RNA–Protein interactions for RNA: ENST00000540209.5

RAP1B-221, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-221ENST00000540209 PRR15LQ9BU68 103 aa6.96□□□□□ -1.3
RAP1B-221ENST00000540209 C10orf95Q9H7T3 257 aa6.96□□□□□ -1.3
RAP1B-221ENST00000540209 TNP1P09430 55 aa6.92□□□□□ -1.3
RAP1B-221ENST00000540209 PP632Q6XCG6 107 aa6.92□□□□□ -1.3
RAP1B-221ENST00000540209 LINC01558Q9Y6Z2 57 aa6.92□□□□□ -1.3
RAP1B-221ENST00000540209 LCE3AQ5TA76 89 aa6.91□□□□□ -1.3
RAP1B-221ENST00000540209 MT1LQ93083 61 aa6.9□□□□□ -1.3
RAP1B-221ENST00000540209 SVIPQ8NHG7 77 aa6.89□□□□□ -1.31
RAP1B-221ENST00000540209 MT1MQ8N339 61 aa6.88□□□□□ -1.31
RAP1B-221ENST00000540209 KRTAP4-2Q9BYR5 136 aa6.86□□□□□ -1.31
RAP1B-221ENST00000540209 TMEM258P61165 79 aa6.81□□□□□ -1.32
RAP1B-221ENST00000540209 KRTAP23-1A1A580 65 aa6.78□□□□□ -1.32
RAP1B-221ENST00000540209 HMCN1Q96RW7 5635 aa6.76□□□□□ -1.33
RAP1B-221ENST00000540209 UQCR11O14957 56 aa6.75□□□□□ -1.33
RAP1B-221ENST00000540209 MT4P47944 62 aa6.73□□□□□ -1.33
RAP1B-221ENST00000540209 KRTAP4-3Q9BYR4 195 aa6.72□□□□□ -1.33
RAP1B-221ENST00000540209 AHNAK2Q8IVF2 5795 aa6.72□□□□□ -1.33
RAP1B-221ENST00000540209 KRTAP4-11Q9BYQ6 195 aa6.71□□□□□ -1.34
RAP1B-221ENST00000540209 KRTAP5-10Q6L8G5 202 aa6.7□□□□□ -1.34
RAP1B-221ENST00000540209 KRTAP12-3P60328 96 aa6.64□□□□□ -1.35
RAP1B-221ENST00000540209 KRTAP5-4Q6L8H1 288 aa6.6□□□□□ -1.35
RAP1B-221ENST00000540209 MIR22HGQ0VDD5 57 aa6.58□□□□□ -1.36
RAP1B-221ENST00000540209 KRTAP25-1Q3LHN0 102 aa6.52□□□□□ -1.37
RAP1B-221ENST00000540209 KRTAP5-7Q6L8G8 165 aa6.51□□□□□ -1.37
RAP1B-221ENST00000540209 K7ERS5 55 aa6.44□□□□□ -1.38
RAP1B-221ENST00000540209 V9GYY9 64 aa6.44□□□□□ -1.38
RAP1B-221ENST00000540209 PSPHP1O15172 72 aa6.43□□□□□ -1.38
RAP1B-221ENST00000540209 Q1T7F1 81 aa6.42□□□□□ -1.38
RAP1B-221ENST00000540209 KRTAP5-3Q6L8H2 238 aa6.41□□□□□ -1.38
RAP1B-221ENST00000540209 KRTAP5-5Q701N2 237 aaPredicted RBP6.34□□□□□ -1.39
RAP1B-221ENST00000540209 SPRR5A0A1B0GTR4 108 aa6.26□□□□□ -1.41
RAP1B-221ENST00000540209 KRTAP20-2Q3LI61 65 aa6.22□□□□□ -1.41
RAP1B-221ENST00000540209 A6NED7 52 aa6.2□□□□□ -1.42
RAP1B-221ENST00000540209 KRTAP15-1Q3LI76 137 aa6.2□□□□□ -1.42
RAP1B-221ENST00000540209 KRTAP12-4P60329 112 aa6.13□□□□□ -1.43
RAP1B-221ENST00000540209 LCE3CQ5T5A8 94 aa6.12□□□□□ -1.43
RAP1B-221ENST00000540209 CDC42SE1Q9NRR8 79 aa6.12□□□□□ -1.43
RAP1B-221ENST00000540209 SYNE1Q8NF91 8797 aaKnown RBP6.07□□□□□ -1.44
RAP1B-221ENST00000540209 ROMO1P60602 79 aa6.02□□□□□ -1.45
RAP1B-221ENST00000540209 RPS28P62857 69 aaKnown RBP6.02□□□□□ -1.45
RAP1B-221ENST00000540209 MT1AP04731 61 aa5.87□□□□□ -1.47
RAP1B-221ENST00000540209 PCP4P48539 62 aa5.85□□□□□ -1.47
RAP1B-221ENST00000540209 KRTAP6-1Q3LI64 71 aa5.84□□□□□ -1.47
RAP1B-221ENST00000540209 KRTAP9-6A8MVA2 160 aa5.8□□□□□ -1.48
RAP1B-221ENST00000540209 KRTAP5-2Q701N4 177 aa5.79□□□□□ -1.48
RAP1B-221ENST00000540209 A0A0A0MQY5 61 aa5.68□□□□□ -1.5
RAP1B-221ENST00000540209 MUC5ACP98088 5654 aa5.65□□□□□ -1.51
RAP1B-221ENST00000540209 AHNAKQ09666 5890 aaKnown RBP5.64□□□□□ -1.51
RAP1B-221ENST00000540209 KRTAP5-8O75690 187 aa5.61□□□□□ -1.51
RAP1B-221ENST00000540209 MUC5BQ9HC84 5762 aaPredicted RBP5.59□□□□□ -1.51
RAP1B-221ENST00000540209 KRTAP6-2Q3LI66 62 aa5.58□□□□□ -1.52
RAP1B-221ENST00000540209 OBSCNQ5VST9 7968 aa5.49□□□□□ -1.53
RAP1B-221ENST00000540209 MT3P25713 68 aa5.36□□□□□ -1.55
RAP1B-221ENST00000540209 BRK1Q8WUW1 75 aa5.25□□□□□ -1.57
RAP1B-221ENST00000540209 KRTAP5-1Q6L8H4 278 aa5.18□□□□□ -1.58
RAP1B-221ENST00000540209 LCE1EQ5T753 118 aa4.95□□□□□ -1.62
RAP1B-221ENST00000540209 PMAIP1Q13794 54 aa4.92□□□□□ -1.62
RAP1B-221ENST00000540209 PRAC1Q96KF2 57 aa4.78□□□□□ -1.64
RAP1B-221ENST00000540209 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.65□□□□□ -1.67
RAP1B-221ENST00000540209 LCE1BQ5T7P3 118 aa4.62□□□□□ -1.67
RAP1B-221ENST00000540209 LCE1CQ5T751 118 aa4.6□□□□□ -1.67
RAP1B-221ENST00000540209 KRTAP5-11Q6L8G4 156 aa4.54□□□□□ -1.68
RAP1B-221ENST00000540209 PRO0628Q9UI54 55 aa4.47□□□□□ -1.69
RAP1B-221ENST00000540209 NDUFAF8A1L188 74 aa4.46□□□□□ -1.7
RAP1B-221ENST00000540209 LCE1FQ5T754 118 aa4.43□□□□□ -1.7
RAP1B-221ENST00000540209 LCE3DQ9BYE3 92 aa4.4□□□□□ -1.71
RAP1B-221ENST00000540209 KTN1-AS1Q86SY8 53 aa4.32□□□□□ -1.72
RAP1B-221ENST00000540209 LCE3EQ5T5B0 92 aa4.13□□□□□ -1.75
RAP1B-221ENST00000540209 LUZP6Q538Z0 58 aa4.02□□□□□ -1.77
RAP1B-221ENST00000540209 PHGR1C9JFL3 82 aa3.93□□□□□ -1.78
RAP1B-221ENST00000540209 KRTAP21-2Q3LI59 83 aa3.86□□□□□ -1.79
RAP1B-221ENST00000540209 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
RAP1B-221ENST00000540209 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
RAP1B-221ENST00000540209 PRM1P04553 51 aa3.08□□□□□ -1.92
RAP1B-221ENST00000540209 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
RAP1B-221ENST00000540209 INE1O15225 51 aa2.47□□□□□ -2.01
RAP1B-221ENST00000540209 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 112.1 ms