RNA–Protein interactions for RNA: ENST00000552197.5

SLC38A1-210, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC38A1, Length 2,599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-210ENST00000552197 KRTAP4-6Q9BYQ5 205 aa3.99□□□□□ -1.77
SLC38A1-210ENST00000552197 SPRR2FQ96RM1 72 aa3.97□□□□□ -1.77
SLC38A1-210ENST00000552197 KRTAP9-7A8MTY7 169 aa3.95□□□□□ -1.78
SLC38A1-210ENST00000552197 MT1LQ93083 61 aa3.92□□□□□ -1.78
SLC38A1-210ENST00000552197 LCE4AQ5TA78 99 aa3.89□□□□□ -1.79
SLC38A1-210ENST00000552197 MDN1Q9NU22 5596 aa3.89□□□□□ -1.79
SLC38A1-210ENST00000552197 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
SLC38A1-210ENST00000552197 LCE3CQ5T5A8 94 aa3.87□□□□□ -1.79
SLC38A1-210ENST00000552197 KRTAP4-7Q9BYR0 210 aa3.87□□□□□ -1.79
SLC38A1-210ENST00000552197 KRTAP5-9P26371 169 aa3.86□□□□□ -1.79
SLC38A1-210ENST00000552197 KRTAP6-3Q3LI67 103 aa3.85□□□□□ -1.79
SLC38A1-210ENST00000552197 KRTAP19-3Q7Z4W3 81 aa3.85□□□□□ -1.79
SLC38A1-210ENST00000552197 MT1GP13640 62 aa3.8□□□□□ -1.8
SLC38A1-210ENST00000552197 LCE5AQ5TCM9 118 aa3.77□□□□□ -1.81
SLC38A1-210ENST00000552197 MT1MQ8N339 61 aa3.77□□□□□ -1.81
SLC38A1-210ENST00000552197 KRTAP19-4Q3LI73 84 aa3.77□□□□□ -1.81
SLC38A1-210ENST00000552197 LCE1AQ5T7P2 110 aa3.77□□□□□ -1.81
SLC38A1-210ENST00000552197 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
SLC38A1-210ENST00000552197 DSTQ03001 7570 aaKnown RBP3.76□□□□□ -1.81
SLC38A1-210ENST00000552197 SPRR2EP22531 72 aa3.76□□□□□ -1.81
SLC38A1-210ENST00000552197 SPRR2BP35325 72 aa3.76□□□□□ -1.81
SLC38A1-210ENST00000552197 SPRR2AP35326 72 aa3.76□□□□□ -1.81
SLC38A1-210ENST00000552197 KRTAP9-9Q9BYP9 154 aa3.73□□□□□ -1.81
SLC38A1-210ENST00000552197 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
SLC38A1-210ENST00000552197 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
SLC38A1-210ENST00000552197 NEBP20929 6669 aa3.63□□□□□ -1.83
SLC38A1-210ENST00000552197 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
SLC38A1-210ENST00000552197 SPRR2DP22532 72 aa3.61□□□□□ -1.83
SLC38A1-210ENST00000552197 LCE3BQ5TA77 95 aa3.55□□□□□ -1.84
SLC38A1-210ENST00000552197 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
SLC38A1-210ENST00000552197 KRTAP2-3P0C7H8 128 aa3.45□□□□□ -1.86
SLC38A1-210ENST00000552197 KRTAP2-4Q9BYR9 128 aa3.45□□□□□ -1.86
SLC38A1-210ENST00000552197 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
SLC38A1-210ENST00000552197 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
SLC38A1-210ENST00000552197 KRTAP2-1Q9BYU5 128 aa3.35□□□□□ -1.87
SLC38A1-210ENST00000552197 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
SLC38A1-210ENST00000552197 INE1O15225 51 aa3.32□□□□□ -1.88
SLC38A1-210ENST00000552197 LCE1DQ5T752 114 aa3.32□□□□□ -1.88
SLC38A1-210ENST00000552197 MT1AP04731 61 aa3.31□□□□□ -1.88
SLC38A1-210ENST00000552197 SYNE1Q8NF91 8797 aaKnown RBP3.31□□□□□ -1.88
SLC38A1-210ENST00000552197 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.9
SLC38A1-210ENST00000552197 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
SLC38A1-210ENST00000552197 MT4P47944 62 aa3.18□□□□□ -1.9
SLC38A1-210ENST00000552197 KRTAP12-4P60329 112 aa3.16□□□□□ -1.9
SLC38A1-210ENST00000552197 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
SLC38A1-210ENST00000552197 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
SLC38A1-210ENST00000552197 HMCN1Q96RW7 5635 aa3.1□□□□□ -1.91
SLC38A1-210ENST00000552197 KRTAP5-3Q6L8H2 238 aa3.07□□□□□ -1.92
SLC38A1-210ENST00000552197 KRTAP6-2Q3LI66 62 aa3.07□□□□□ -1.92
SLC38A1-210ENST00000552197 KRTAP20-2Q3LI61 65 aa3.04□□□□□ -1.92
SLC38A1-210ENST00000552197 MT3P25713 68 aa3.01□□□□□ -1.93
SLC38A1-210ENST00000552197 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
SLC38A1-210ENST00000552197 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
SLC38A1-210ENST00000552197 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
SLC38A1-210ENST00000552197 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
SLC38A1-210ENST00000552197 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
SLC38A1-210ENST00000552197 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
SLC38A1-210ENST00000552197 AHNAK2Q8IVF2 5795 aa2.72□□□□□ -1.97
SLC38A1-210ENST00000552197 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
SLC38A1-210ENST00000552197 LCE1EQ5T753 118 aa2.58□□□□□ -2
SLC38A1-210ENST00000552197 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
SLC38A1-210ENST00000552197 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
SLC38A1-210ENST00000552197 KRTAP5-8O75690 187 aa2.54□□□□□ -2
SLC38A1-210ENST00000552197 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
SLC38A1-210ENST00000552197 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
SLC38A1-210ENST00000552197 PRM1P04553 51 aa2.49□□□□□ -2.01
SLC38A1-210ENST00000552197 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
SLC38A1-210ENST00000552197 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
SLC38A1-210ENST00000552197 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
SLC38A1-210ENST00000552197 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
SLC38A1-210ENST00000552197 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
SLC38A1-210ENST00000552197 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
SLC38A1-210ENST00000552197 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
SLC38A1-210ENST00000552197 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
SLC38A1-210ENST00000552197 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
SLC38A1-210ENST00000552197 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
SLC38A1-210ENST00000552197 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 91.2 ms