RNA–Protein interactions for RNA: ENST00000541167.5

RAP1B-223, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-223	ENST00000541167	RPS28	P62857	69 aa	Known RBP	7.33	□□□□□ -1.24
RAP1B-223	ENST00000541167	LCE5A	Q5TCM9	118 aa		7.31	□□□□□ -1.24
RAP1B-223	ENST00000541167		A6NED7	52 aa		7.3	□□□□□ -1.24
RAP1B-223	ENST00000541167	DST	Q03001	7570 aa	Known RBP	7.21	□□□□□ -1.26
RAP1B-223	ENST00000541167	MT1G	P13640	62 aa		7.19	□□□□□ -1.26
RAP1B-223	ENST00000541167	KRTAP25-1	Q3LHN0	102 aa		7.18	□□□□□ -1.26
RAP1B-223	ENST00000541167	MT1L	Q93083	61 aa		7.16	□□□□□ -1.26
RAP1B-223	ENST00000541167	PP632	Q6XCG6	107 aa		7.15	□□□□□ -1.26
RAP1B-223	ENST00000541167	KRTAP4-9	Q9BYQ8	210 aa		7.1	□□□□□ -1.27
RAP1B-223	ENST00000541167	KRTAP12-3	P60328	96 aa		7.08	□□□□□ -1.28
RAP1B-223	ENST00000541167	MT1M	Q8N339	61 aa		7.08	□□□□□ -1.28
RAP1B-223	ENST00000541167	CDC42SE1	Q9NRR8	79 aa		7	□□□□□ -1.29
RAP1B-223	ENST00000541167	LOC100996750	A0A140TA64	210 aa		6.91	□□□□□ -1.3
RAP1B-223	ENST00000541167	KRTAP4-6	Q9BYQ5	205 aa		6.91	□□□□□ -1.3
RAP1B-223	ENST00000541167	KRTAP4-3	Q9BYR4	195 aa		6.91	□□□□□ -1.3
RAP1B-223	ENST00000541167	KRTAP23-1	A1A580	65 aa		6.9	□□□□□ -1.3
RAP1B-223	ENST00000541167	ROMO1	P60602	79 aa		6.89	□□□□□ -1.31
RAP1B-223	ENST00000541167	LCE1D	Q5T752	114 aa		6.85	□□□□□ -1.31
RAP1B-223	ENST00000541167	KRTAP4-7	Q9BYR0	210 aa		6.83	□□□□□ -1.32
RAP1B-223	ENST00000541167	HMCN1	Q96RW7	5635 aa		6.71	□□□□□ -1.34
RAP1B-223	ENST00000541167	KRTAP5-10	Q6L8G5	202 aa		6.7	□□□□□ -1.34
RAP1B-223	ENST00000541167	MT4	P47944	62 aa		6.69	□□□□□ -1.34
RAP1B-223	ENST00000541167	KRTAP15-1	Q3LI76	137 aa		6.69	□□□□□ -1.34
RAP1B-223	ENST00000541167	LCE4A	Q5TA78	99 aa		6.68	□□□□□ -1.34
RAP1B-223	ENST00000541167	AHNAK2	Q8IVF2	5795 aa		6.66	□□□□□ -1.34
RAP1B-223	ENST00000541167	KRTAP19-4	Q3LI73	84 aa		6.66	□□□□□ -1.34
RAP1B-223	ENST00000541167	KRTAP5-4	Q6L8H1	288 aa		6.58	□□□□□ -1.36
RAP1B-223	ENST00000541167	KRTAP5-7	Q6L8G8	165 aa		6.56	□□□□□ -1.36
RAP1B-223	ENST00000541167	LCE3C	Q5T5A8	94 aa		6.54	□□□□□ -1.36
RAP1B-223	ENST00000541167	BRK1	Q8WUW1	75 aa		6.53	□□□□□ -1.36
RAP1B-223	ENST00000541167	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.45	□□□□□ -1.38
RAP1B-223	ENST00000541167	KRTAP5-3	Q6L8H2	238 aa		6.4	□□□□□ -1.38
RAP1B-223	ENST00000541167	SPRR5	A0A1B0GTR4	108 aa		6.39	□□□□□ -1.39
RAP1B-223	ENST00000541167	KRTAP12-4	P60329	112 aa		6.24	□□□□□ -1.41
RAP1B-223	ENST00000541167	KRTAP20-2	Q3LI61	65 aa		6.22	□□□□□ -1.41
RAP1B-223	ENST00000541167	PRO0628	Q9UI54	55 aa		6.2	□□□□□ -1.42
RAP1B-223	ENST00000541167	KRTAP9-6	A8MVA2	160 aa		6.15	□□□□□ -1.42
RAP1B-223	ENST00000541167	SYNE1	Q8NF91	8797 aa	Known RBP	6.13	□□□□□ -1.43
RAP1B-223	ENST00000541167	PMAIP1	Q13794	54 aa		6.12	□□□□□ -1.43
RAP1B-223	ENST00000541167	MT1A	P04731	61 aa		6.1	□□□□□ -1.43
RAP1B-223	ENST00000541167	SVIP	Q8NHG7	77 aa		6.09	□□□□□ -1.43
RAP1B-223	ENST00000541167	KRTAP6-1	Q3LI64	71 aa		6.05	□□□□□ -1.44
RAP1B-223	ENST00000541167	KRTAP4-12	Q9BQ66	201 aa		6.03	□□□□□ -1.44
RAP1B-223	ENST00000541167	KRTAP9-9	Q9BYP9	154 aa		5.9	□□□□□ -1.46
RAP1B-223	ENST00000541167	KRTAP9-4	Q9BYQ2	154 aa		5.9	□□□□□ -1.46
RAP1B-223	ENST00000541167	PRAC1	Q96KF2	57 aa		5.87	□□□□□ -1.47
RAP1B-223	ENST00000541167	KRTAP5-2	Q701N4	177 aa		5.82	□□□□□ -1.48
RAP1B-223	ENST00000541167	KRTAP6-2	Q3LI66	62 aa		5.73	□□□□□ -1.49
RAP1B-223	ENST00000541167	KRTAP4-11	Q9BYQ6	195 aa		5.73	□□□□□ -1.49
RAP1B-223	ENST00000541167	KTN1-AS1	Q86SY8	53 aa		5.72	□□□□□ -1.49
RAP1B-223	ENST00000541167	AHNAK	Q09666	5890 aa	Known RBP	5.68	□□□□□ -1.5
RAP1B-223	ENST00000541167	MUC5AC	P98088	5654 aa		5.66	□□□□□ -1.5
RAP1B-223	ENST00000541167	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.59	□□□□□ -1.52
RAP1B-223	ENST00000541167	KRTAP5-8	O75690	187 aa		5.57	□□□□□ -1.52
RAP1B-223	ENST00000541167	MT3	P25713	68 aa		5.57	□□□□□ -1.52
RAP1B-223	ENST00000541167	KRTAP4-2	Q9BYR5	136 aa		5.38	□□□□□ -1.55
RAP1B-223	ENST00000541167	OBSCN	Q5VST9	7968 aa		5.36	□□□□□ -1.55
RAP1B-223	ENST00000541167	KRTAP5-1	Q6L8H4	278 aa		5.16	□□□□□ -1.58
RAP1B-223	ENST00000541167	LCE1E	Q5T753	118 aa		5.03	□□□□□ -1.6
RAP1B-223	ENST00000541167	LUZP6	Q538Z0	58 aa		4.93	□□□□□ -1.62
RAP1B-223	ENST00000541167		H3BS24	57 aa		4.81	□□□□□ -1.64
RAP1B-223	ENST00000541167	LCE1B	Q5T7P3	118 aa		4.77	□□□□□ -1.65
RAP1B-223	ENST00000541167	LCE3D	Q9BYE3	92 aa		4.77	□□□□□ -1.65
RAP1B-223	ENST00000541167	LCE1C	Q5T751	118 aa		4.67	□□□□□ -1.66
RAP1B-223	ENST00000541167	LCE3E	Q5T5B0	92 aa		4.53	□□□□□ -1.68
RAP1B-223	ENST00000541167	NDUFAF8	A1L188	74 aa		4.47	□□□□□ -1.69
RAP1B-223	ENST00000541167	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.28	□□□□□ -1.72
RAP1B-223	ENST00000541167	KRTAP5-11	Q6L8G4	156 aa		4.22	□□□□□ -1.73
RAP1B-223	ENST00000541167		A0A0A0MQY5	61 aa		4.07	□□□□□ -1.76
RAP1B-223	ENST00000541167	LCE1F	Q5T754	118 aa		4.03	□□□□□ -1.76
RAP1B-223	ENST00000541167	PHGR1	C9JFL3	82 aa		3.97	□□□□□ -1.77
RAP1B-223	ENST00000541167	KRTAP21-2	Q3LI59	83 aa		3.96	□□□□□ -1.78
RAP1B-223	ENST00000541167	INE1	O15225	51 aa		3.76	□□□□□ -1.81
RAP1B-223	ENST00000541167	KRTAP4-4	Q9BYR3	166 aa		3.63	□□□□□ -1.83
RAP1B-223	ENST00000541167	PRM1	P04553	51 aa		3.55	□□□□□ -1.84
RAP1B-223	ENST00000541167	MUC19	Q7Z5P9	8384 aa		3.32	□□□□□ -1.88
RAP1B-223	ENST00000541167	KRTAP21-1	Q3LI58	79 aa		3.04	□□□□□ -1.92
RAP1B-223	ENST00000541167	MUC16	Q8WXI7	14507 aa		2.33	□□□□□ -2.04

Retrieved 78 of 20,778 RNA–protein pairs in 92.7 ms