RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
MTHFD1-202ENST00000545908 KRTAP20-1Q3LI63 56 aa2.88□□□□□ -1.95
MTHFD1-202ENST00000545908 PRM1P04553 51 aa2.85□□□□□ -1.95
MTHFD1-202ENST00000545908 KRTAP9-7A8MTY7 169 aa2.84□□□□□ -1.95
MTHFD1-202ENST00000545908 EPPK1P58107 5090 aaKnown RBP2.83□□□□□ -1.96
MTHFD1-202ENST00000545908 LOC100996750A0A140TA64 210 aa2.83□□□□□ -1.96
MTHFD1-202ENST00000545908 KRTAP4-3Q9BYR4 195 aa2.82□□□□□ -1.96
MTHFD1-202ENST00000545908 PCLOQ9Y6V0 5065 aa2.79□□□□□ -1.96
MTHFD1-202ENST00000545908 LCE4AQ5TA78 99 aa2.78□□□□□ -1.96
MTHFD1-202ENST00000545908 KRTAP6-3Q3LI67 103 aa2.78□□□□□ -1.96
MTHFD1-202ENST00000545908 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.76□□□□□ -1.97
MTHFD1-202ENST00000545908 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
MTHFD1-202ENST00000545908 KRTAP2-3P0C7H8 128 aa2.72□□□□□ -1.97
MTHFD1-202ENST00000545908 KRTAP2-4Q9BYR9 128 aa2.72□□□□□ -1.97
MTHFD1-202ENST00000545908 KRTAP19-7Q3SYF9 63 aa2.7□□□□□ -1.98
MTHFD1-202ENST00000545908 LCE1DQ5T752 114 aa2.69□□□□□ -1.98
MTHFD1-202ENST00000545908 HMCN2Q8NDA2 5059 aa2.66□□□□□ -1.98
MTHFD1-202ENST00000545908 LCE1AQ5T7P2 110 aa2.65□□□□□ -1.98
MTHFD1-202ENST00000545908 MT1AP04731 61 aa2.65□□□□□ -1.98
MTHFD1-202ENST00000545908 FAT4Q6V0I7 4981 aa2.63□□□□□ -1.99
MTHFD1-202ENST00000545908 ABCA13Q86UQ4 5058 aa2.63□□□□□ -1.99
MTHFD1-202ENST00000545908 KRTAP4-9Q9BYQ8 210 aa2.6□□□□□ -1.99
MTHFD1-202ENST00000545908 KRTAP2-2Q9BYT5 123 aa2.6□□□□□ -1.99
MTHFD1-202ENST00000545908 KRTAP2-1Q9BYU5 128 aa2.6□□□□□ -1.99
MTHFD1-202ENST00000545908 LCE5AQ5TCM9 118 aa2.57□□□□□ -2
MTHFD1-202ENST00000545908 KRTAP9-4Q9BYQ2 154 aa2.52□□□□□ -2.01
MTHFD1-202ENST00000545908 KRTAP6-1Q3LI64 71 aa2.51□□□□□ -2.01
MTHFD1-202ENST00000545908 KRTAP6-2Q3LI66 62 aa2.51□□□□□ -2.01
MTHFD1-202ENST00000545908 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
MTHFD1-202ENST00000545908 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
MTHFD1-202ENST00000545908 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
MTHFD1-202ENST00000545908 RNF213Q63HN8 5207 aa2.48□□□□□ -2.01
MTHFD1-202ENST00000545908 SYNE2Q8WXH0 6885 aaKnown RBP2.44□□□□□ -2.02
MTHFD1-202ENST00000545908 KRTAP9-6A8MVA2 160 aa2.37□□□□□ -2.03
MTHFD1-202ENST00000545908 KRTAP5-9P26371 169 aa2.33□□□□□ -2.04
MTHFD1-202ENST00000545908 UBR4Q5T4S7 5183 aa2.33□□□□□ -2.04
MTHFD1-202ENST00000545908 FSIP2Q5CZC0 6907 aa2.3□□□□□ -2.04
MTHFD1-202ENST00000545908 KRTAP9-9Q9BYP9 154 aa2.29□□□□□ -2.04
MTHFD1-202ENST00000545908 SYNE1Q8NF91 8797 aaKnown RBP2.26□□□□□ -2.05
MTHFD1-202ENST00000545908 MUC2Q02817 5179 aa2.25□□□□□ -2.05
MTHFD1-202ENST00000545908 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
MTHFD1-202ENST00000545908 KRTAP4-6Q9BYQ5 205 aa2.2□□□□□ -2.06
MTHFD1-202ENST00000545908 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
MTHFD1-202ENST00000545908 NEBP20929 6669 aa2.13□□□□□ -2.07
MTHFD1-202ENST00000545908 KRTAP4-11Q9BYQ6 195 aa2.12□□□□□ -2.07
MTHFD1-202ENST00000545908 MACF1Q9UPN3 7388 aaKnown RBP2.11□□□□□ -2.07
MTHFD1-202ENST00000545908 KRTAP5-4Q6L8H1 288 aa2.1□□□□□ -2.07
MTHFD1-202ENST00000545908 SSPOA2VEC9 5147 aa2.08□□□□□ -2.08
MTHFD1-202ENST00000545908 OBSCNQ5VST9 7968 aa2.05□□□□□ -2.08
MTHFD1-202ENST00000545908 KMT2DO14686 5537 aa2.04□□□□□ -2.08
MTHFD1-202ENST00000545908 USH2AO75445 5202 aa1.99□□□□□ -2.09
MTHFD1-202ENST00000545908 KRTAP4-12Q9BQ66 201 aa1.93□□□□□ -2.1
MTHFD1-202ENST00000545908 KRTAP4-2Q9BYR5 136 aa1.93□□□□□ -2.1
MTHFD1-202ENST00000545908 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
MTHFD1-202ENST00000545908 KRTAP5-5Q701N2 237 aaPredicted RBP1.91□□□□□ -2.1
MTHFD1-202ENST00000545908 FCGBPQ9Y6R7 5405 aaPredicted RBP1.91□□□□□ -2.1
MTHFD1-202ENST00000545908 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
MTHFD1-202ENST00000545908 DSTQ03001 7570 aaKnown RBP1.81□□□□□ -2.12
MTHFD1-202ENST00000545908 AHNAK2Q8IVF2 5795 aa1.79□□□□□ -2.12
MTHFD1-202ENST00000545908 KRTAP5-3Q6L8H2 238 aa1.79□□□□□ -2.12
MTHFD1-202ENST00000545908 HMCN1Q96RW7 5635 aa1.78□□□□□ -2.12
MTHFD1-202ENST00000545908 MUC12Q9UKN1 5478 aa1.7□□□□□ -2.14
MTHFD1-202ENST00000545908 MDN1Q9NU22 5596 aa1.69□□□□□ -2.14
MTHFD1-202ENST00000545908 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
MTHFD1-202ENST00000545908 KRTAP5-8O75690 187 aa1.65□□□□□ -2.15
MTHFD1-202ENST00000545908 KRTAP5-2Q701N4 177 aa1.59□□□□□ -2.15
MTHFD1-202ENST00000545908 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
MTHFD1-202ENST00000545908 MUC5BQ9HC84 5762 aaPredicted RBP1.53□□□□□ -2.16
MTHFD1-202ENST00000545908 MUC5ACP98088 5654 aa1.5□□□□□ -2.17
MTHFD1-202ENST00000545908 KRTAP5-10Q6L8G5 202 aa1.42□□□□□ -2.18
MTHFD1-202ENST00000545908 KRTAP5-1Q6L8H4 278 aa1.39□□□□□ -2.19
MTHFD1-202ENST00000545908 KRTAP5-11Q6L8G4 156 aa1.37□□□□□ -2.19
MTHFD1-202ENST00000545908 KRTAP5-7Q6L8G8 165 aa1.32□□□□□ -2.2
MTHFD1-202ENST00000545908 KRTAP21-2Q3LI59 83 aa1.28□□□□□ -2.2
MTHFD1-202ENST00000545908 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.2□□□□□ -2.22
MTHFD1-202ENST00000545908 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
MTHFD1-202ENST00000545908 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 7.2 ms