RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 UQCR11O14957 56 aa6.76□□□□□ -1.33
TNFRSF1A-212ENST00000539372 TNP1P09430 55 aa6.76□□□□□ -1.33
TNFRSF1A-212ENST00000539372 Q1T7F1 81 aa6.73□□□□□ -1.33
TNFRSF1A-212ENST00000539372 GPR98Q8WXG9 6306 aa6.71□□□□□ -1.33
TNFRSF1A-212ENST00000539372 LCE1DQ5T752 114 aa6.68□□□□□ -1.34
TNFRSF1A-212ENST00000539372 RPS28P62857 69 aaKnown RBP6.67□□□□□ -1.34
TNFRSF1A-212ENST00000539372 KRTAP4-3Q9BYR4 195 aa6.66□□□□□ -1.34
TNFRSF1A-212ENST00000539372 MT4P47944 62 aa6.62□□□□□ -1.35
TNFRSF1A-212ENST00000539372 LCE4AQ5TA78 99 aa6.62□□□□□ -1.35
TNFRSF1A-212ENST00000539372 PSPHP1O15172 72 aa6.61□□□□□ -1.35
TNFRSF1A-212ENST00000539372 MIR22HGQ0VDD5 57 aa6.6□□□□□ -1.35
TNFRSF1A-212ENST00000539372 KRTAP12-3P60328 96 aa6.51□□□□□ -1.37
TNFRSF1A-212ENST00000539372 HMCN1Q96RW7 5635 aa6.49□□□□□ -1.37
TNFRSF1A-212ENST00000539372 KRTAP5-4Q6L8H1 288 aa6.49□□□□□ -1.37
TNFRSF1A-212ENST00000539372 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
TNFRSF1A-212ENST00000539372 K7ERS5 55 aa6.46□□□□□ -1.38
TNFRSF1A-212ENST00000539372 A6NED7 52 aa6.43□□□□□ -1.38
TNFRSF1A-212ENST00000539372 KRTAP4-6Q9BYQ5 205 aa6.41□□□□□ -1.38
TNFRSF1A-212ENST00000539372 KRTAP25-1Q3LHN0 102 aa6.31□□□□□ -1.4
TNFRSF1A-212ENST00000539372 AHNAK2Q8IVF2 5795 aa6.3□□□□□ -1.4
TNFRSF1A-212ENST00000539372 KRTAP5-10Q6L8G5 202 aa6.23□□□□□ -1.41
TNFRSF1A-212ENST00000539372 CDC42SE1Q9NRR8 79 aa6.23□□□□□ -1.41
TNFRSF1A-212ENST00000539372 KRTAP5-5Q701N2 237 aaPredicted RBP6.2□□□□□ -1.42
TNFRSF1A-212ENST00000539372 LOC100996750A0A140TA64 210 aa6.15□□□□□ -1.42
TNFRSF1A-212ENST00000539372 KRTAP20-2Q3LI61 65 aa6.15□□□□□ -1.42
TNFRSF1A-212ENST00000539372 SPRR5A0A1B0GTR4 108 aa6.08□□□□□ -1.44
TNFRSF1A-212ENST00000539372 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
TNFRSF1A-212ENST00000539372 KRTAP12-4P60329 112 aa6.07□□□□□ -1.44
TNFRSF1A-212ENST00000539372 KRTAP5-3Q6L8H2 238 aa6.07□□□□□ -1.44
TNFRSF1A-212ENST00000539372 ROMO1P60602 79 aa6.05□□□□□ -1.44
TNFRSF1A-212ENST00000539372 KRTAP19-4Q3LI73 84 aa6.04□□□□□ -1.44
TNFRSF1A-212ENST00000539372 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
TNFRSF1A-212ENST00000539372 KRTAP5-7Q6L8G8 165 aa5.99□□□□□ -1.45
TNFRSF1A-212ENST00000539372 LCE3CQ5T5A8 94 aa5.98□□□□□ -1.45
TNFRSF1A-212ENST00000539372 SYNE1Q8NF91 8797 aaKnown RBP5.96□□□□□ -1.46
TNFRSF1A-212ENST00000539372 BRK1Q8WUW1 75 aa5.84□□□□□ -1.47
TNFRSF1A-212ENST00000539372 KRTAP6-1Q3LI64 71 aa5.76□□□□□ -1.49
TNFRSF1A-212ENST00000539372 MT1AP04731 61 aa5.75□□□□□ -1.49
TNFRSF1A-212ENST00000539372 KRTAP9-6A8MVA2 160 aa5.67□□□□□ -1.5
TNFRSF1A-212ENST00000539372 KRTAP5-2Q701N4 177 aa5.67□□□□□ -1.5
TNFRSF1A-212ENST00000539372 KRTAP4-11Q9BYQ6 195 aa5.64□□□□□ -1.51
TNFRSF1A-212ENST00000539372 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
TNFRSF1A-212ENST00000539372 PMAIP1Q13794 54 aa5.52□□□□□ -1.53
TNFRSF1A-212ENST00000539372 KRTAP6-2Q3LI66 62 aa5.52□□□□□ -1.53
TNFRSF1A-212ENST00000539372 KRTAP5-8O75690 187 aa5.44□□□□□ -1.54
TNFRSF1A-212ENST00000539372 PRO0628Q9UI54 55 aa5.38□□□□□ -1.55
TNFRSF1A-212ENST00000539372 MT3P25713 68 aa5.26□□□□□ -1.57
TNFRSF1A-212ENST00000539372 OBSCNQ5VST9 7968 aa5.26□□□□□ -1.57
TNFRSF1A-212ENST00000539372 PRAC1Q96KF2 57 aa5.19□□□□□ -1.58
TNFRSF1A-212ENST00000539372 MUC5ACP98088 5654 aa5.18□□□□□ -1.58
TNFRSF1A-212ENST00000539372 KRTAP9-9Q9BYP9 154 aa5.18□□□□□ -1.58
TNFRSF1A-212ENST00000539372 MUC5BQ9HC84 5762 aaPredicted RBP5.16□□□□□ -1.58
TNFRSF1A-212ENST00000539372 AHNAKQ09666 5890 aaKnown RBP5.16□□□□□ -1.58
TNFRSF1A-212ENST00000539372 KRTAP5-1Q6L8H4 278 aa5.11□□□□□ -1.59
TNFRSF1A-212ENST00000539372 KTN1-AS1Q86SY8 53 aa5.08□□□□□ -1.6
TNFRSF1A-212ENST00000539372 LCE1EQ5T753 118 aa4.83□□□□□ -1.64
TNFRSF1A-212ENST00000539372 SVIPQ8NHG7 77 aa4.78□□□□□ -1.64
TNFRSF1A-212ENST00000539372 LCE1BQ5T7P3 118 aa4.63□□□□□ -1.67
TNFRSF1A-212ENST00000539372 KRTAP4-2Q9BYR5 136 aa4.6□□□□□ -1.67
TNFRSF1A-212ENST00000539372 LCE1CQ5T751 118 aa4.49□□□□□ -1.69
TNFRSF1A-212ENST00000539372 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
TNFRSF1A-212ENST00000539372 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
TNFRSF1A-212ENST00000539372 KRTAP4-12Q9BQ66 201 aa4.26□□□□□ -1.73
TNFRSF1A-212ENST00000539372 KRTAP5-11Q6L8G4 156 aa4.08□□□□□ -1.76
TNFRSF1A-212ENST00000539372 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
TNFRSF1A-212ENST00000539372 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
TNFRSF1A-212ENST00000539372 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
TNFRSF1A-212ENST00000539372 KRTAP21-2Q3LI59 83 aa3.78□□□□□ -1.8
TNFRSF1A-212ENST00000539372 NDUFAF8A1L188 74 aa3.77□□□□□ -1.81
TNFRSF1A-212ENST00000539372 PHGR1C9JFL3 82 aa3.65□□□□□ -1.83
TNFRSF1A-212ENST00000539372 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
TNFRSF1A-212ENST00000539372 H3BS24 57 aa3.47□□□□□ -1.85
TNFRSF1A-212ENST00000539372 MUC19Q7Z5P9 8384 aa3.25□□□□□ -1.89
TNFRSF1A-212ENST00000539372 A0A0A0MQY5 61 aa3.17□□□□□ -1.9
TNFRSF1A-212ENST00000539372 INE1O15225 51 aa3.15□□□□□ -1.91
TNFRSF1A-212ENST00000539372 PRM1P04553 51 aa3.08□□□□□ -1.92
TNFRSF1A-212ENST00000539372 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
TNFRSF1A-212ENST00000539372 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 10.8 ms