RNA–Protein interactions for RNA: ENST00000541377.5

CLASP1-215, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 5 BASIC

Gene CLASP1, Length 7,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-215ENST00000541377 KRTAP2-3P0C7H8 128 aa2.72□□□□□ -1.97
CLASP1-215ENST00000541377 KRTAP2-4Q9BYR9 128 aa2.72□□□□□ -1.97
CLASP1-215ENST00000541377 HERC2O95714 4834 aa2.72□□□□□ -1.97
CLASP1-215ENST00000541377 BIRC6Q9NR09 4857 aa2.69□□□□□ -1.98
CLASP1-215ENST00000541377 LOC100996750A0A140TA64 210 aa2.67□□□□□ -1.98
CLASP1-215ENST00000541377 SYNE2Q8WXH0 6885 aaKnown RBP2.66□□□□□ -1.98
CLASP1-215ENST00000541377 LCE2AQ5TA79 106 aaPredicted RBP2.65□□□□□ -1.99
CLASP1-215ENST00000541377 HSPG2P98160 4391 aa2.64□□□□□ -1.99
CLASP1-215ENST00000541377 ABCA13Q86UQ4 5058 aa2.64□□□□□ -1.99
CLASP1-215ENST00000541377 KRTAP4-9Q9BYQ8 210 aa2.63□□□□□ -1.99
CLASP1-215ENST00000541377 PCLOQ9Y6V0 5065 aa2.63□□□□□ -1.99
CLASP1-215ENST00000541377 TNXBP22105 4242 aa2.61□□□□□ -1.99
CLASP1-215ENST00000541377 KRTAP4-3Q9BYR4 195 aa2.61□□□□□ -1.99
CLASP1-215ENST00000541377 HERC1Q15751 4861 aa2.6□□□□□ -1.99
CLASP1-215ENST00000541377 LPAP08519 4548 aa2.6□□□□□ -1.99
CLASP1-215ENST00000541377 KMT2CQ8NEZ4 4911 aaKnown RBP2.59□□□□□ -1.99
CLASP1-215ENST00000541377 LRP2P98164 4655 aa2.59□□□□□ -2
CLASP1-215ENST00000541377 LCE4AQ5TA78 99 aa2.59□□□□□ -2
CLASP1-215ENST00000541377 KRTAP2-2Q9BYT5 123 aa2.58□□□□□ -2
CLASP1-215ENST00000541377 KRTAP2-1Q9BYU5 128 aa2.58□□□□□ -2
CLASP1-215ENST00000541377 KRTAP9-9Q9BYP9 154 aa2.56□□□□□ -2
CLASP1-215ENST00000541377 KRTAP6-3Q3LI67 103 aa2.55□□□□□ -2
CLASP1-215ENST00000541377 EPPK1P58107 5090 aaKnown RBP2.54□□□□□ -2
CLASP1-215ENST00000541377 MT1AP04731 61 aa2.53□□□□□ -2.01
CLASP1-215ENST00000541377 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.52□□□□□ -2.01
CLASP1-215ENST00000541377 RNF213Q63HN8 5207 aa2.5□□□□□ -2.01
CLASP1-215ENST00000541377 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
CLASP1-215ENST00000541377 MUC17Q685J3 4493 aa2.48□□□□□ -2.01
CLASP1-215ENST00000541377 KRTAP19-2Q3LHN2 52 aa2.47□□□□□ -2.01
CLASP1-215ENST00000541377 UBR4Q5T4S7 5183 aa2.46□□□□□ -2.02
CLASP1-215ENST00000541377 HMCN2Q8NDA2 5059 aa2.43□□□□□ -2.02
CLASP1-215ENST00000541377 FSIP2Q5CZC0 6907 aa2.41□□□□□ -2.02
CLASP1-215ENST00000541377 KRTAP9-4Q9BYQ2 154 aa2.38□□□□□ -2.03
CLASP1-215ENST00000541377 FAT4Q6V0I7 4981 aa2.36□□□□□ -2.03
CLASP1-215ENST00000541377 SYNE1Q8NF91 8797 aaKnown RBP2.34□□□□□ -2.04
CLASP1-215ENST00000541377 KRTAP6-1Q3LI64 71 aa2.32□□□□□ -2.04
CLASP1-215ENST00000541377 KRTAP19-7Q3SYF9 63 aa2.3□□□□□ -2.04
CLASP1-215ENST00000541377 MUC2Q02817 5179 aa2.23□□□□□ -2.05
CLASP1-215ENST00000541377 KRTAP20-2Q3LI61 65 aa2.22□□□□□ -2.05
CLASP1-215ENST00000541377 USH2AO75445 5202 aa2.16□□□□□ -2.06
CLASP1-215ENST00000541377 KRTAP4-6Q9BYQ5 205 aa2.06□□□□□ -2.08
CLASP1-215ENST00000541377 KRTAP4-12Q9BQ66 201 aa2.04□□□□□ -2.08
CLASP1-215ENST00000541377 KRTAP4-11Q9BYQ6 195 aa2.04□□□□□ -2.08
CLASP1-215ENST00000541377 KRTAP4-2Q9BYR5 136 aa2.04□□□□□ -2.08
CLASP1-215ENST00000541377 OBSCNQ5VST9 7968 aa2.02□□□□□ -2.09
CLASP1-215ENST00000541377 MACF1Q9UPN3 7388 aaKnown RBP2.02□□□□□ -2.09
CLASP1-215ENST00000541377 SSPOA2VEC9 5147 aa2.01□□□□□ -2.09
CLASP1-215ENST00000541377 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
CLASP1-215ENST00000541377 FCGBPQ9Y6R7 5405 aaPredicted RBP1.96□□□□□ -2.1
CLASP1-215ENST00000541377 KRTAP9-6A8MVA2 160 aa1.95□□□□□ -2.1
CLASP1-215ENST00000541377 DSTQ03001 7570 aaKnown RBP1.93□□□□□ -2.1
CLASP1-215ENST00000541377 KMT2DO14686 5537 aa1.91□□□□□ -2.1
CLASP1-215ENST00000541377 NEBP20929 6669 aa1.89□□□□□ -2.11
CLASP1-215ENST00000541377 KRTAP5-9P26371 169 aa1.85□□□□□ -2.11
CLASP1-215ENST00000541377 MUC12Q9UKN1 5478 aa1.85□□□□□ -2.11
CLASP1-215ENST00000541377 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.12
CLASP1-215ENST00000541377 MDN1Q9NU22 5596 aa1.82□□□□□ -2.12
CLASP1-215ENST00000541377 KRTAP5-4Q6L8H1 288 aa1.82□□□□□ -2.12
CLASP1-215ENST00000541377 KRTAP5-5Q701N2 237 aaPredicted RBP1.74□□□□□ -2.13
CLASP1-215ENST00000541377 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
CLASP1-215ENST00000541377 GPR98Q8WXG9 6306 aa1.69□□□□□ -2.14
CLASP1-215ENST00000541377 KRTAP5-3Q6L8H2 238 aa1.63□□□□□ -2.15
CLASP1-215ENST00000541377 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
CLASP1-215ENST00000541377 MUC5ACP98088 5654 aa1.48□□□□□ -2.17
CLASP1-215ENST00000541377 HMCN1Q96RW7 5635 aa1.46□□□□□ -2.18
CLASP1-215ENST00000541377 AHNAK2Q8IVF2 5795 aa1.44□□□□□ -2.18
CLASP1-215ENST00000541377 MUC5BQ9HC84 5762 aaPredicted RBP1.28□□□□□ -2.2
CLASP1-215ENST00000541377 KRTAP5-2Q701N4 177 aa1.27□□□□□ -2.21
CLASP1-215ENST00000541377 KRTAP5-10Q6L8G5 202 aa1.22□□□□□ -2.21
CLASP1-215ENST00000541377 KRTAP5-1Q6L8H4 278 aa1.17□□□□□ -2.22
CLASP1-215ENST00000541377 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
CLASP1-215ENST00000541377 KRTAP5-11Q6L8G4 156 aa1.16□□□□□ -2.22
CLASP1-215ENST00000541377 AHNAKQ09666 5890 aaKnown RBP1.15□□□□□ -2.22
CLASP1-215ENST00000541377 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.14□□□□□ -2.23
CLASP1-215ENST00000541377 KRTAP21-2Q3LI59 83 aa1.09□□□□□ -2.24
CLASP1-215ENST00000541377 KRTAP5-7Q6L8G8 165 aa1.06□□□□□ -2.24
CLASP1-215ENST00000541377 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 49.5 ms