RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 RPS28P62857 69 aaKnown RBP5.81□□□□□ -1.48
CHMP1A-206ENST00000549139 MT1EP04732 61 aa5.8□□□□□ -1.48
CHMP1A-206ENST00000549139 AHNAK2Q8IVF2 5795 aa5.8□□□□□ -1.48
CHMP1A-206ENST00000549139 KRTAP19-3Q7Z4W3 81 aa5.79□□□□□ -1.48
CHMP1A-206ENST00000549139 KRTAP5-10Q6L8G5 202 aa5.78□□□□□ -1.48
CHMP1A-206ENST00000549139 KRTAP19-5Q3LI72 72 aa5.76□□□□□ -1.49
CHMP1A-206ENST00000549139 K7ERS5 55 aa5.74□□□□□ -1.49
CHMP1A-206ENST00000549139 MT4P47944 62 aa5.74□□□□□ -1.49
CHMP1A-206ENST00000549139 LCE3AQ5TA76 89 aa5.73□□□□□ -1.49
CHMP1A-206ENST00000549139 LCE4AQ5TA78 99 aa5.73□□□□□ -1.49
CHMP1A-206ENST00000549139 A6NED7 52 aa5.67□□□□□ -1.5
CHMP1A-206ENST00000549139 MT1GP13640 62 aa5.64□□□□□ -1.51
CHMP1A-206ENST00000549139 KRTAP25-1Q3LHN0 102 aa5.62□□□□□ -1.51
CHMP1A-206ENST00000549139 KRTAP5-7Q6L8G8 165 aa5.62□□□□□ -1.51
CHMP1A-206ENST00000549139 KRTAP5-4Q6L8H1 288 aa5.59□□□□□ -1.51
CHMP1A-206ENST00000549139 PP632Q6XCG6 107 aa5.58□□□□□ -1.52
CHMP1A-206ENST00000549139 MT1LQ93083 61 aa5.58□□□□□ -1.52
CHMP1A-206ENST00000549139 KRTAP4-6Q9BYQ5 205 aa5.56□□□□□ -1.52
CHMP1A-206ENST00000549139 KRTAP12-3P60328 96 aa5.52□□□□□ -1.53
CHMP1A-206ENST00000549139 KRTAP5-3Q6L8H2 238 aa5.51□□□□□ -1.53
CHMP1A-206ENST00000549139 MT1MQ8N339 61 aa5.51□□□□□ -1.53
CHMP1A-206ENST00000549139 CDC42SE1Q9NRR8 79 aa5.47□□□□□ -1.53
CHMP1A-206ENST00000549139 KRTAP23-1A1A580 65 aa5.46□□□□□ -1.54
CHMP1A-206ENST00000549139 KRTAP4-3Q9BYR4 195 aa5.4□□□□□ -1.54
CHMP1A-206ENST00000549139 ROMO1P60602 79 aa5.38□□□□□ -1.55
CHMP1A-206ENST00000549139 SPRR5A0A1B0GTR4 108 aa5.32□□□□□ -1.56
CHMP1A-206ENST00000549139 KRTAP19-4Q3LI73 84 aa5.3□□□□□ -1.56
CHMP1A-206ENST00000549139 KRTAP4-7Q9BYR0 210 aa5.3□□□□□ -1.56
CHMP1A-206ENST00000549139 KRTAP20-2Q3LI61 65 aa5.28□□□□□ -1.56
CHMP1A-206ENST00000549139 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
CHMP1A-206ENST00000549139 SVIPQ8NHG7 77 aa5.18□□□□□ -1.58
CHMP1A-206ENST00000549139 KRTAP5-5Q701N2 237 aaPredicted RBP5.13□□□□□ -1.59
CHMP1A-206ENST00000549139 LCE3CQ5T5A8 94 aa5.11□□□□□ -1.59
CHMP1A-206ENST00000549139 BRK1Q8WUW1 75 aa5.07□□□□□ -1.6
CHMP1A-206ENST00000549139 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
CHMP1A-206ENST00000549139 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
CHMP1A-206ENST00000549139 LOC100996750A0A140TA64 210 aa5.02□□□□□ -1.61
CHMP1A-206ENST00000549139 KRTAP4-11Q9BYQ6 195 aa4.95□□□□□ -1.62
CHMP1A-206ENST00000549139 MUC5ACP98088 5654 aa4.91□□□□□ -1.62
CHMP1A-206ENST00000549139 MUC5BQ9HC84 5762 aaPredicted RBP4.91□□□□□ -1.62
CHMP1A-206ENST00000549139 AHNAKQ09666 5890 aaKnown RBP4.9□□□□□ -1.63
CHMP1A-206ENST00000549139 KRTAP5-8O75690 187 aa4.82□□□□□ -1.64
CHMP1A-206ENST00000549139 KRTAP9-6A8MVA2 160 aa4.8□□□□□ -1.64
CHMP1A-206ENST00000549139 PMAIP1Q13794 54 aa4.8□□□□□ -1.64
CHMP1A-206ENST00000549139 KRTAP5-2Q701N4 177 aa4.8□□□□□ -1.64
CHMP1A-206ENST00000549139 MT1AP04731 61 aa4.77□□□□□ -1.65
CHMP1A-206ENST00000549139 KRTAP6-1Q3LI64 71 aa4.71□□□□□ -1.66
CHMP1A-206ENST00000549139 OBSCNQ5VST9 7968 aa4.66□□□□□ -1.66
CHMP1A-206ENST00000549139 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
CHMP1A-206ENST00000549139 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
CHMP1A-206ENST00000549139 PRO0628Q9UI54 55 aa4.58□□□□□ -1.68
CHMP1A-206ENST00000549139 PRAC1Q96KF2 57 aa4.55□□□□□ -1.68
CHMP1A-206ENST00000549139 KRTAP6-2Q3LI66 62 aa4.48□□□□□ -1.69
CHMP1A-206ENST00000549139 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
CHMP1A-206ENST00000549139 MT3P25713 68 aa4.36□□□□□ -1.71
CHMP1A-206ENST00000549139 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
CHMP1A-206ENST00000549139 LCE1EQ5T753 118 aa4□□□□□ -1.77
CHMP1A-206ENST00000549139 H3BS24 57 aa3.94□□□□□ -1.78
CHMP1A-206ENST00000549139 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
CHMP1A-206ENST00000549139 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
CHMP1A-206ENST00000549139 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
CHMP1A-206ENST00000549139 LCE1BQ5T7P3 118 aa3.77□□□□□ -1.81
CHMP1A-206ENST00000549139 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
CHMP1A-206ENST00000549139 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
CHMP1A-206ENST00000549139 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
CHMP1A-206ENST00000549139 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
CHMP1A-206ENST00000549139 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
CHMP1A-206ENST00000549139 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
CHMP1A-206ENST00000549139 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
CHMP1A-206ENST00000549139 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
CHMP1A-206ENST00000549139 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
CHMP1A-206ENST00000549139 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
CHMP1A-206ENST00000549139 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
CHMP1A-206ENST00000549139 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
CHMP1A-206ENST00000549139 PRM1P04553 51 aa2.75□□□□□ -1.97
CHMP1A-206ENST00000549139 INE1O15225 51 aa2.65□□□□□ -1.99
CHMP1A-206ENST00000549139 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
CHMP1A-206ENST00000549139 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 93.4 ms