RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 ANAPC13Q9BS18 74 aa9.21□□□□□ -0.94
CHFR-218ENST00000540963 A0A1B0GU69 56 aa9.18□□□□□ -0.94
CHFR-218ENST00000540963 C10orf95Q9H7T3 257 aa9.15□□□□□ -0.94
CHFR-218ENST00000540963 SMIM26A0A096LP01 95 aa9.14□□□□□ -0.95
CHFR-218ENST00000540963 LCE3AQ5TA76 89 aa9.11□□□□□ -0.95
CHFR-218ENST00000540963 KRTAP20-2Q3LI61 65 aa9.07□□□□□ -0.96
CHFR-218ENST00000540963 SPRR5A0A1B0GTR4 108 aa9.01□□□□□ -0.97
CHFR-218ENST00000540963 CCDC179H3BU77 68 aa8.98□□□□□ -0.97
CHFR-218ENST00000540963 TNP1P09430 55 aa8.96□□□□□ -0.98
CHFR-218ENST00000540963 PCP4P48539 62 aa8.91□□□□□ -0.98
CHFR-218ENST00000540963 KRTAP5-5Q701N2 237 aaPredicted RBP8.89□□□□□ -0.99
CHFR-218ENST00000540963 KRTAP4-7Q9BYR0 210 aa8.89□□□□□ -0.99
CHFR-218ENST00000540963 KRTAP12-4P60329 112 aa8.84□□□□□ -0.99
CHFR-218ENST00000540963 LINC01558Q9Y6Z2 57 aa8.82□□□□□ -1
CHFR-218ENST00000540963 ATP5EP56381 51 aaPredicted RBP8.75□□□□□ -1.01
CHFR-218ENST00000540963 PRR15LQ9BU68 103 aa8.75□□□□□ -1.01
CHFR-218ENST00000540963 KRTAP12-3P60328 96 aa8.74□□□□□ -1.01
CHFR-218ENST00000540963 TMEM258P61165 79 aa8.74□□□□□ -1.01
CHFR-218ENST00000540963 SYNE1Q8NF91 8797 aaKnown RBP8.61□□□□□ -1.03
CHFR-218ENST00000540963 UQCR11O14957 56 aa8.55□□□□□ -1.04
CHFR-218ENST00000540963 LOC100996750A0A140TA64 210 aa8.46□□□□□ -1.06
CHFR-218ENST00000540963 KRTAP4-11Q9BYQ6 195 aa8.46□□□□□ -1.06
CHFR-218ENST00000540963 KRTAP25-1Q3LHN0 102 aa8.38□□□□□ -1.07
CHFR-218ENST00000540963 MIR22HGQ0VDD5 57 aa8.37□□□□□ -1.07
CHFR-218ENST00000540963 RPS28P62857 69 aaKnown RBP8.36□□□□□ -1.07
CHFR-218ENST00000540963 KRTAP19-4Q3LI73 84 aa8.36□□□□□ -1.07
CHFR-218ENST00000540963 KRTAP5-2Q701N4 177 aa8.28□□□□□ -1.08
CHFR-218ENST00000540963 AHNAKQ09666 5890 aaKnown RBP8.23□□□□□ -1.09
CHFR-218ENST00000540963 V9GYY9 64 aa8.19□□□□□ -1.1
CHFR-218ENST00000540963 MUC5ACP98088 5654 aa8.19□□□□□ -1.1
CHFR-218ENST00000540963 KRTAP5-8O75690 187 aa8.18□□□□□ -1.1
CHFR-218ENST00000540963 PSPHP1O15172 72 aa8.15□□□□□ -1.1
CHFR-218ENST00000540963 MUC5BQ9HC84 5762 aaPredicted RBP8.14□□□□□ -1.11
CHFR-218ENST00000540963 Q1T7F1 81 aa8.1□□□□□ -1.11
CHFR-218ENST00000540963 KRTAP23-1A1A580 65 aa8.08□□□□□ -1.12
CHFR-218ENST00000540963 K7ERS5 55 aa8.08□□□□□ -1.12
CHFR-218ENST00000540963 KRTAP15-1Q3LI76 137 aa8.08□□□□□ -1.12
CHFR-218ENST00000540963 MT1AP04731 61 aa8.06□□□□□ -1.12
CHFR-218ENST00000540963 LCE3CQ5T5A8 94 aa8.03□□□□□ -1.12
CHFR-218ENST00000540963 KRTAP6-1Q3LI64 71 aa8.01□□□□□ -1.13
CHFR-218ENST00000540963 OBSCNQ5VST9 7968 aa7.93□□□□□ -1.14
CHFR-218ENST00000540963 KRTAP9-9Q9BYP9 154 aa7.9□□□□□ -1.14
CHFR-218ENST00000540963 KRTAP9-4Q9BYQ2 154 aa7.86□□□□□ -1.15
CHFR-218ENST00000540963 KRTAP6-2Q3LI66 62 aa7.79□□□□□ -1.16
CHFR-218ENST00000540963 A6NED7 52 aa7.76□□□□□ -1.17
CHFR-218ENST00000540963 KRTAP9-6A8MVA2 160 aa7.73□□□□□ -1.17
CHFR-218ENST00000540963 CDC42SE1Q9NRR8 79 aa7.71□□□□□ -1.18
CHFR-218ENST00000540963 ROMO1P60602 79 aa7.65□□□□□ -1.18
CHFR-218ENST00000540963 KRTAP5-1Q6L8H4 278 aa7.54□□□□□ -1.2
CHFR-218ENST00000540963 MT3P25713 68 aa7.42□□□□□ -1.22
CHFR-218ENST00000540963 BRK1Q8WUW1 75 aa7.4□□□□□ -1.22
CHFR-218ENST00000540963 PRO0628Q9UI54 55 aa7.16□□□□□ -1.26
CHFR-218ENST00000540963 PMAIP1Q13794 54 aa7.03□□□□□ -1.28
CHFR-218ENST00000540963 LCE1EQ5T753 118 aa7.03□□□□□ -1.28
CHFR-218ENST00000540963 KTN1-AS1Q86SY8 53 aa6.66□□□□□ -1.34
CHFR-218ENST00000540963 KRTAP4-2Q9BYR5 136 aa6.64□□□□□ -1.35
CHFR-218ENST00000540963 LCE1BQ5T7P3 118 aa6.55□□□□□ -1.36
CHFR-218ENST00000540963 LCE1CQ5T751 118 aa6.51□□□□□ -1.37
CHFR-218ENST00000540963 PRAC1Q96KF2 57 aa6.48□□□□□ -1.37
CHFR-218ENST00000540963 SVIPQ8NHG7 77 aa6.26□□□□□ -1.41
CHFR-218ENST00000540963 KRTAP4-12Q9BQ66 201 aa6.19□□□□□ -1.42
CHFR-218ENST00000540963 KRTAP5-11Q6L8G4 156 aa6□□□□□ -1.45
CHFR-218ENST00000540963 LCE1FQ5T754 118 aa5.99□□□□□ -1.45
CHFR-218ENST00000540963 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.85□□□□□ -1.47
CHFR-218ENST00000540963 LCE3DQ9BYE3 92 aa5.71□□□□□ -1.5
CHFR-218ENST00000540963 PHGR1C9JFL3 82 aa5.66□□□□□ -1.5
CHFR-218ENST00000540963 LUZP6Q538Z0 58 aa5.53□□□□□ -1.52
CHFR-218ENST00000540963 LCE3EQ5T5B0 92 aa5.34□□□□□ -1.55
CHFR-218ENST00000540963 KRTAP21-2Q3LI59 83 aa5.31□□□□□ -1.56
CHFR-218ENST00000540963 NDUFAF8A1L188 74 aa5.06□□□□□ -1.6
CHFR-218ENST00000540963 MUC19Q7Z5P9 8384 aa4.91□□□□□ -1.62
CHFR-218ENST00000540963 KRTAP4-4Q9BYR3 166 aa4.89□□□□□ -1.63
CHFR-218ENST00000540963 A0A0A0MQY5 61 aa4.52□□□□□ -1.69
CHFR-218ENST00000540963 KRTAP21-1Q3LI58 79 aa4.35□□□□□ -1.71
CHFR-218ENST00000540963 INE1O15225 51 aa4.31□□□□□ -1.72
CHFR-218ENST00000540963 H3BS24 57 aa3.95□□□□□ -1.78
CHFR-218ENST00000540963 PRM1P04553 51 aa3.93□□□□□ -1.78
CHFR-218ENST00000540963 MUC16Q8WXI7 14507 aa3.51□□□□□ -1.85
Retrieved 78 of 20,778 RNA–protein pairs in 55.5 ms