RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 MT4P47944 62 aa5.41□□□□□ -1.54
UBE3B-211ENST00000539843 A8MU10 97 aa5.37□□□□□ -1.55
UBE3B-211ENST00000539843 C10orf95Q9H7T3 257 aa5.37□□□□□ -1.55
UBE3B-211ENST00000539843 LCE3AQ5TA76 89 aa5.36□□□□□ -1.55
UBE3B-211ENST00000539843 PRR15LQ9BU68 103 aa5.36□□□□□ -1.55
UBE3B-211ENST00000539843 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
UBE3B-211ENST00000539843 HMCN1Q96RW7 5635 aa5.31□□□□□ -1.56
UBE3B-211ENST00000539843 ANAPC13Q9BS18 74 aa5.26□□□□□ -1.57
UBE3B-211ENST00000539843 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
UBE3B-211ENST00000539843 KRTAP4-3Q9BYR4 195 aa5.25□□□□□ -1.57
UBE3B-211ENST00000539843 AHNAK2Q8IVF2 5795 aa5.24□□□□□ -1.57
UBE3B-211ENST00000539843 ATP5EP56381 51 aaPredicted RBP5.22□□□□□ -1.57
UBE3B-211ENST00000539843 KRTAP12-3P60328 96 aa5.19□□□□□ -1.58
UBE3B-211ENST00000539843 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
UBE3B-211ENST00000539843 KRTAP5-10Q6L8G5 202 aa5.13□□□□□ -1.59
UBE3B-211ENST00000539843 LINC01558Q9Y6Z2 57 aa5.13□□□□□ -1.59
UBE3B-211ENST00000539843 UQCR11O14957 56 aa5.12□□□□□ -1.59
UBE3B-211ENST00000539843 CCDC179H3BU77 68 aa5.08□□□□□ -1.6
UBE3B-211ENST00000539843 KRTAP25-1Q3LHN0 102 aa5.04□□□□□ -1.6
UBE3B-211ENST00000539843 K7ERS5 55 aa5.03□□□□□ -1.6
UBE3B-211ENST00000539843 KRTAP12-4P60329 112 aa5.01□□□□□ -1.61
UBE3B-211ENST00000539843 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
UBE3B-211ENST00000539843 KRTAP20-2Q3LI61 65 aa5□□□□□ -1.61
UBE3B-211ENST00000539843 SPRR5A0A1B0GTR4 108 aa4.99□□□□□ -1.61
UBE3B-211ENST00000539843 KRTAP5-7Q6L8G8 165 aa4.99□□□□□ -1.61
UBE3B-211ENST00000539843 TMEM258P61165 79 aa4.97□□□□□ -1.61
UBE3B-211ENST00000539843 MIR22HGQ0VDD5 57 aa4.97□□□□□ -1.61
UBE3B-211ENST00000539843 KRTAP5-5Q701N2 237 aaPredicted RBP4.96□□□□□ -1.62
UBE3B-211ENST00000539843 KRTAP23-1A1A580 65 aa4.82□□□□□ -1.64
UBE3B-211ENST00000539843 V9GYY9 64 aa4.82□□□□□ -1.64
UBE3B-211ENST00000539843 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
UBE3B-211ENST00000539843 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
UBE3B-211ENST00000539843 LCE3CQ5T5A8 94 aa4.74□□□□□ -1.65
UBE3B-211ENST00000539843 PSPHP1O15172 72 aa4.73□□□□□ -1.65
UBE3B-211ENST00000539843 CDC42SE1Q9NRR8 79 aa4.67□□□□□ -1.66
UBE3B-211ENST00000539843 Q1T7F1 81 aa4.66□□□□□ -1.66
UBE3B-211ENST00000539843 A6NED7 52 aa4.63□□□□□ -1.67
UBE3B-211ENST00000539843 MT1AP04731 61 aa4.63□□□□□ -1.67
UBE3B-211ENST00000539843 RPS28P62857 69 aaKnown RBP4.62□□□□□ -1.67
UBE3B-211ENST00000539843 KRTAP5-2Q701N4 177 aa4.57□□□□□ -1.68
UBE3B-211ENST00000539843 KRTAP6-1Q3LI64 71 aa4.56□□□□□ -1.68
UBE3B-211ENST00000539843 ROMO1P60602 79 aa4.54□□□□□ -1.68
UBE3B-211ENST00000539843 AHNAKQ09666 5890 aaKnown RBP4.45□□□□□ -1.7
UBE3B-211ENST00000539843 KRTAP5-8O75690 187 aa4.43□□□□□ -1.7
UBE3B-211ENST00000539843 KRTAP6-2Q3LI66 62 aa4.42□□□□□ -1.7
UBE3B-211ENST00000539843 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
UBE3B-211ENST00000539843 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
UBE3B-211ENST00000539843 MUC5BQ9HC84 5762 aaPredicted RBP4.36□□□□□ -1.71
UBE3B-211ENST00000539843 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
UBE3B-211ENST00000539843 MT3P25713 68 aa4.29□□□□□ -1.72
UBE3B-211ENST00000539843 H3BS24 57 aa4.24□□□□□ -1.73
UBE3B-211ENST00000539843 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
UBE3B-211ENST00000539843 LCE1EQ5T753 118 aa3.95□□□□□ -1.78
UBE3B-211ENST00000539843 PCP4P48539 62 aa3.94□□□□□ -1.78
UBE3B-211ENST00000539843 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
UBE3B-211ENST00000539843 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
UBE3B-211ENST00000539843 BRK1Q8WUW1 75 aa3.74□□□□□ -1.81
UBE3B-211ENST00000539843 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
UBE3B-211ENST00000539843 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
UBE3B-211ENST00000539843 PMAIP1Q13794 54 aa3.5□□□□□ -1.85
UBE3B-211ENST00000539843 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
UBE3B-211ENST00000539843 PRAC1Q96KF2 57 aa3.35□□□□□ -1.87
UBE3B-211ENST00000539843 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
UBE3B-211ENST00000539843 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
UBE3B-211ENST00000539843 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
UBE3B-211ENST00000539843 PRO0628Q9UI54 55 aa3.09□□□□□ -1.91
UBE3B-211ENST00000539843 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
UBE3B-211ENST00000539843 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
UBE3B-211ENST00000539843 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
UBE3B-211ENST00000539843 SVIPQ8NHG7 77 aa2.99□□□□□ -1.93
UBE3B-211ENST00000539843 KTN1-AS1Q86SY8 53 aa2.96□□□□□ -1.94
UBE3B-211ENST00000539843 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
UBE3B-211ENST00000539843 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
UBE3B-211ENST00000539843 PRM1P04553 51 aa2.28□□□□□ -2.04
UBE3B-211ENST00000539843 NDUFAF8A1L188 74 aa2.19□□□□□ -2.06
UBE3B-211ENST00000539843 A0A0A0MQY5 61 aa2.02□□□□□ -2.09
UBE3B-211ENST00000539843 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
UBE3B-211ENST00000539843 INE1O15225 51 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 69.7 ms