RNA–Protein interactions for RNA: ENST00000544001.6

ITFG1-204, Transcript of integrin alpha FG-GAP repeat containing 1, humanhuman

TSL 2 BASIC

Gene ITFG1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITFG1-204ENST00000544001 KRTAP6-3Q3LI67 103 aa4.86□□□□□ -1.63
ITFG1-204ENST00000544001 LCE3CQ5T5A8 94 aa4.86□□□□□ -1.63
ITFG1-204ENST00000544001 KRTAP4-12Q9BQ66 201 aa4.85□□□□□ -1.63
ITFG1-204ENST00000544001 A0A0A0MQY5 61 aa4.83□□□□□ -1.64
ITFG1-204ENST00000544001 NEBP20929 6669 aa4.77□□□□□ -1.65
ITFG1-204ENST00000544001 MT1EP04732 61 aa4.76□□□□□ -1.65
ITFG1-204ENST00000544001 LCE3BQ5TA77 95 aa4.75□□□□□ -1.65
ITFG1-204ENST00000544001 MT1LQ93083 61 aa4.72□□□□□ -1.65
ITFG1-204ENST00000544001 KRTAP19-4Q3LI73 84 aa4.71□□□□□ -1.66
ITFG1-204ENST00000544001 KRTAP9-6A8MVA2 160 aa4.69□□□□□ -1.66
ITFG1-204ENST00000544001 KRTAP4-7Q9BYR0 210 aa4.69□□□□□ -1.66
ITFG1-204ENST00000544001 MUC12Q9UKN1 5478 aa4.64□□□□□ -1.67
ITFG1-204ENST00000544001 KRTAP9-9Q9BYP9 154 aa4.64□□□□□ -1.67
ITFG1-204ENST00000544001 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
ITFG1-204ENST00000544001 KRTAP20-1Q3LI63 56 aa4.63□□□□□ -1.67
ITFG1-204ENST00000544001 LCE4AQ5TA78 99 aa4.62□□□□□ -1.67
ITFG1-204ENST00000544001 KRTAP5-9P26371 169 aa4.53□□□□□ -1.68
ITFG1-204ENST00000544001 MDN1Q9NU22 5596 aa4.5□□□□□ -1.69
ITFG1-204ENST00000544001 KRTAP19-3Q7Z4W3 81 aa4.48□□□□□ -1.69
ITFG1-204ENST00000544001 MT1MQ8N339 61 aa4.46□□□□□ -1.7
ITFG1-204ENST00000544001 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
ITFG1-204ENST00000544001 INE1O15225 51 aa4.45□□□□□ -1.7
ITFG1-204ENST00000544001 KRTAP2-3P0C7H8 128 aa4.45□□□□□ -1.7
ITFG1-204ENST00000544001 KRTAP2-4Q9BYR9 128 aa4.45□□□□□ -1.7
ITFG1-204ENST00000544001 KRTAP2-1Q9BYU5 128 aa4.45□□□□□ -1.7
ITFG1-204ENST00000544001 LCE1DQ5T752 114 aa4.44□□□□□ -1.7
ITFG1-204ENST00000544001 MT1GP13640 62 aa4.44□□□□□ -1.7
ITFG1-204ENST00000544001 SPRR2FQ96RM1 72 aa4.39□□□□□ -1.71
ITFG1-204ENST00000544001 LCE5AQ5TCM9 118 aa4.35□□□□□ -1.71
ITFG1-204ENST00000544001 SPRR2EP22531 72 aa4.35□□□□□ -1.71
ITFG1-204ENST00000544001 SPRR2BP35325 72 aa4.35□□□□□ -1.71
ITFG1-204ENST00000544001 SPRR2AP35326 72 aa4.35□□□□□ -1.71
ITFG1-204ENST00000544001 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
ITFG1-204ENST00000544001 KRTAP4-2Q9BYR5 136 aa4.29□□□□□ -1.72
ITFG1-204ENST00000544001 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
ITFG1-204ENST00000544001 DSTQ03001 7570 aaKnown RBP4.24□□□□□ -1.73
ITFG1-204ENST00000544001 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
ITFG1-204ENST00000544001 SPRR2DP22532 72 aa4.21□□□□□ -1.74
ITFG1-204ENST00000544001 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
ITFG1-204ENST00000544001 GPR98Q8WXG9 6306 aa4.04□□□□□ -1.76
ITFG1-204ENST00000544001 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
ITFG1-204ENST00000544001 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
ITFG1-204ENST00000544001 MT1AP04731 61 aa3.98□□□□□ -1.77
ITFG1-204ENST00000544001 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
ITFG1-204ENST00000544001 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.78
ITFG1-204ENST00000544001 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
ITFG1-204ENST00000544001 HMCN1Q96RW7 5635 aa3.71□□□□□ -1.82
ITFG1-204ENST00000544001 LCE3DQ9BYE3 92 aa3.7□□□□□ -1.82
ITFG1-204ENST00000544001 MT4P47944 62 aa3.7□□□□□ -1.82
ITFG1-204ENST00000544001 AHNAK2Q8IVF2 5795 aa3.67□□□□□ -1.82
ITFG1-204ENST00000544001 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
ITFG1-204ENST00000544001 KRTAP5-10Q6L8G5 202 aa3.63□□□□□ -1.83
ITFG1-204ENST00000544001 KRTAP6-2Q3LI66 62 aa3.6□□□□□ -1.83
ITFG1-204ENST00000544001 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
ITFG1-204ENST00000544001 MT3P25713 68 aa3.56□□□□□ -1.84
ITFG1-204ENST00000544001 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
ITFG1-204ENST00000544001 PRM1P04553 51 aa3.4□□□□□ -1.86
ITFG1-204ENST00000544001 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.87
ITFG1-204ENST00000544001 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
ITFG1-204ENST00000544001 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.87
ITFG1-204ENST00000544001 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
ITFG1-204ENST00000544001 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
ITFG1-204ENST00000544001 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
ITFG1-204ENST00000544001 MUC5BQ9HC84 5762 aaPredicted RBP3.04□□□□□ -1.92
ITFG1-204ENST00000544001 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
ITFG1-204ENST00000544001 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
ITFG1-204ENST00000544001 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
ITFG1-204ENST00000544001 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
ITFG1-204ENST00000544001 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.96
ITFG1-204ENST00000544001 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
ITFG1-204ENST00000544001 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
ITFG1-204ENST00000544001 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
ITFG1-204ENST00000544001 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
ITFG1-204ENST00000544001 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
ITFG1-204ENST00000544001 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
ITFG1-204ENST00000544001 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
ITFG1-204ENST00000544001 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 331.5 ms