RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 DSTQ03001 7570 aaKnown RBP1.97□□□□□ -2.09
KDM3B-209ENST00000542866 OBSCNQ5VST9 7968 aa1.97□□□□□ -2.09
KDM3B-209ENST00000542866 KRTAP19-5Q3LI72 72 aa1.96□□□□□ -2.1
KDM3B-209ENST00000542866 LCE5AQ5TCM9 118 aa1.96□□□□□ -2.1
KDM3B-209ENST00000542866 KRTAP19-6Q3LI70 58 aa1.95□□□□□ -2.1
KDM3B-209ENST00000542866 LCE3CQ5T5A8 94 aa1.95□□□□□ -2.1
KDM3B-209ENST00000542866 KRTAP4-8A0A0G2JLE6 195 aa1.95□□□□□ -2.1
KDM3B-209ENST00000542866 SYNE2Q8WXH0 6885 aaKnown RBP1.94□□□□□ -2.1
KDM3B-209ENST00000542866 SSPOA2VEC9 5147 aa1.94□□□□□ -2.1
KDM3B-209ENST00000542866 GPR98Q8WXG9 6306 aa1.93□□□□□ -2.1
KDM3B-209ENST00000542866 KRTAP6-3Q3LI67 103 aa1.93□□□□□ -2.1
KDM3B-209ENST00000542866 KMT2DO14686 5537 aa1.92□□□□□ -2.1
KDM3B-209ENST00000542866 MACF1Q9UPN3 7388 aaKnown RBP1.92□□□□□ -2.1
KDM3B-209ENST00000542866 KRTAP2-3P0C7H8 128 aa1.9□□□□□ -2.11
KDM3B-209ENST00000542866 KRTAP2-4Q9BYR9 128 aa1.9□□□□□ -2.11
KDM3B-209ENST00000542866 KRTAP9-6A8MVA2 160 aa1.9□□□□□ -2.11
KDM3B-209ENST00000542866 LCE1DQ5T752 114 aa1.9□□□□□ -2.11
KDM3B-209ENST00000542866 SPRR2FQ96RM1 72 aa1.88□□□□□ -2.11
KDM3B-209ENST00000542866 KRTAP4-7Q9BYR0 210 aa1.88□□□□□ -2.11
KDM3B-209ENST00000542866 SPRR2EP22531 72 aa1.87□□□□□ -2.11
KDM3B-209ENST00000542866 SPRR2BP35325 72 aa1.87□□□□□ -2.11
KDM3B-209ENST00000542866 SPRR2AP35326 72 aa1.87□□□□□ -2.11
KDM3B-209ENST00000542866 FCGBPQ9Y6R7 5405 aaPredicted RBP1.86□□□□□ -2.11
KDM3B-209ENST00000542866 NEBP20929 6669 aa1.85□□□□□ -2.11
KDM3B-209ENST00000542866 KRTAP19-4Q3LI73 84 aa1.84□□□□□ -2.11
KDM3B-209ENST00000542866 SYNE1Q8NF91 8797 aaKnown RBP1.84□□□□□ -2.12
KDM3B-209ENST00000542866 LCE1FQ5T754 118 aa1.84□□□□□ -2.12
KDM3B-209ENST00000542866 KRTAP4-9Q9BYQ8 210 aa1.84□□□□□ -2.12
KDM3B-209ENST00000542866 KRTAP2-1Q9BYU5 128 aa1.84□□□□□ -2.12
KDM3B-209ENST00000542866 SPRR2DP22532 72 aa1.82□□□□□ -2.12
KDM3B-209ENST00000542866 KRTAP4-2Q9BYR5 136 aa1.81□□□□□ -2.12
KDM3B-209ENST00000542866 KRTAP19-7Q3SYF9 63 aa1.81□□□□□ -2.12
KDM3B-209ENST00000542866 LCE1AQ5T7P2 110 aa1.8□□□□□ -2.12
KDM3B-209ENST00000542866 KRTAP4-11Q9BYQ6 195 aa1.8□□□□□ -2.12
KDM3B-209ENST00000542866 MT1LQ93083 61 aa1.77□□□□□ -2.13
KDM3B-209ENST00000542866 LCE1EQ5T753 118 aa1.77□□□□□ -2.13
KDM3B-209ENST00000542866 MUC12Q9UKN1 5478 aa1.75□□□□□ -2.13
KDM3B-209ENST00000542866 MT1EP04732 61 aa1.75□□□□□ -2.13
KDM3B-209ENST00000542866 MT1GP13640 62 aa1.72□□□□□ -2.13
KDM3B-209ENST00000542866 KRTAP4-3Q9BYR4 195 aa1.72□□□□□ -2.13
KDM3B-209ENST00000542866 KRTAP12-4P60329 112 aa1.72□□□□□ -2.13
KDM3B-209ENST00000542866 KRTAP19-3Q7Z4W3 81 aa1.72□□□□□ -2.13
KDM3B-209ENST00000542866 KRTAP5-3Q6L8H2 238 aa1.7□□□□□ -2.14
KDM3B-209ENST00000542866 KRTAP5-9P26371 169 aa1.68□□□□□ -2.14
KDM3B-209ENST00000542866 MDN1Q9NU22 5596 aa1.68□□□□□ -2.14
KDM3B-209ENST00000542866 MT1MQ8N339 61 aa1.66□□□□□ -2.14
KDM3B-209ENST00000542866 LCE3EQ5T5B0 92 aa1.61□□□□□ -2.15
KDM3B-209ENST00000542866 MT4P47944 62 aa1.61□□□□□ -2.15
KDM3B-209ENST00000542866 HMCN1Q96RW7 5635 aa1.55□□□□□ -2.16
KDM3B-209ENST00000542866 LCE3DQ9BYE3 92 aa1.54□□□□□ -2.16
KDM3B-209ENST00000542866 PRM1P04553 51 aa1.54□□□□□ -2.16
KDM3B-209ENST00000542866 KRTAP6-1Q3LI64 71 aa1.53□□□□□ -2.17
KDM3B-209ENST00000542866 MT1AP04731 61 aa1.52□□□□□ -2.17
KDM3B-209ENST00000542866 KRTAP5-5Q701N2 237 aaPredicted RBP1.49□□□□□ -2.17
KDM3B-209ENST00000542866 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
KDM3B-209ENST00000542866 MUC5BQ9HC84 5762 aaPredicted RBP1.47□□□□□ -2.17
KDM3B-209ENST00000542866 MT3P25713 68 aa1.46□□□□□ -2.18
KDM3B-209ENST00000542866 KRTAP6-2Q3LI66 62 aa1.44□□□□□ -2.18
KDM3B-209ENST00000542866 AHNAK2Q8IVF2 5795 aa1.41□□□□□ -2.18
KDM3B-209ENST00000542866 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.41□□□□□ -2.18
KDM3B-209ENST00000542866 KRTAP5-4Q6L8H1 288 aa1.37□□□□□ -2.19
KDM3B-209ENST00000542866 KRTAP20-2Q3LI61 65 aa1.35□□□□□ -2.19
KDM3B-209ENST00000542866 AHNAKQ09666 5890 aaKnown RBP1.35□□□□□ -2.19
KDM3B-209ENST00000542866 KRTAP5-7Q6L8G8 165 aa1.34□□□□□ -2.19
KDM3B-209ENST00000542866 KRTAP5-10Q6L8G5 202 aa1.31□□□□□ -2.2
KDM3B-209ENST00000542866 LCE1BQ5T7P3 118 aa1.27□□□□□ -2.21
KDM3B-209ENST00000542866 KRTAP5-11Q6L8G4 156 aa1.26□□□□□ -2.21
KDM3B-209ENST00000542866 MUC5ACP98088 5654 aa1.25□□□□□ -2.21
KDM3B-209ENST00000542866 KRTAP5-2Q701N4 177 aa1.21□□□□□ -2.22
KDM3B-209ENST00000542866 KRTAP5-8O75690 187 aa1.16□□□□□ -2.22
KDM3B-209ENST00000542866 LCE1CQ5T751 118 aa1.14□□□□□ -2.23
KDM3B-209ENST00000542866 KRTAP5-1Q6L8H4 278 aa1.07□□□□□ -2.24
KDM3B-209ENST00000542866 PHGR1C9JFL3 82 aa1.04□□□□□ -2.24
KDM3B-209ENST00000542866 KRTAP4-4Q9BYR3 166 aa1.01□□□□□ -2.25
KDM3B-209ENST00000542866 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
KDM3B-209ENST00000542866 KRTAP21-2Q3LI59 83 aa0.95□□□□□ -2.26
KDM3B-209ENST00000542866 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 137.3 ms