RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 MUC12Q9UKN1 5478 aa5.94□□□□□ -1.46
SPIDR-227ENST00000541342 CRCT1Q9UGL9 99 aa5.92□□□□□ -1.46
SPIDR-227ENST00000541342 KRTAP2-3P0C7H8 128 aa5.89□□□□□ -1.47
SPIDR-227ENST00000541342 KRTAP2-4Q9BYR9 128 aa5.89□□□□□ -1.47
SPIDR-227ENST00000541342 KRTAP2-1Q9BYU5 128 aa5.89□□□□□ -1.47
SPIDR-227ENST00000541342 KRTAP19-4Q3LI73 84 aa5.83□□□□□ -1.48
SPIDR-227ENST00000541342 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
SPIDR-227ENST00000541342 SPRR2FQ96RM1 72 aa5.79□□□□□ -1.48
SPIDR-227ENST00000541342 KRTAP19-3Q7Z4W3 81 aa5.77□□□□□ -1.49
SPIDR-227ENST00000541342 MT1GP13640 62 aa5.71□□□□□ -1.5
SPIDR-227ENST00000541342 MT1MQ8N339 61 aa5.7□□□□□ -1.5
SPIDR-227ENST00000541342 KRTAP4-3Q9BYR4 195 aa5.7□□□□□ -1.5
SPIDR-227ENST00000541342 LCE5AQ5TCM9 118 aa5.65□□□□□ -1.5
SPIDR-227ENST00000541342 MDN1Q9NU22 5596 aa5.64□□□□□ -1.51
SPIDR-227ENST00000541342 KRTAP5-9P26371 169 aa5.63□□□□□ -1.51
SPIDR-227ENST00000541342 LOC100996750A0A140TA64 210 aa5.57□□□□□ -1.52
SPIDR-227ENST00000541342 LCE1AQ5T7P2 110 aa5.51□□□□□ -1.53
SPIDR-227ENST00000541342 DSTQ03001 7570 aaKnown RBP5.5□□□□□ -1.53
SPIDR-227ENST00000541342 KRTAP9-6A0A140TA67 174 aa5.5□□□□□ -1.53
SPIDR-227ENST00000541342 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.48□□□□□ -1.53
SPIDR-227ENST00000541342 SPRR2EP22531 72 aa5.41□□□□□ -1.54
SPIDR-227ENST00000541342 SPRR2BP35325 72 aa5.41□□□□□ -1.54
SPIDR-227ENST00000541342 SPRR2AP35326 72 aa5.41□□□□□ -1.54
SPIDR-227ENST00000541342 KRTAP6-3Q3LI67 103 aa5.38□□□□□ -1.55
SPIDR-227ENST00000541342 SPRR2DP22532 72 aa5.2□□□□□ -1.58
SPIDR-227ENST00000541342 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
SPIDR-227ENST00000541342 KRTAP5-5Q701N2 237 aaPredicted RBP5.13□□□□□ -1.59
SPIDR-227ENST00000541342 KRTAP9-7A8MTY7 169 aa5.08□□□□□ -1.6
SPIDR-227ENST00000541342 NEBP20929 6669 aa5.08□□□□□ -1.6
SPIDR-227ENST00000541342 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
SPIDR-227ENST00000541342 KRTAP6-1Q3LI64 71 aa5.07□□□□□ -1.6
SPIDR-227ENST00000541342 KRTAP4-9Q9BYQ8 210 aa5.05□□□□□ -1.6
SPIDR-227ENST00000541342 MT1AP04731 61 aa5.04□□□□□ -1.6
SPIDR-227ENST00000541342 SYNE1Q8NF91 8797 aaKnown RBP4.94□□□□□ -1.62
SPIDR-227ENST00000541342 LCE3DQ9BYE3 92 aa4.79□□□□□ -1.64
SPIDR-227ENST00000541342 KRTAP9-4Q9BYQ2 154 aa4.79□□□□□ -1.64
SPIDR-227ENST00000541342 KRTAP5-4Q6L8H1 288 aa4.76□□□□□ -1.65
SPIDR-227ENST00000541342 LCE3EQ5T5B0 92 aa4.73□□□□□ -1.65
SPIDR-227ENST00000541342 PRM1P04553 51 aa4.63□□□□□ -1.67
SPIDR-227ENST00000541342 KRTAP6-2Q3LI66 62 aa4.62□□□□□ -1.67
SPIDR-227ENST00000541342 KRTAP4-6Q9BYQ5 205 aa4.58□□□□□ -1.68
SPIDR-227ENST00000541342 KRTAP2-2Q9BYT5 123 aa4.57□□□□□ -1.68
SPIDR-227ENST00000541342 MT4P47944 62 aa4.56□□□□□ -1.68
SPIDR-227ENST00000541342 LCE4AQ5TA78 99 aa4.56□□□□□ -1.68
SPIDR-227ENST00000541342 MT3P25713 68 aa4.54□□□□□ -1.68
SPIDR-227ENST00000541342 KRTAP20-1Q3LI63 56 aa4.5□□□□□ -1.69
SPIDR-227ENST00000541342 HMCN1Q96RW7 5635 aa4.47□□□□□ -1.69
SPIDR-227ENST00000541342 KRTAP20-2Q3LI61 65 aa4.46□□□□□ -1.7
SPIDR-227ENST00000541342 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
SPIDR-227ENST00000541342 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
SPIDR-227ENST00000541342 KRTAP5-2Q701N4 177 aa4.36□□□□□ -1.71
SPIDR-227ENST00000541342 KRTAP5-3Q6L8H2 238 aa4.29□□□□□ -1.72
SPIDR-227ENST00000541342 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
SPIDR-227ENST00000541342 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
SPIDR-227ENST00000541342 MUC5ACP98088 5654 aa3.81□□□□□ -1.8
SPIDR-227ENST00000541342 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
SPIDR-227ENST00000541342 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
SPIDR-227ENST00000541342 LCE1BQ5T7P3 118 aa3.71□□□□□ -1.82
SPIDR-227ENST00000541342 KRTAP5-10Q6L8G5 202 aa3.7□□□□□ -1.82
SPIDR-227ENST00000541342 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
SPIDR-227ENST00000541342 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
SPIDR-227ENST00000541342 LCE1CQ5T751 118 aa3.64□□□□□ -1.83
SPIDR-227ENST00000541342 KRTAP5-7Q6L8G8 165 aa3.55□□□□□ -1.84
SPIDR-227ENST00000541342 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
SPIDR-227ENST00000541342 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
SPIDR-227ENST00000541342 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
SPIDR-227ENST00000541342 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
SPIDR-227ENST00000541342 KRTAP9-9Q9BYP9 154 aa3.19□□□□□ -1.9
SPIDR-227ENST00000541342 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
SPIDR-227ENST00000541342 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
SPIDR-227ENST00000541342 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
SPIDR-227ENST00000541342 KRTAP21-1Q3LI58 79 aa2.94□□□□□ -1.94
SPIDR-227ENST00000541342 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
SPIDR-227ENST00000541342 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
SPIDR-227ENST00000541342 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
SPIDR-227ENST00000541342 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
SPIDR-227ENST00000541342 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 103.8 ms