RNA–Protein interactions for RNA: ENST00000540373.1

CADM1-208, Transcript of cell adhesion molecule 1, humanhuman

TSL 2

Gene CADM1, Length 335 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-208ENST00000540373 LINC01558Q9Y6Z2 57 aa3.22□□□□□ -1.89
CADM1-208ENST00000540373 MT1EP04732 61 aa3.21□□□□□ -1.9
CADM1-208ENST00000540373 SMIM26A0A096LP01 95 aa3.2□□□□□ -1.9
CADM1-208ENST00000540373 C10orf95Q9H7T3 257 aa3.2□□□□□ -1.9
CADM1-208ENST00000540373 TMEM258P61165 79 aa3.19□□□□□ -1.9
CADM1-208ENST00000540373 KRTAP19-5Q3LI72 72 aa3.17□□□□□ -1.9
CADM1-208ENST00000540373 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
CADM1-208ENST00000540373 KRTAP19-3Q7Z4W3 81 aa3.16□□□□□ -1.9
CADM1-208ENST00000540373 PRR15LQ9BU68 103 aa3.15□□□□□ -1.91
CADM1-208ENST00000540373 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
CADM1-208ENST00000540373 A0A0A0MQY5 61 aa3.09□□□□□ -1.91
CADM1-208ENST00000540373 DSTQ03001 7570 aaKnown RBP3.09□□□□□ -1.92
CADM1-208ENST00000540373 UQCR11O14957 56 aa3.08□□□□□ -1.92
CADM1-208ENST00000540373 TNP1P09430 55 aa3.08□□□□□ -1.92
CADM1-208ENST00000540373 MT1GP13640 62 aa3.08□□□□□ -1.92
CADM1-208ENST00000540373 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
CADM1-208ENST00000540373 MT1LQ93083 61 aa3.08□□□□□ -1.92
CADM1-208ENST00000540373 MT1MQ8N339 61 aa3.05□□□□□ -1.92
CADM1-208ENST00000540373 PSPHP1O15172 72 aa3.03□□□□□ -1.92
CADM1-208ENST00000540373 MIR22HGQ0VDD5 57 aa3.03□□□□□ -1.92
CADM1-208ENST00000540373 KRTAP4-3Q9BYR4 195 aa3.03□□□□□ -1.92
CADM1-208ENST00000540373 MT3P25713 68 aa3.02□□□□□ -1.93
CADM1-208ENST00000540373 Q1T7F1 81 aa3.02□□□□□ -1.93
CADM1-208ENST00000540373 PCP4P48539 62 aa3□□□□□ -1.93
CADM1-208ENST00000540373 PP632Q6XCG6 107 aa3□□□□□ -1.93
CADM1-208ENST00000540373 SVIPQ8NHG7 77 aa3□□□□□ -1.93
CADM1-208ENST00000540373 KRTAP12-3P60328 96 aa2.97□□□□□ -1.93
CADM1-208ENST00000540373 V9GYY9 64 aa2.97□□□□□ -1.93
CADM1-208ENST00000540373 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
CADM1-208ENST00000540373 KRTAP25-1Q3LHN0 102 aa2.93□□□□□ -1.94
CADM1-208ENST00000540373 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.95
CADM1-208ENST00000540373 K7ERS5 55 aa2.89□□□□□ -1.95
CADM1-208ENST00000540373 RPS28P62857 69 aaKnown RBP2.89□□□□□ -1.95
CADM1-208ENST00000540373 A6NED7 52 aa2.88□□□□□ -1.95
CADM1-208ENST00000540373 MT4P47944 62 aa2.88□□□□□ -1.95
CADM1-208ENST00000540373 HMCN1Q96RW7 5635 aa2.83□□□□□ -1.96
CADM1-208ENST00000540373 KRTAP5-5Q701N2 237 aaPredicted RBP2.82□□□□□ -1.96
CADM1-208ENST00000540373 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
CADM1-208ENST00000540373 CDC42SE1Q9NRR8 79 aa2.78□□□□□ -1.96
CADM1-208ENST00000540373 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
CADM1-208ENST00000540373 ROMO1P60602 79 aa2.77□□□□□ -1.97
CADM1-208ENST00000540373 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
CADM1-208ENST00000540373 LCE3CQ5T5A8 94 aa2.76□□□□□ -1.97
CADM1-208ENST00000540373 KRTAP20-2Q3LI61 65 aa2.71□□□□□ -1.98
CADM1-208ENST00000540373 AHNAK2Q8IVF2 5795 aa2.69□□□□□ -1.98
CADM1-208ENST00000540373 SPRR5A0A1B0GTR4 108 aa2.68□□□□□ -1.98
CADM1-208ENST00000540373 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
CADM1-208ENST00000540373 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
CADM1-208ENST00000540373 SYNE1Q8NF91 8797 aaKnown RBP2.65□□□□□ -1.98
CADM1-208ENST00000540373 KRTAP12-4P60329 112 aa2.65□□□□□ -1.99
CADM1-208ENST00000540373 KRTAP6-1Q3LI64 71 aa2.62□□□□□ -1.99
CADM1-208ENST00000540373 MT1AP04731 61 aa2.61□□□□□ -1.99
CADM1-208ENST00000540373 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
CADM1-208ENST00000540373 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
CADM1-208ENST00000540373 PRAC1Q96KF2 57 aa2.53□□□□□ -2
CADM1-208ENST00000540373 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
CADM1-208ENST00000540373 BRK1Q8WUW1 75 aa2.51□□□□□ -2.01
CADM1-208ENST00000540373 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
CADM1-208ENST00000540373 NDUFAF8A1L188 74 aa2.47□□□□□ -2.01
CADM1-208ENST00000540373 OBSCNQ5VST9 7968 aa2.45□□□□□ -2.02
CADM1-208ENST00000540373 KRTAP5-8O75690 187 aa2.4□□□□□ -2.03
CADM1-208ENST00000540373 PMAIP1Q13794 54 aa2.36□□□□□ -2.03
CADM1-208ENST00000540373 PRO0628Q9UI54 55 aa2.2□□□□□ -2.06
CADM1-208ENST00000540373 MUC5ACP98088 5654 aa2.19□□□□□ -2.06
CADM1-208ENST00000540373 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
CADM1-208ENST00000540373 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.06
CADM1-208ENST00000540373 KTN1-AS1Q86SY8 53 aa2.1□□□□□ -2.07
CADM1-208ENST00000540373 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
CADM1-208ENST00000540373 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
CADM1-208ENST00000540373 LCE3DQ9BYE3 92 aa2.01□□□□□ -2.09
CADM1-208ENST00000540373 LUZP6Q538Z0 58 aa1.84□□□□□ -2.11
CADM1-208ENST00000540373 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
CADM1-208ENST00000540373 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
CADM1-208ENST00000540373 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
CADM1-208ENST00000540373 PRM1P04553 51 aa1.44□□□□□ -2.18
CADM1-208ENST00000540373 INE1O15225 51 aa1.2□□□□□ -2.22
CADM1-208ENST00000540373 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
CADM1-208ENST00000540373 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 237.5 ms