RNA–Protein interactions for RNA: ENST00000552691.1

ERBB3-220, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 3

Gene ERBB3, Length 291 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-220ENST00000552691 KRTAP19-3Q7Z4W3 81 aa1.52□□□□□ -2.17
ERBB3-220ENST00000552691 PRAC1Q96KF2 57 aa1.52□□□□□ -2.17
ERBB3-220ENST00000552691 MUC12Q9UKN1 5478 aa1.52□□□□□ -2.17
ERBB3-220ENST00000552691 SYNE2Q8WXH0 6885 aaKnown RBP1.52□□□□□ -2.17
ERBB3-220ENST00000552691 LCE5AQ5TCM9 118 aa1.51□□□□□ -2.17
ERBB3-220ENST00000552691 MT1LQ93083 61 aa1.51□□□□□ -2.17
ERBB3-220ENST00000552691 MT1GP13640 62 aa1.5□□□□□ -2.17
ERBB3-220ENST00000552691 KRTAP15-1Q3LI76 137 aa1.5□□□□□ -2.17
ERBB3-220ENST00000552691 SPRR2DP22532 72 aa1.47□□□□□ -2.17
ERBB3-220ENST00000552691 KRTAP19-4Q3LI73 84 aa1.47□□□□□ -2.17
ERBB3-220ENST00000552691 MT1MQ8N339 61 aa1.47□□□□□ -2.17
ERBB3-220ENST00000552691 KRTAP4-7Q9BYR0 210 aa1.46□□□□□ -2.18
ERBB3-220ENST00000552691 MDN1Q9NU22 5596 aa1.45□□□□□ -2.18
ERBB3-220ENST00000552691 LCE3CQ5T5A8 94 aa1.45□□□□□ -2.18
ERBB3-220ENST00000552691 KRTAP4-3Q9BYR4 195 aa1.44□□□□□ -2.18
ERBB3-220ENST00000552691 KRTAP2-3P0C7H8 128 aa1.43□□□□□ -2.18
ERBB3-220ENST00000552691 LCE3BQ5TA77 95 aa1.43□□□□□ -2.18
ERBB3-220ENST00000552691 KRTAP2-4Q9BYR9 128 aa1.43□□□□□ -2.18
ERBB3-220ENST00000552691 KRTAP20-1Q3LI63 56 aa1.42□□□□□ -2.18
ERBB3-220ENST00000552691 KRTAP2-2Q9BYT5 123 aa1.4□□□□□ -2.19
ERBB3-220ENST00000552691 KRTAP2-1Q9BYU5 128 aa1.4□□□□□ -2.19
ERBB3-220ENST00000552691 DSTQ03001 7570 aaKnown RBP1.39□□□□□ -2.19
ERBB3-220ENST00000552691 H3BS24 57 aa1.39□□□□□ -2.19
ERBB3-220ENST00000552691 LOC100996750A0A140TA64 210 aa1.37□□□□□ -2.19
ERBB3-220ENST00000552691 KRTAP9-6A8MVA2 160 aa1.36□□□□□ -2.19
ERBB3-220ENST00000552691 NEBP20929 6669 aa1.36□□□□□ -2.19
ERBB3-220ENST00000552691 SPRR5A0A1B0GTR4 108 aa1.35□□□□□ -2.19
ERBB3-220ENST00000552691 KRTAP5-5Q701N2 237 aaPredicted RBP1.34□□□□□ -2.19
ERBB3-220ENST00000552691 KRTAP5-4Q6L8H1 288 aa1.32□□□□□ -2.2
ERBB3-220ENST00000552691 LCE4AQ5TA78 99 aa1.31□□□□□ -2.2
ERBB3-220ENST00000552691 MT1AP04731 61 aa1.29□□□□□ -2.2
ERBB3-220ENST00000552691 KRTAP4-9Q9BYQ8 210 aa1.29□□□□□ -2.2
ERBB3-220ENST00000552691 MT4P47944 62 aa1.28□□□□□ -2.2
ERBB3-220ENST00000552691 KRTAP6-1Q3LI64 71 aa1.28□□□□□ -2.2
ERBB3-220ENST00000552691 LCE1DQ5T752 114 aa1.28□□□□□ -2.2
ERBB3-220ENST00000552691 KRTAP12-4P60329 112 aa1.27□□□□□ -2.21
ERBB3-220ENST00000552691 KRTAP4-6Q9BYQ5 205 aa1.27□□□□□ -2.21
ERBB3-220ENST00000552691 LUZP6Q538Z0 58 aa1.26□□□□□ -2.21
ERBB3-220ENST00000552691 NDUFAF8A1L188 74 aa1.24□□□□□ -2.21
ERBB3-220ENST00000552691 KRTAP20-2Q3LI61 65 aa1.24□□□□□ -2.21
ERBB3-220ENST00000552691 KRTAP9-4Q9BYQ2 154 aa1.24□□□□□ -2.21
ERBB3-220ENST00000552691 GPR98Q8WXG9 6306 aa1.22□□□□□ -2.21
ERBB3-220ENST00000552691 KRTAP5-3Q6L8H2 238 aa1.2□□□□□ -2.22
ERBB3-220ENST00000552691 SYNE1Q8NF91 8797 aaKnown RBP1.19□□□□□ -2.22
ERBB3-220ENST00000552691 KRTAP6-2Q3LI66 62 aa1.19□□□□□ -2.22
ERBB3-220ENST00000552691 KRTAP5-2Q701N4 177 aa1.19□□□□□ -2.22
ERBB3-220ENST00000552691 HMCN1Q96RW7 5635 aa1.18□□□□□ -2.22
ERBB3-220ENST00000552691 A0A0A0MQY5 61 aa1.17□□□□□ -2.22
ERBB3-220ENST00000552691 MT3P25713 68 aa1.17□□□□□ -2.22
ERBB3-220ENST00000552691 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
ERBB3-220ENST00000552691 KRTAP4-11Q9BYQ6 195 aa1.1□□□□□ -2.23
ERBB3-220ENST00000552691 LCE3DQ9BYE3 92 aa1.07□□□□□ -2.24
ERBB3-220ENST00000552691 INE1O15225 51 aa1.06□□□□□ -2.24
ERBB3-220ENST00000552691 KRTAP5-8O75690 187 aa1.06□□□□□ -2.24
ERBB3-220ENST00000552691 AHNAK2Q8IVF2 5795 aa1.05□□□□□ -2.24
ERBB3-220ENST00000552691 KRTAP5-7Q6L8G8 165 aa1.05□□□□□ -2.24
ERBB3-220ENST00000552691 OBSCNQ5VST9 7968 aa1.05□□□□□ -2.24
ERBB3-220ENST00000552691 LCE1EQ5T753 118 aa1.04□□□□□ -2.24
ERBB3-220ENST00000552691 KRTAP5-1Q6L8H4 278 aa1.04□□□□□ -2.24
ERBB3-220ENST00000552691 LCE3EQ5T5B0 92 aa1.03□□□□□ -2.24
ERBB3-220ENST00000552691 LCE1CQ5T751 118 aa0.97□□□□□ -2.25
ERBB3-220ENST00000552691 LCE1BQ5T7P3 118 aa0.97□□□□□ -2.25
ERBB3-220ENST00000552691 KRTAP9-9Q9BYP9 154 aa0.97□□□□□ -2.25
ERBB3-220ENST00000552691 KRTAP4-2Q9BYR5 136 aa0.97□□□□□ -2.25
ERBB3-220ENST00000552691 AHNAKQ09666 5890 aaKnown RBP0.93□□□□□ -2.26
ERBB3-220ENST00000552691 MUC5ACP98088 5654 aa0.9□□□□□ -2.27
ERBB3-220ENST00000552691 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.9□□□□□ -2.27
ERBB3-220ENST00000552691 MUC5BQ9HC84 5762 aaPredicted RBP0.9□□□□□ -2.27
ERBB3-220ENST00000552691 KRTAP5-11Q6L8G4 156 aa0.86□□□□□ -2.27
ERBB3-220ENST00000552691 PRM1P04553 51 aa0.85□□□□□ -2.27
ERBB3-220ENST00000552691 KRTAP21-2Q3LI59 83 aa0.84□□□□□ -2.27
ERBB3-220ENST00000552691 KRTAP4-12Q9BQ66 201 aa0.83□□□□□ -2.28
ERBB3-220ENST00000552691 LCE1FQ5T754 118 aa0.8□□□□□ -2.28
ERBB3-220ENST00000552691 KRTAP4-4Q9BYR3 166 aa0.75□□□□□ -2.29
ERBB3-220ENST00000552691 PHGR1C9JFL3 82 aa0.74□□□□□ -2.29
ERBB3-220ENST00000552691 MUC19Q7Z5P9 8384 aa0.59□□□□□ -2.31
ERBB3-220ENST00000552691 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
ERBB3-220ENST00000552691 MUC16Q8WXI7 14507 aa0.44□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 138.5 ms