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
SUPT16H-202ENST00000552829 KRTAP5-1Q6L8H4 278 aa3.8□□□□□ -1.8
SUPT16H-202ENST00000552829 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
SUPT16H-202ENST00000552829 KRTAP12-4P60329 112 aa3.79□□□□□ -1.8
SUPT16H-202ENST00000552829 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.8
SUPT16H-202ENST00000552829 SYNE1Q8NF91 8797 aaKnown RBP3.76□□□□□ -1.81
SUPT16H-202ENST00000552829 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
SUPT16H-202ENST00000552829 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
SUPT16H-202ENST00000552829 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
SUPT16H-202ENST00000552829 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
SUPT16H-202ENST00000552829 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
SUPT16H-202ENST00000552829 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.87
SUPT16H-202ENST00000552829 KRTAP6-1Q3LI64 71 aa3.39□□□□□ -1.87
SUPT16H-202ENST00000552829 MT1AP04731 61 aa3.38□□□□□ -1.87
SUPT16H-202ENST00000552829 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
SUPT16H-202ENST00000552829 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
SUPT16H-202ENST00000552829 INE1O15225 51 aa2.83□□□□□ -1.96
SUPT16H-202ENST00000552829 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
SUPT16H-202ENST00000552829 LCE1CQ5T751 118 aa2.78□□□□□ -1.96
SUPT16H-202ENST00000552829 PHGR1C9JFL3 82 aa2.58□□□□□ -2
SUPT16H-202ENST00000552829 PRM1P04553 51 aa2.29□□□□□ -2.04
SUPT16H-202ENST00000552829 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
SUPT16H-202ENST00000552829 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
SUPT16H-202ENST00000552829 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
SUPT16H-202ENST00000552829 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 92.5 ms